RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 K7EQZ3 153 aa13.25□□□□□ -0.29
CACNA1A-257ENST00000638009 FAM218AQ96MZ4 157 aa13.22□□□□□ -0.29
CACNA1A-257ENST00000638009 SMCPP49901 116 aaPredicted RBP13.22□□□□□ -0.29
CACNA1A-257ENST00000638009 NOTCH1P46531 2555 aa13.2□□□□□ -0.3
CACNA1A-257ENST00000638009 STAB2Q8WWQ8 2551 aa13.19□□□□□ -0.3
CACNA1A-257ENST00000638009 RTL8CO15255 209 aa13.19□□□□□ -0.3
CACNA1A-257ENST00000638009 A0A1B0GVX0 72 aa13.18□□□□□ -0.3
CACNA1A-257ENST00000638009 ITPR3Q14573 2671 aa13.16□□□□□ -0.3
CACNA1A-257ENST00000638009 LINC00336Q6ZUF6 198 aa13.16□□□□□ -0.3
CACNA1A-257ENST00000638009 CHTF8P0CG12 524 aa13.15□□□□□ -0.3
CACNA1A-257ENST00000638009 FLNAP21333 2647 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-257ENST00000638009 J3QL48 77 aa13.14□□□□□ -0.31
CACNA1A-257ENST00000638009 PHF5AQ7RTV0 110 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-257ENST00000638009 FAM104AQ969W3 186 aa13.13□□□□□ -0.31
CACNA1A-257ENST00000638009 CHD6Q8TD26 2715 aa13.12□□□□□ -0.31
CACNA1A-257ENST00000638009 LINC00304Q8N9R0 145 aa13.11□□□□□ -0.31
CACNA1A-257ENST00000638009 FLNBO75369 2602 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-257ENST00000638009 DNAH10OSP0CZ25 163 aa13.09□□□□□ -0.31
CACNA1A-257ENST00000638009 KMT2BQ9UMN6 2715 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-257ENST00000638009 AVPP01185 164 aa13.08□□□□□ -0.31
CACNA1A-257ENST00000638009 COL6A5A8TX70 2615 aa13.08□□□□□ -0.32
CACNA1A-257ENST00000638009 H7BZZ5 65 aa13.08□□□□□ -0.32
CACNA1A-257ENST00000638009 NBDYA0A0U1RRE5 68 aa13.08□□□□□ -0.32
CACNA1A-257ENST00000638009 UNC79Q9P2D8 2635 aa13.08□□□□□ -0.32
CACNA1A-257ENST00000638009 DMAC1Q96GE9 116 aa13.07□□□□□ -0.32
CACNA1A-257ENST00000638009 KCNQ1DNQ9H478 68 aa13.07□□□□□ -0.32
CACNA1A-257ENST00000638009 OBSCN-AS1Q96MR7 158 aa13.05□□□□□ -0.32
CACNA1A-257ENST00000638009 IGLV5-37A0A075B6J1 123 aa13.05□□□□□ -0.32
CACNA1A-257ENST00000638009 LINC00315P59091 139 aa13.03□□□□□ -0.32
CACNA1A-257ENST00000638009 WISP2O76076 250 aa13.01□□□□□ -0.33
CACNA1A-257ENST00000638009 A0A0D9SG42 100 aa13□□□□□ -0.33
CACNA1A-257ENST00000638009 CAMK2N1Q7Z7J9 78 aa12.99□□□□□ -0.33
CACNA1A-257ENST00000638009 ZNF861PO60384 105 aa12.96□□□□□ -0.33
CACNA1A-257ENST00000638009 IGFL1Q6UW32 110 aa12.96□□□□□ -0.33
CACNA1A-257ENST00000638009 WIPF1O43516 503 aa12.96□□□□□ -0.33
CACNA1A-257ENST00000638009 TEX15Q9BXT5 2789 aa12.95□□□□□ -0.34
CACNA1A-257ENST00000638009 IGLV5-48A0A075B6I7 105 aa12.94□□□□□ -0.34
CACNA1A-257ENST00000638009 DSCR10P59022 87 aa12.94□□□□□ -0.34
CACNA1A-257ENST00000638009 LINC00528Q8N1L1 170 aa12.92□□□□□ -0.34
CACNA1A-257ENST00000638009 H3BS24 57 aa12.91□□□□□ -0.34
CACNA1A-257ENST00000638009 HRES1P13985 223 aa12.91□□□□□ -0.34
CACNA1A-257ENST00000638009 C15orf56Q8N910 161 aa12.9□□□□□ -0.34
CACNA1A-257ENST00000638009 SMR3AQ99954 134 aa12.9□□□□□ -0.34
CACNA1A-257ENST00000638009 LINC00588Q9Y4M8 146 aa12.9□□□□□ -0.35
CACNA1A-257ENST00000638009 IGLV1-50A0A075B6I6 118 aa12.89□□□□□ -0.35
CACNA1A-257ENST00000638009 Q75L30 129 aa12.88□□□□□ -0.35
CACNA1A-257ENST00000638009 HELZ2Q9BYK8 2649 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-257ENST00000638009 PLA2G2DQ9UNK4 145 aa12.88□□□□□ -0.35
CACNA1A-257ENST00000638009 COL4A2P08572 1712 aa12.86□□□□□ -0.35
CACNA1A-257ENST00000638009 A0A1B0GU33 70 aa12.84□□□□□ -0.35
CACNA1A-257ENST00000638009 FAM168BA1KXE4 195 aa12.82□□□□□ -0.36
CACNA1A-257ENST00000638009 GCN1Q92616 2671 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-257ENST00000638009 Q8NAQ8 132 aa12.81□□□□□ -0.36
CACNA1A-257ENST00000638009 LITAFQ99732 161 aa12.8□□□□□ -0.36
CACNA1A-257ENST00000638009 C9orf92A6NGG3 77 aa12.79□□□□□ -0.36
CACNA1A-257ENST00000638009 Q8N377 158 aa12.78□□□□□ -0.36
CACNA1A-257ENST00000638009 TLX1NBP0CAT3 122 aa12.76□□□□□ -0.37
CACNA1A-257ENST00000638009 ZNF575Q86XF7 245 aa12.75□□□□□ -0.37
CACNA1A-257ENST00000638009 WWC2-AS2Q96NR7 200 aa12.75□□□□□ -0.37
CACNA1A-257ENST00000638009 TEP1Q99973 2627 aaKnown RBP12.74□□□□□ -0.37
CACNA1A-257ENST00000638009 C9orf163Q8N9P6 203 aa12.74□□□□□ -0.37
CACNA1A-257ENST00000638009 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-257ENST00000638009 TNP2Q05952 138 aa12.7□□□□□ -0.38
CACNA1A-257ENST00000638009 Q8N1X5 172 aa12.68□□□□□ -0.38
CACNA1A-257ENST00000638009 CEP350Q5VT06 3117 aa12.67□□□□□ -0.38
CACNA1A-257ENST00000638009 IGLV7-46A0A075B6I9 117 aa12.66□□□□□ -0.38
CACNA1A-257ENST00000638009 CDSNQ15517 529 aa12.66□□□□□ -0.38
CACNA1A-257ENST00000638009 SRCAPQ6ZRS2 3230 aa12.65□□□□□ -0.38
CACNA1A-257ENST00000638009 PRR34Q9NV39 138 aa12.64□□□□□ -0.39
CACNA1A-257ENST00000638009 Q6ZSA8 131 aa12.62□□□□□ -0.39
CACNA1A-257ENST00000638009 IGLV7-43P04211 117 aa12.61□□□□□ -0.39
CACNA1A-257ENST00000638009 ITPR2Q14571 2701 aa12.61□□□□□ -0.39
CACNA1A-257ENST00000638009 OCR1Q9BZK8 76 aa12.61□□□□□ -0.39
CACNA1A-257ENST00000638009 SPINK7P58062 85 aa12.6□□□□□ -0.39
CACNA1A-257ENST00000638009 SPRR4Q96PI1 79 aa12.59□□□□□ -0.39
CACNA1A-257ENST00000638009 KRTAP10-9P60411 292 aa12.58□□□□□ -0.4
CACNA1A-257ENST00000638009 LINC01558Q9Y6Z2 57 aa12.56□□□□□ -0.4
CACNA1A-257ENST00000638009 APCP25054 2843 aa12.55□□□□□ -0.4
CACNA1A-257ENST00000638009 ASB16-AS1Q495Z4 193 aa12.54□□□□□ -0.4
CACNA1A-257ENST00000638009 UTP20O75691 2785 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-257ENST00000638009 CNBPP62633 177 aaKnown RBP12.52□□□□□ -0.4
CACNA1A-257ENST00000638009 CSAG1Q6PB30 78 aa12.52□□□□□ -0.4
CACNA1A-257ENST00000638009 M0R2T5 61 aa12.5□□□□□ -0.41
CACNA1A-257ENST00000638009 S4R3F8 94 aa12.49□□□□□ -0.41
CACNA1A-257ENST00000638009 PSORS1C2Q9UIG4 136 aa12.48□□□□□ -0.41
CACNA1A-257ENST00000638009 A0A087WTM6 91 aa12.47□□□□□ -0.41
CACNA1A-257ENST00000638009 PRR26Q8N8Z3 221 aa12.45□□□□□ -0.42
CACNA1A-257ENST00000638009 IGSF10Q6WRI0 2623 aa12.45□□□□□ -0.42
CACNA1A-257ENST00000638009 MAP1AP78559 2803 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-257ENST00000638009 KRTAP16-1A8MUX0 517 aa12.43□□□□□ -0.42
CACNA1A-257ENST00000638009 A0A1W2PPR1 153 aa12.43□□□□□ -0.42
CACNA1A-257ENST00000638009 R4GN34 69 aa12.43□□□□□ -0.42
CACNA1A-257ENST00000638009 ROMO1P60602 79 aa12.42□□□□□ -0.42
CACNA1A-257ENST00000638009 KLK9Q2XQG4 91 aa12.41□□□□□ -0.42
CACNA1A-257ENST00000638009 SETXQ7Z333 2677 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-257ENST00000638009 PCNTO95613 3336 aa12.4□□□□□ -0.42
CACNA1A-257ENST00000638009 Q8N9P0 234 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-257ENST00000638009 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-257ENST00000638009 FAM229BQ4G0N7 80 aa12.38□□□□□ -0.43
CACNA1A-257ENST00000638009 A0A1W2PNM2 257 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms