RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 NMUP48645 174 aa5.14□□□□□ -1.59
NEDD9-203ENST00000397378 PMAIP1Q13794 54 aa5.14□□□□□ -1.59
NEDD9-203ENST00000397378 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
NEDD9-203ENST00000397378 C9orf153Q5TBE3 101 aa5.14□□□□□ -1.59
NEDD9-203ENST00000397378 HRCT1Q6UXD1 115 aa5.14□□□□□ -1.59
NEDD9-203ENST00000397378 BAGE3Q86Y29 109 aa5.14□□□□□ -1.59
NEDD9-203ENST00000397378 SMCR5Q8TEV8 140 aa5.14□□□□□ -1.59
NEDD9-203ENST00000397378 FAM236DA0A1B0GTK5 79 aa5.13□□□□□ -1.59
NEDD9-203ENST00000397378 SERF1AO75920 110 aa5.13□□□□□ -1.59
NEDD9-203ENST00000397378 C3orf79P0CE67 100 aa5.13□□□□□ -1.59
NEDD9-203ENST00000397378 SMIM13P0DJ93 91 aa5.13□□□□□ -1.59
NEDD9-203ENST00000397378 FAM236CP0DP71 79 aa5.13□□□□□ -1.59
NEDD9-203ENST00000397378 MOBPQ13875 183 aa5.13□□□□□ -1.59
NEDD9-203ENST00000397378 SFTA2Q6UW10 78 aa5.13□□□□□ -1.59
NEDD9-203ENST00000397378 LINC01546A6NGU7 62 aa5.12□□□□□ -1.59
NEDD9-203ENST00000397378 J3QQQ9 107 aa5.12□□□□□ -1.59
NEDD9-203ENST00000397378 COX8AP10176 69 aa5.12□□□□□ -1.59
NEDD9-203ENST00000397378 ETDBQ3ZM63 59 aa5.12□□□□□ -1.59
NEDD9-203ENST00000397378 GAGE2AQ6NT46 116 aa5.12□□□□□ -1.59
NEDD9-203ENST00000397378 COPS9Q8WXC6 57 aa5.12□□□□□ -1.59
NEDD9-203ENST00000397378 ZNF625Q96I27 306 aaPredicted RBP5.12□□□□□ -1.59
NEDD9-203ENST00000397378 KCNQ1DNQ9H478 68 aa5.12□□□□□ -1.59
NEDD9-203ENST00000397378 E9PLD3 99 aa5.11□□□□□ -1.59
NEDD9-203ENST00000397378 LYRM7Q5U5X0 104 aa5.11□□□□□ -1.59
NEDD9-203ENST00000397378 PRO0461Q9UI25 63 aa5.11□□□□□ -1.59
NEDD9-203ENST00000397378 IGLV9-49A0A0B4J1Y8 123 aa5.1□□□□□ -1.59
NEDD9-203ENST00000397378 ETDCA0A1B0GVM5 59 aa5.1□□□□□ -1.59
NEDD9-203ENST00000397378 CFC1P0CG37 223 aa5.1□□□□□ -1.59
NEDD9-203ENST00000397378 ZNF22P17026 224 aaPredicted RBP5.1□□□□□ -1.59
NEDD9-203ENST00000397378 FLGP20930 4061 aaPredicted RBP5.1□□□□□ -1.59
NEDD9-203ENST00000397378 LINC00310P59036 64 aa5.1□□□□□ -1.59
NEDD9-203ENST00000397378 TRBV20-1A0A075B6N2 111 aa5.09□□□□□ -1.59
NEDD9-203ENST00000397378 TRBV7-7A0A0K0K1E9 115 aa5.09□□□□□ -1.59
NEDD9-203ENST00000397378 A0A1B0GWB2 263 aa5.09□□□□□ -1.59
NEDD9-203ENST00000397378 TRACP01848 142 aa5.09□□□□□ -1.59
NEDD9-203ENST00000397378 TEN1Q86WV5 123 aa5.09□□□□□ -1.59
NEDD9-203ENST00000397378 ANKRD29Q8N6D5 301 aa5.09□□□□□ -1.59
NEDD9-203ENST00000397378 LINC00158P58513 81 aa5.08□□□□□ -1.6
NEDD9-203ENST00000397378 HIGD1BQ9P298 99 aa5.08□□□□□ -1.6
NEDD9-203ENST00000397378 ERC2-IT1O76042 136 aa5.07□□□□□ -1.6
NEDD9-203ENST00000397378 COX7CP15954 63 aa5.06□□□□□ -1.6
NEDD9-203ENST00000397378 C2orf91Q6ZV80 131 aa5.06□□□□□ -1.6
NEDD9-203ENST00000397378 TRBV10-3A0A0K0K1G6 114 aa5.05□□□□□ -1.6
NEDD9-203ENST00000397378 FAM236AA0A1B0GUQ0 79 aa5.05□□□□□ -1.6
NEDD9-203ENST00000397378 FAM236BA0A1B0GV22 79 aa5.05□□□□□ -1.6
NEDD9-203ENST00000397378 FAM240AA0A1B0GVK7 77 aa5.05□□□□□ -1.6
NEDD9-203ENST00000397378 NCR3O14931 201 aa5.05□□□□□ -1.6
NEDD9-203ENST00000397378 SMIM26A0A096LP01 95 aa5.04□□□□□ -1.6
NEDD9-203ENST00000397378 C11orf86A6NJI1 115 aa5.04□□□□□ -1.6
NEDD9-203ENST00000397378 TMEM170BQ5T4T1 132 aa5.04□□□□□ -1.6
NEDD9-203ENST00000397378 LINC01545Q5VT33 79 aa5.04□□□□□ -1.6
NEDD9-203ENST00000397378 Q9BRP9 147 aa5.04□□□□□ -1.6
NEDD9-203ENST00000397378 C9orf92A6NGG3 77 aa5.03□□□□□ -1.6
NEDD9-203ENST00000397378 Q6ZRX8 168 aa5.03□□□□□ -1.6
NEDD9-203ENST00000397378 PRR15Q8IV56 129 aa5.03□□□□□ -1.6
NEDD9-203ENST00000397378 LIMD2Q9BT23 127 aa5.03□□□□□ -1.6
NEDD9-203ENST00000397378 A0A096LNJ9 63 aa5.02□□□□□ -1.61
NEDD9-203ENST00000397378 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
NEDD9-203ENST00000397378 CEND1Q8N111 149 aa5.02□□□□□ -1.61
NEDD9-203ENST00000397378 MIR7-3HGQ8N6C7 128 aa5.02□□□□□ -1.61
NEDD9-203ENST00000397378 SERP1Q9Y6X1 66 aa5.02□□□□□ -1.61
NEDD9-203ENST00000397378 H3BS24 57 aa5.01□□□□□ -1.61
NEDD9-203ENST00000397378 ATOX1O00244 68 aa5.01□□□□□ -1.61
NEDD9-203ENST00000397378 IGLV6-57P01721 117 aa5.01□□□□□ -1.61
NEDD9-203ENST00000397378 SCGB1C2P0DMR2 95 aa5.01□□□□□ -1.61
NEDD9-203ENST00000397378 CHCHD1Q96BP2 118 aaKnown RBP5.01□□□□□ -1.61
NEDD9-203ENST00000397378 TRBV7-6A0A0J9YX20 115 aa5□□□□□ -1.61
NEDD9-203ENST00000397378 ACYP1P07311 99 aa5□□□□□ -1.61
NEDD9-203ENST00000397378 LINC00846Q9NV44 126 aa5□□□□□ -1.61
NEDD9-203ENST00000397378 LOC107984156A0A0G2JMH3 177 aa4.99□□□□□ -1.61
NEDD9-203ENST00000397378 TRBV10-2A0A0K0K1G8 114 aa4.99□□□□□ -1.61
NEDD9-203ENST00000397378 TMEM223A0PJW6 202 aa4.99□□□□□ -1.61
NEDD9-203ENST00000397378 HBDP02042 147 aa4.99□□□□□ -1.61
NEDD9-203ENST00000397378 ARL17AQ8IVW1 177 aa4.99□□□□□ -1.61
NEDD9-203ENST00000397378 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
NEDD9-203ENST00000397378 IGKCP01834 107 aa4.98□□□□□ -1.61
NEDD9-203ENST00000397378 NPC2P61916 151 aa4.98□□□□□ -1.61
NEDD9-203ENST00000397378 RPL37P61927 97 aaKnown RBP4.98□□□□□ -1.61
NEDD9-203ENST00000397378 H3BT86 120 aa4.97□□□□□ -1.61
NEDD9-203ENST00000397378 URB1-AS1Q96HZ7 61 aa4.97□□□□□ -1.61
NEDD9-203ENST00000397378 KRTAP20-1Q3LI63 56 aa4.96□□□□□ -1.62
NEDD9-203ENST00000397378 ST20-AS1Q8NBB2 130 aa4.96□□□□□ -1.62
NEDD9-203ENST00000397378 SPRR1BP22528 89 aa4.95□□□□□ -1.62
NEDD9-203ENST00000397378 ATP5EP56381 51 aaPredicted RBP4.95□□□□□ -1.62
NEDD9-203ENST00000397378 TRAV12-1A0A0B4J245 112 aa4.94□□□□□ -1.62
NEDD9-203ENST00000397378 MYMXA0A1B0GTQ4 84 aa4.94□□□□□ -1.62
NEDD9-203ENST00000397378 LEPROTL1O95214 131 aa4.94□□□□□ -1.62
NEDD9-203ENST00000397378 SCGB1D4Q6XE38 83 aa4.94□□□□□ -1.62
NEDD9-203ENST00000397378 TRAV23DV6A0A075B6W5 121 aa4.93□□□□□ -1.62
NEDD9-203ENST00000397378 ZNF73O43830 326 aaPredicted RBP4.93□□□□□ -1.62
NEDD9-203ENST00000397378 S100A7L2Q5SY68 101 aa4.93□□□□□ -1.62
NEDD9-203ENST00000397378 BRK1Q8WUW1 75 aa4.93□□□□□ -1.62
NEDD9-203ENST00000397378 TCL1BO95988 128 aa4.92□□□□□ -1.62
NEDD9-203ENST00000397378 HIST1H4AP62805 103 aaKnown RBP4.92□□□□□ -1.62
NEDD9-203ENST00000397378 SERP2Q8N6R1 65 aa4.92□□□□□ -1.62
NEDD9-203ENST00000397378 NDUFS5O43920 106 aa4.91□□□□□ -1.62
NEDD9-203ENST00000397378 LINC00643Q86TS7 51 aa4.91□□□□□ -1.62
NEDD9-203ENST00000397378 EIF4EBP3O60516 100 aaPredicted RBP4.9□□□□□ -1.63
NEDD9-203ENST00000397378 IFI27L1Q96BM0 104 aa4.9□□□□□ -1.63
NEDD9-203ENST00000397378 H7C2G1 150 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms