RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 CDSNQ15517 529 aa12.25□□□□□ -0.45
CACNA1A-247ENST00000637769 K7EQZ3 153 aa12.23□□□□□ -0.45
CACNA1A-247ENST00000637769 CHTF8P0CG12 524 aa12.23□□□□□ -0.45
CACNA1A-247ENST00000637769 PRR15Q8IV56 129 aa12.22□□□□□ -0.45
CACNA1A-247ENST00000637769 RBM12B-AS1Q9P1G2 102 aa12.21□□□□□ -0.46
CACNA1A-247ENST00000637769 SPANXA2-OT1Q8N9U9 137 aa12.2□□□□□ -0.46
CACNA1A-247ENST00000637769 J3QL48 77 aa12.2□□□□□ -0.46
CACNA1A-247ENST00000637769 LCA10Q71F78 164 aa12.19□□□□□ -0.46
CACNA1A-247ENST00000637769 KCNQ1DNQ9H478 68 aa12.19□□□□□ -0.46
CACNA1A-247ENST00000637769 A0A1B0GVX0 72 aa12.18□□□□□ -0.46
CACNA1A-247ENST00000637769 DMBT1Q9UGM3 2413 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-247ENST00000637769 A8MUN3 132 aa12.17□□□□□ -0.46
CACNA1A-247ENST00000637769 LINC00304Q8N9R0 145 aa12.17□□□□□ -0.46
CACNA1A-247ENST00000637769 C9orf129Q5T035 196 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-247ENST00000637769 ITPR3Q14573 2671 aa12.15□□□□□ -0.46
CACNA1A-247ENST00000637769 KRTAP10-9P60411 292 aa12.15□□□□□ -0.46
CACNA1A-247ENST00000637769 PRO3102Q9H379 93 aa12.15□□□□□ -0.46
CACNA1A-247ENST00000637769 LINC00588Q9Y4M8 146 aa12.12□□□□□ -0.47
CACNA1A-247ENST00000637769 Q8NAQ8 132 aa12.12□□□□□ -0.47
CACNA1A-247ENST00000637769 C8orf17Q9NRJ1 99 aa12.11□□□□□ -0.47
CACNA1A-247ENST00000637769 LINC00483Q53H64 154 aa12.09□□□□□ -0.47
CACNA1A-247ENST00000637769 HELZ2Q9BYK8 2649 aaKnown RBP12.08□□□□□ -0.47
CACNA1A-247ENST00000637769 ZNF861PO60384 105 aa12.08□□□□□ -0.48
CACNA1A-247ENST00000637769 IGLV1-50A0A075B6I6 118 aa12.07□□□□□ -0.48
CACNA1A-247ENST00000637769 LINC00528Q8N1L1 170 aa12.06□□□□□ -0.48
CACNA1A-247ENST00000637769 OBSCN-AS1Q96MR7 158 aa12.06□□□□□ -0.48
CACNA1A-247ENST00000637769 WWC2-AS2Q96NR7 200 aa12.06□□□□□ -0.48
CACNA1A-247ENST00000637769 CHD6Q8TD26 2715 aa12.06□□□□□ -0.48
CACNA1A-247ENST00000637769 IGFL1Q6UW32 110 aa12.05□□□□□ -0.48
CACNA1A-247ENST00000637769 NOTCH1P46531 2555 aa12.04□□□□□ -0.48
CACNA1A-247ENST00000637769 PLA2G2DQ9UNK4 145 aa12.04□□□□□ -0.48
CACNA1A-247ENST00000637769 A0A1W2PPR1 153 aa12.03□□□□□ -0.48
CACNA1A-247ENST00000637769 FAM104AQ969W3 186 aa12.02□□□□□ -0.49
CACNA1A-247ENST00000637769 C10orf142B7Z368 130 aa12.01□□□□□ -0.49
CACNA1A-247ENST00000637769 LITAFQ99732 161 aa12.01□□□□□ -0.49
CACNA1A-247ENST00000637769 UNC79Q9P2D8 2635 aa12□□□□□ -0.49
CACNA1A-247ENST00000637769 CSNK1G2-AS1Q8NCQ2 148 aa12□□□□□ -0.49
CACNA1A-247ENST00000637769 H7BZZ5 65 aa11.99□□□□□ -0.49
CACNA1A-247ENST00000637769 IGLV5-37A0A075B6J1 123 aa11.99□□□□□ -0.49
CACNA1A-247ENST00000637769 Q1T7F1 81 aa11.99□□□□□ -0.49
CACNA1A-247ENST00000637769 FAM168BA1KXE4 195 aa11.99□□□□□ -0.49
CACNA1A-247ENST00000637769 DSCR10P59022 87 aa11.97□□□□□ -0.49
CACNA1A-247ENST00000637769 TEX15Q9BXT5 2789 aa11.97□□□□□ -0.49
CACNA1A-247ENST00000637769 TLX1NBP0CAT3 122 aa11.97□□□□□ -0.49
CACNA1A-247ENST00000637769 C15orf56Q8N910 161 aa11.96□□□□□ -0.5
CACNA1A-247ENST00000637769 KMT2BQ9UMN6 2715 aaPredicted RBP11.95□□□□□ -0.5
CACNA1A-247ENST00000637769 LINC00336Q6ZUF6 198 aa11.93□□□□□ -0.5
CACNA1A-247ENST00000637769 COL6A5A8TX70 2615 aa11.92□□□□□ -0.5
CACNA1A-247ENST00000637769 PRR34Q9NV39 138 aa11.92□□□□□ -0.5
CACNA1A-247ENST00000637769 KLK9Q2XQG4 91 aa11.9□□□□□ -0.5
CACNA1A-247ENST00000637769 EP400Q96L91 3159 aa11.9□□□□□ -0.5
CACNA1A-247ENST00000637769 Q8N377 158 aa11.9□□□□□ -0.5
CACNA1A-247ENST00000637769 STAB2Q8WWQ8 2551 aa11.88□□□□□ -0.51
CACNA1A-247ENST00000637769 A0A0A0MQY5 61 aa11.87□□□□□ -0.51
CACNA1A-247ENST00000637769 WIPF1O43516 503 aa11.86□□□□□ -0.51
CACNA1A-247ENST00000637769 C9orf92A6NGG3 77 aa11.84□□□□□ -0.51
CACNA1A-247ENST00000637769 GCN1Q92616 2671 aaKnown RBP11.83□□□□□ -0.52
CACNA1A-247ENST00000637769 A0A0D9SG42 100 aa11.83□□□□□ -0.52
CACNA1A-247ENST00000637769 IGLV5-48A0A075B6I7 105 aa11.8□□□□□ -0.52
CACNA1A-247ENST00000637769 IGLV7-43P04211 117 aa11.8□□□□□ -0.52
CACNA1A-247ENST00000637769 C9orf163Q8N9P6 203 aa11.8□□□□□ -0.52
CACNA1A-247ENST00000637769 H3BS24 57 aa11.78□□□□□ -0.52
CACNA1A-247ENST00000637769 CNBPP62633 177 aaKnown RBP11.77□□□□□ -0.52
CACNA1A-247ENST00000637769 CAMK2N1Q7Z7J9 78 aa11.77□□□□□ -0.53
CACNA1A-247ENST00000637769 BAHCC1Q9P281 2608 aa11.76□□□□□ -0.53
CACNA1A-247ENST00000637769 SPRR4Q96PI1 79 aa11.76□□□□□ -0.53
CACNA1A-247ENST00000637769 HRES1P13985 223 aa11.75□□□□□ -0.53
CACNA1A-247ENST00000637769 A0A087WTM6 91 aa11.75□□□□□ -0.53
CACNA1A-247ENST00000637769 CEP350Q5VT06 3117 aa11.74□□□□□ -0.53
CACNA1A-247ENST00000637769 KRTAP24-1Q3LI83 254 aa11.74□□□□□ -0.53
CACNA1A-247ENST00000637769 Q75L30 129 aa11.73□□□□□ -0.53
CACNA1A-247ENST00000637769 A0A1B0GU33 70 aa11.72□□□□□ -0.53
CACNA1A-247ENST00000637769 DMAC1Q96GE9 116 aa11.72□□□□□ -0.53
CACNA1A-247ENST00000637769 PSORS1C2Q9UIG4 136 aa11.68□□□□□ -0.54
CACNA1A-247ENST00000637769 TEP1Q99973 2627 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-247ENST00000637769 Q8N1X5 172 aa11.67□□□□□ -0.54
CACNA1A-247ENST00000637769 Q6ZSA8 131 aa11.66□□□□□ -0.54
CACNA1A-247ENST00000637769 IGLV7-46A0A075B6I9 117 aa11.64□□□□□ -0.55
CACNA1A-247ENST00000637769 OCR1Q9BZK8 76 aa11.63□□□□□ -0.55
CACNA1A-247ENST00000637769 LINC00612Q8N6U2 182 aa11.62□□□□□ -0.55
CACNA1A-247ENST00000637769 ZNF575Q86XF7 245 aa11.61□□□□□ -0.55
CACNA1A-247ENST00000637769 C19orf73Q9NVV2 129 aa11.61□□□□□ -0.55
CACNA1A-247ENST00000637769 K7EIL1 84 aa11.57□□□□□ -0.56
CACNA1A-247ENST00000637769 ITPR2Q14571 2701 aa11.56□□□□□ -0.56
CACNA1A-247ENST00000637769 FAM229BQ4G0N7 80 aa11.56□□□□□ -0.56
CACNA1A-247ENST00000637769 TNP2Q05952 138 aa11.55□□□□□ -0.56
CACNA1A-247ENST00000637769 SETXQ7Z333 2677 aaKnown RBP11.55□□□□□ -0.56
CACNA1A-247ENST00000637769 GOLGB1Q14789 3259 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-247ENST00000637769 A0A1W2PNM2 257 aa11.53□□□□□ -0.56
CACNA1A-247ENST00000637769 CSAG1Q6PB30 78 aa11.52□□□□□ -0.57
CACNA1A-247ENST00000637769 DNAH12Q6ZR08 3092 aa11.5□□□□□ -0.57
CACNA1A-247ENST00000637769 MAP1AP78559 2803 aaPredicted RBP11.5□□□□□ -0.57
CACNA1A-247ENST00000637769 KRTAP10-11P60412 298 aa11.5□□□□□ -0.57
CACNA1A-247ENST00000637769 M0R2T5 61 aa11.49□□□□□ -0.57
CACNA1A-247ENST00000637769 PRR26Q8N8Z3 221 aa11.49□□□□□ -0.57
CACNA1A-247ENST00000637769 ZNF292O60281 2723 aa11.48□□□□□ -0.57
CACNA1A-247ENST00000637769 EIF4EBP3O60516 100 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-247ENST00000637769 A0A1W2PNN7 141 aa11.47□□□□□ -0.57
CACNA1A-247ENST00000637769 S4R3F8 94 aa11.47□□□□□ -0.57
CACNA1A-247ENST00000637769 ANAPC11Q9NYG5 84 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms