RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TRAV22A0A0B4J277 110 aa7.37□□□□□ -1.23
USP6NL-201ENST00000277575 CASC10Q5T4H9 136 aa7.37□□□□□ -1.23
USP6NL-201ENST00000277575 APLNQ9ULZ1 77 aa7.37□□□□□ -1.23
USP6NL-201ENST00000277575 NSD1Q96L73 2696 aaPredicted RBP7.36□□□□□ -1.23
USP6NL-201ENST00000277575 ZNF861PO60384 105 aa7.35□□□□□ -1.23
USP6NL-201ENST00000277575 NIPBLQ6KC79 2804 aaeCLIP7.35□□□□□ -1.23
USP6NL-201ENST00000277575 NBEAL2Q6ZNJ1 2754 aa7.35□□□□□ -1.23
USP6NL-201ENST00000277575 Q8N377 158 aa7.35□□□□□ -1.23
USP6NL-201ENST00000277575 CR1P17927 2039 aa7.34□□□□□ -1.23
USP6NL-201ENST00000277575 IGFL1Q6UW32 110 aa7.34□□□□□ -1.23
USP6NL-201ENST00000277575 C7orf65Q6ZTY9 151 aa7.34□□□□□ -1.23
USP6NL-201ENST00000277575 PLA2G2DQ9UNK4 145 aa7.33□□□□□ -1.24
USP6NL-201ENST00000277575 A8MWP4 228 aa7.33□□□□□ -1.24
USP6NL-201ENST00000277575 H3BPC8 53 aa7.33□□□□□ -1.24
USP6NL-201ENST00000277575 K7EQZ3 153 aa7.33□□□□□ -1.24
USP6NL-201ENST00000277575 MXRA5Q9NR99 2828 aa7.33□□□□□ -1.24
USP6NL-201ENST00000277575 A0A1W2PNN7 141 aa7.32□□□□□ -1.24
USP6NL-201ENST00000277575 SSBP3-AS1Q7Z2R9 100 aa7.31□□□□□ -1.24
USP6NL-201ENST00000277575 ACYP2P14621 99 aa7.31□□□□□ -1.24
USP6NL-201ENST00000277575 PMAIP1Q13794 54 aa7.31□□□□□ -1.24
USP6NL-201ENST00000277575 CNBPP62633 177 aaKnown RBP7.31□□□□□ -1.24
USP6NL-201ENST00000277575 Q96NJ1 140 aa7.31□□□□□ -1.24
USP6NL-201ENST00000277575 WIPF1O43516 503 aa7.3□□□□□ -1.24
USP6NL-201ENST00000277575 C8orf87E5RJ46 101 aa7.29□□□□□ -1.24
USP6NL-201ENST00000277575 SMR3BP02814 79 aaPredicted RBP7.29□□□□□ -1.24
USP6NL-201ENST00000277575 A0A0G2JQZ4 141 aa7.29□□□□□ -1.24
USP6NL-201ENST00000277575 MRPL34Q9BQ48 92 aaKnown RBP7.28□□□□□ -1.24
USP6NL-201ENST00000277575 PSORS1C2Q9UIG4 136 aa7.28□□□□□ -1.24
USP6NL-201ENST00000277575 ERC2-IT1O76042 136 aa7.27□□□□□ -1.25
USP6NL-201ENST00000277575 C1orf195Q5TG92 126 aa7.27□□□□□ -1.25
USP6NL-201ENST00000277575 ANAPC11Q9NYG5 84 aa7.27□□□□□ -1.25
USP6NL-201ENST00000277575 PRR15Q8IV56 129 aa7.26□□□□□ -1.25
USP6NL-201ENST00000277575 A0A1B0GU69 56 aa7.25□□□□□ -1.25
USP6NL-201ENST00000277575 LOC101927531A0A1B0GV80 90 aa7.25□□□□□ -1.25
USP6NL-201ENST00000277575 IGLV7-43P04211 117 aa7.25□□□□□ -1.25
USP6NL-201ENST00000277575 ATP11AUNQ6ZP68 121 aa7.25□□□□□ -1.25
USP6NL-201ENST00000277575 LINC00304Q8N9R0 145 aa7.25□□□□□ -1.25
USP6NL-201ENST00000277575 STAB2Q8WWQ8 2551 aa7.25□□□□□ -1.25
USP6NL-201ENST00000277575 J3QL48 77 aa7.24□□□□□ -1.25
USP6NL-201ENST00000277575 LINC00336Q6ZUF6 198 aa7.24□□□□□ -1.25
USP6NL-201ENST00000277575 SPAG11AQ6PDA7 123 aa7.24□□□□□ -1.25
USP6NL-201ENST00000277575 NF1P21359 2839 aa7.23□□□□□ -1.25
USP6NL-201ENST00000277575 C8orf17Q9NRJ1 99 aa7.23□□□□□ -1.25
USP6NL-201ENST00000277575 FAM104AQ969W3 186 aa7.22□□□□□ -1.25
USP6NL-201ENST00000277575 SPRR4Q96PI1 79 aa7.22□□□□□ -1.25
USP6NL-201ENST00000277575 ITPR2Q14571 2701 aa7.22□□□□□ -1.25
USP6NL-201ENST00000277575 DSCR10P59022 87 aa7.21□□□□□ -1.25
USP6NL-201ENST00000277575 A0A1W2PNM2 257 aa7.21□□□□□ -1.26
USP6NL-201ENST00000277575 A0A1B0GVX0 72 aa7.2□□□□□ -1.26
USP6NL-201ENST00000277575 RPS28P62857 69 aaKnown RBP7.2□□□□□ -1.26
USP6NL-201ENST00000277575 TNP2Q05952 138 aa7.2□□□□□ -1.26
USP6NL-201ENST00000277575 IGLV5-37A0A075B6J1 123 aa7.2□□□□□ -1.26
USP6NL-201ENST00000277575 OBSCN-AS1Q96MR7 158 aa7.18□□□□□ -1.26
USP6NL-201ENST00000277575 IGLV5-48A0A075B6I7 105 aa7.16□□□□□ -1.26
USP6NL-201ENST00000277575 FLG2Q5D862 2391 aaPredicted RBP7.15□□□□□ -1.27
USP6NL-201ENST00000277575 C9orf92A6NGG3 77 aa7.14□□□□□ -1.27
USP6NL-201ENST00000277575 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.13□□□□□ -1.27
USP6NL-201ENST00000277575 IGLV8-61A0A075B6I0 122 aa7.13□□□□□ -1.27
USP6NL-201ENST00000277575 KLKP1Q107X0 134 aa7.13□□□□□ -1.27
USP6NL-201ENST00000277575 APCP25054 2843 aa7.12□□□□□ -1.27
USP6NL-201ENST00000277575 C4orf26Q17RF5 130 aa7.11□□□□□ -1.27
USP6NL-201ENST00000277575 COA5Q86WW8 74 aa7.1□□□□□ -1.27
USP6NL-201ENST00000277575 HIVEP1P15822 2718 aa7.1□□□□□ -1.27
USP6NL-201ENST00000277575 PRO0628Q9UI54 55 aa7.09□□□□□ -1.27
USP6NL-201ENST00000277575 OTOGQ6ZRI0 2925 aa7.09□□□□□ -1.27
USP6NL-201ENST00000277575 DMBT1Q9UGM3 2413 aaPredicted RBP7.07□□□□□ -1.28
USP6NL-201ENST00000277575 COX6B2Q6YFQ2 88 aa7.07□□□□□ -1.28
USP6NL-201ENST00000277575 LINC01600Q96MT4 127 aa7.06□□□□□ -1.28
USP6NL-201ENST00000277575 PDZD2O15018 2839 aa7.06□□□□□ -1.28
USP6NL-201ENST00000277575 Q8NDZ9 215 aa7.05□□□□□ -1.28
USP6NL-201ENST00000277575 KMT2BQ9UMN6 2715 aaPredicted RBP7.05□□□□□ -1.28
USP6NL-201ENST00000277575 A8MUN3 132 aa7.05□□□□□ -1.28
USP6NL-201ENST00000277575 H7BZZ5 65 aa7.04□□□□□ -1.28
USP6NL-201ENST00000277575 KRTAP1-5Q9BYS1 174 aa7.02□□□□□ -1.28
USP6NL-201ENST00000277575 ANK2Q01484 3957 aa7.02□□□□□ -1.29
USP6NL-201ENST00000277575 SPRR1AP35321 89 aa7.01□□□□□ -1.29
USP6NL-201ENST00000277575 PRR26Q8N8Z3 221 aa7.01□□□□□ -1.29
USP6NL-201ENST00000277575 PLAC8Q9NZF1 115 aa7.01□□□□□ -1.29
USP6NL-201ENST00000277575 CD164Q04900 197 aa7□□□□□ -1.29
USP6NL-201ENST00000277575 UQCR11O14957 56 aa6.99□□□□□ -1.29
USP6NL-201ENST00000277575 ANK3Q12955 4377 aaKnown RBP6.99□□□□□ -1.29
USP6NL-201ENST00000277575 TRRAPQ9Y4A5 3859 aa6.99□□□□□ -1.29
USP6NL-201ENST00000277575 VWFP04275 2813 aa6.98□□□□□ -1.29
USP6NL-201ENST00000277575 CYP4F30PQ9H0H9 118 aa6.98□□□□□ -1.29
USP6NL-201ENST00000277575 KRTAP26-1Q6PEX3 210 aa6.97□□□□□ -1.29
USP6NL-201ENST00000277575 FAM229BQ4G0N7 80 aa6.96□□□□□ -1.29
USP6NL-201ENST00000277575 OCR1Q9BZK8 76 aa6.96□□□□□ -1.3
USP6NL-201ENST00000277575 Q8N1X5 172 aa6.95□□□□□ -1.3
USP6NL-201ENST00000277575 RBM12B-AS1Q9P1G2 102 aa6.94□□□□□ -1.3
USP6NL-201ENST00000277575 SPANXA2-OT1Q8N9U9 137 aa6.94□□□□□ -1.3
USP6NL-201ENST00000277575 IGLV7-46A0A075B6I9 117 aa6.91□□□□□ -1.3
USP6NL-201ENST00000277575 SPRR1BP22528 89 aa6.91□□□□□ -1.3
USP6NL-201ENST00000277575 TENM1Q9UKZ4 2725 aa6.9□□□□□ -1.31
USP6NL-201ENST00000277575 CSMD3Q7Z407 3707 aa6.89□□□□□ -1.31
USP6NL-201ENST00000277575 MIR22HGQ0VDD5 57 aa6.89□□□□□ -1.31
USP6NL-201ENST00000277575 Q6ZSA8 131 aa6.86□□□□□ -1.31
USP6NL-201ENST00000277575 MMP24-AS1A0A0U1RRL7 71 aa6.86□□□□□ -1.31
USP6NL-201ENST00000277575 LCE6AA0A183 80 aa6.85□□□□□ -1.31
USP6NL-201ENST00000277575 KRTAP10-2P60368 255 aa6.85□□□□□ -1.31
USP6NL-201ENST00000277575 KRTAP10-1P60331 282 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms