RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 PKDREJQ9NTG1 2253 aa1.97□□□□□ -2.09
XIST-201ENST00000416330 H3BUA1 57 aa1.97□□□□□ -2.09
XIST-201ENST00000416330 PRLHP81277 87 aa1.97□□□□□ -2.09
XIST-201ENST00000416330 S4R3F8 94 aa1.97□□□□□ -2.09
XIST-201ENST00000416330 DSPP15924 2871 aaKnown RBP1.97□□□□□ -2.09
XIST-201ENST00000416330 CACNA1HO95180 2353 aa1.96□□□□□ -2.09
XIST-201ENST00000416330 SPTBN1Q01082 2364 aaKnown RBP1.96□□□□□ -2.09
XIST-201ENST00000416330 POLR2KP53803 58 aaKnown RBP1.96□□□□□ -2.1
XIST-201ENST00000416330 ZNF292O60281 2723 aa1.95□□□□□ -2.1
XIST-201ENST00000416330 RPL39P62891 51 aaKnown RBP1.95□□□□□ -2.1
XIST-201ENST00000416330 ARHGAP5-AS1Q96IT6 56 aa1.95□□□□□ -2.1
XIST-201ENST00000416330 MMP24-AS1A0A0U1RRL7 71 aa1.94□□□□□ -2.1
XIST-201ENST00000416330 IGF2RP11717 2491 aa1.94□□□□□ -2.1
XIST-201ENST00000416330 DEFB131AP59861 70 aa1.93□□□□□ -2.1
XIST-201ENST00000416330 KNL1Q8NG31 2342 aa1.91□□□□□ -2.1
XIST-201ENST00000416330 PCNX1Q96RV3 2341 aa1.91□□□□□ -2.1
XIST-201ENST00000416330 DEFB106AQ8N104 65 aa1.91□□□□□ -2.1
XIST-201ENST00000416330 TRANK1O15050 2925 aa1.9□□□□□ -2.1
XIST-201ENST00000416330 CELSR2Q9HCU4 2923 aa1.9□□□□□ -2.1
XIST-201ENST00000416330 RPL39LQ96EH5 51 aaKnown RBP1.89□□□□□ -2.11
XIST-201ENST00000416330 GVINP1Q7Z2Y8 2422 aa1.89□□□□□ -2.11
XIST-201ENST00000416330 TTC28Q96AY4 2481 aa1.89□□□□□ -2.11
XIST-201ENST00000416330 TPRP12270 2363 aaKnown RBP1.88□□□□□ -2.11
XIST-201ENST00000416330 MUC6Q6W4X9 2439 aa1.88□□□□□ -2.11
XIST-201ENST00000416330 CHD9Q3L8U1 2897 aa1.88□□□□□ -2.11
XIST-201ENST00000416330 POLQO75417 2590 aa1.87□□□□□ -2.11
XIST-201ENST00000416330 DEFB109BQ30KR1 87 aa1.87□□□□□ -2.11
XIST-201ENST00000416330 PDE4DIPQ5VU43 2346 aa1.86□□□□□ -2.11
XIST-201ENST00000416330 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
XIST-201ENST00000416330 ABCA12Q86UK0 2595 aa1.85□□□□□ -2.11
XIST-201ENST00000416330 TTTY10Q9BZA0 68 aa1.84□□□□□ -2.11
XIST-201ENST00000416330 LEAP2Q969E1 77 aa1.82□□□□□ -2.12
XIST-201ENST00000416330 ABCA2Q9BZC7 2435 aa1.82□□□□□ -2.12
XIST-201ENST00000416330 F8P00451 2351 aa1.8□□□□□ -2.12
XIST-201ENST00000416330 HELZ2Q9BYK8 2649 aaKnown RBP1.79□□□□□ -2.12
XIST-201ENST00000416330 CRCT1Q9UGL9 99 aa1.79□□□□□ -2.12
XIST-201ENST00000416330 NOP10Q9NPE3 64 aaKnown RBP1.77□□□□□ -2.13
XIST-201ENST00000416330 CSMD3Q7Z407 3707 aa1.76□□□□□ -2.13
XIST-201ENST00000416330 CSPG4Q6UVK1 2322 aa1.76□□□□□ -2.13
XIST-201ENST00000416330 SPINK1P00995 79 aa1.76□□□□□ -2.13
XIST-201ENST00000416330 CLPSL2Q6UWE3 100 aa1.76□□□□□ -2.13
XIST-201ENST00000416330 LINC01590Q5TEZ4 76 aa1.75□□□□□ -2.13
XIST-201ENST00000416330 ANK2Q01484 3957 aa1.74□□□□□ -2.13
XIST-201ENST00000416330 A8MTW9 85 aa1.73□□□□□ -2.13
XIST-201ENST00000416330 PRRC2CQ9Y520 2896 aaKnown RBP1.73□□□□□ -2.13
XIST-201ENST00000416330 H3BSH0 61 aa1.72□□□□□ -2.13
XIST-201ENST00000416330 AKAP13Q12802 2813 aa1.71□□□□□ -2.14
XIST-201ENST00000416330 KRTAP4-1Q9BYQ7 146 aa1.7□□□□□ -2.14
XIST-201ENST00000416330 A0A0C4DFX4 3053 aa1.69□□□□□ -2.14
XIST-201ENST00000416330 M0QY20 66 aa1.69□□□□□ -2.14
XIST-201ENST00000416330 AKAP6Q13023 2319 aa1.69□□□□□ -2.14
XIST-201ENST00000416330 TENM4Q6N022 2769 aa1.69□□□□□ -2.14
XIST-201ENST00000416330 ATRQ13535 2644 aa1.69□□□□□ -2.14
XIST-201ENST00000416330 BDP1A6H8Y1 2624 aa1.68□□□□□ -2.14
XIST-201ENST00000416330 PIEZO1Q92508 2521 aa1.67□□□□□ -2.14
XIST-201ENST00000416330 DEFB135Q30KP9 77 aa1.66□□□□□ -2.14
XIST-201ENST00000416330 TOMM7Q9P0U1 55 aa1.66□□□□□ -2.14
XIST-201ENST00000416330 CELSR1Q9NYQ6 3014 aa1.66□□□□□ -2.14
XIST-201ENST00000416330 H0YGG7 62 aa1.65□□□□□ -2.15
XIST-201ENST00000416330 HECTD1Q9ULT8 2610 aa1.65□□□□□ -2.15
XIST-201ENST00000416330 SPINK6Q6UWN8 80 aa1.64□□□□□ -2.15
XIST-201ENST00000416330 SMR3AQ99954 134 aa1.64□□□□□ -2.15
XIST-201ENST00000416330 CHD6Q8TD26 2715 aa1.63□□□□□ -2.15
XIST-201ENST00000416330 VWFP04275 2813 aa1.62□□□□□ -2.15
XIST-201ENST00000416330 PRCDQ00LT1 54 aa1.62□□□□□ -2.15
XIST-201ENST00000416330 DEFB104AQ8WTQ1 72 aa1.61□□□□□ -2.15
XIST-201ENST00000416330 FBN2P35556 2912 aa1.61□□□□□ -2.15
XIST-201ENST00000416330 PKD1L2Q7Z442 2459 aa1.6□□□□□ -2.15
XIST-201ENST00000416330 M0R2T5 61 aa1.6□□□□□ -2.15
XIST-201ENST00000416330 CEP290O15078 2479 aa1.6□□□□□ -2.15
XIST-201ENST00000416330 SRRM2Q9UQ35 2752 aaKnown RBP1.59□□□□□ -2.15
XIST-201ENST00000416330 EP300Q09472 2414 aaPredicted RBP1.58□□□□□ -2.16
XIST-201ENST00000416330 BSNQ9UPA5 3926 aa1.58□□□□□ -2.16
XIST-201ENST00000416330 PRKDCP78527 4128 aaKnown RBP1.57□□□□□ -2.16
XIST-201ENST00000416330 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
XIST-201ENST00000416330 TNRC18O15417 2968 aaPredicted RBP1.56□□□□□ -2.16
XIST-201ENST00000416330 SPTA1P02549 2419 aa1.56□□□□□ -2.16
XIST-201ENST00000416330 KRTAP2-3P0C7H8 128 aa1.55□□□□□ -2.16
XIST-201ENST00000416330 KRTAP2-4Q9BYR9 128 aa1.55□□□□□ -2.16
XIST-201ENST00000416330 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
XIST-201ENST00000416330 OTOGQ6ZRI0 2925 aa1.54□□□□□ -2.16
XIST-201ENST00000416330 UBR5O95071 2799 aaPredicted RBP1.53□□□□□ -2.16
XIST-201ENST00000416330 FRAS1Q86XX4 4008 aa1.53□□□□□ -2.16
XIST-201ENST00000416330 FAT2Q9NYQ8 4349 aa1.53□□□□□ -2.16
XIST-201ENST00000416330 CHD7Q9P2D1 2997 aa1.52□□□□□ -2.17
XIST-201ENST00000416330 M0QZ58 72 aa1.52□□□□□ -2.17
XIST-201ENST00000416330 KRTAP19-3Q7Z4W3 81 aa1.51□□□□□ -2.17
XIST-201ENST00000416330 ZNF469Q96JG9 3925 aaPredicted RBP1.5□□□□□ -2.17
XIST-201ENST00000416330 DNAH11Q96DT5 4516 aa1.5□□□□□ -2.17
XIST-201ENST00000416330 CHD8Q9HCK8 2581 aa1.49□□□□□ -2.17
XIST-201ENST00000416330 APCP25054 2843 aa1.48□□□□□ -2.17
XIST-201ENST00000416330 TNXBP22105 4242 aa1.48□□□□□ -2.17
XIST-201ENST00000416330 U3KQA8 63 aa1.48□□□□□ -2.17
XIST-201ENST00000416330 LYSTQ99698 3801 aa1.48□□□□□ -2.17
XIST-201ENST00000416330 NCOR1O75376 2440 aa1.47□□□□□ -2.17
XIST-201ENST00000416330 MYCBP2O75592 4640 aa1.47□□□□□ -2.17
XIST-201ENST00000416330 PRM1P04553 51 aa1.45□□□□□ -2.18
XIST-201ENST00000416330 PDZD2O15018 2839 aa1.44□□□□□ -2.18
XIST-201ENST00000416330 SACSQ9NZJ4 4579 aa1.44□□□□□ -2.18
XIST-201ENST00000416330 K7EIM0 57 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms