RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 WWC2-AS2Q96NR7 200 aa12.86□□□□□ -0.35
CACNA1A-246ENST00000637736 Q8NAQ8 132 aa12.83□□□□□ -0.36
CACNA1A-246ENST00000637736 CDC42SE1Q9NRR8 79 aa12.83□□□□□ -0.36
CACNA1A-246ENST00000637736 ERC2-IT1O76042 136 aa12.82□□□□□ -0.36
CACNA1A-246ENST00000637736 C10orf142B7Z368 130 aa12.8□□□□□ -0.36
CACNA1A-246ENST00000637736 ZNF575Q86XF7 245 aa12.74□□□□□ -0.37
CACNA1A-246ENST00000637736 SMCPP49901 116 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-246ENST00000637736 SMR3BP02814 79 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-246ENST00000637736 CSNK1G2-AS1Q8NCQ2 148 aa12.72□□□□□ -0.37
CACNA1A-246ENST00000637736 KRTAP24-1Q3LI83 254 aa12.71□□□□□ -0.38
CACNA1A-246ENST00000637736 C8orf17Q9NRJ1 99 aa12.71□□□□□ -0.38
CACNA1A-246ENST00000637736 IGLV5-48A0A075B6I7 105 aa12.7□□□□□ -0.38
CACNA1A-246ENST00000637736 A0A1B0GVX0 72 aa12.69□□□□□ -0.38
CACNA1A-246ENST00000637736 LINC00483Q53H64 154 aa12.69□□□□□ -0.38
CACNA1A-246ENST00000637736 PRO0461Q9UI25 63 aa12.68□□□□□ -0.38
CACNA1A-246ENST00000637736 KCNQ1DNQ9H478 68 aa12.68□□□□□ -0.38
CACNA1A-246ENST00000637736 IGFL1Q6UW32 110 aa12.66□□□□□ -0.38
CACNA1A-246ENST00000637736 PRR15Q8IV56 129 aa12.66□□□□□ -0.38
CACNA1A-246ENST00000637736 ZNF861PO60384 105 aa12.66□□□□□ -0.38
CACNA1A-246ENST00000637736 IGLV1-50A0A075B6I6 118 aa12.65□□□□□ -0.38
CACNA1A-246ENST00000637736 M0R2T5 61 aa12.64□□□□□ -0.39
CACNA1A-246ENST00000637736 CAMK2N1Q7Z7J9 78 aa12.62□□□□□ -0.39
CACNA1A-246ENST00000637736 KTN1-AS1Q86SY8 53 aa12.6□□□□□ -0.39
CACNA1A-246ENST00000637736 Q8N1X5 172 aa12.6□□□□□ -0.39
CACNA1A-246ENST00000637736 LCA10Q71F78 164 aa12.58□□□□□ -0.39
CACNA1A-246ENST00000637736 FAM104AQ969W3 186 aa12.58□□□□□ -0.4
CACNA1A-246ENST00000637736 CD164Q04900 197 aa12.58□□□□□ -0.4
CACNA1A-246ENST00000637736 ANAPC11Q9NYG5 84 aa12.57□□□□□ -0.4
CACNA1A-246ENST00000637736 GOLGB1Q14789 3259 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-246ENST00000637736 LINC00528Q8N1L1 170 aa12.53□□□□□ -0.4
CACNA1A-246ENST00000637736 LINC00336Q6ZUF6 198 aa12.53□□□□□ -0.4
CACNA1A-246ENST00000637736 PLA2G2DQ9UNK4 145 aa12.51□□□□□ -0.41
CACNA1A-246ENST00000637736 LITAFQ99732 161 aa12.51□□□□□ -0.41
CACNA1A-246ENST00000637736 A0A0G2JQZ4 141 aa12.5□□□□□ -0.41
CACNA1A-246ENST00000637736 A0A1W2PNN7 141 aa12.5□□□□□ -0.41
CACNA1A-246ENST00000637736 KLKP1Q107X0 134 aa12.49□□□□□ -0.41
CACNA1A-246ENST00000637736 Q6ZSA8 131 aa12.49□□□□□ -0.41
CACNA1A-246ENST00000637736 EPG5Q9HCE0 2579 aa12.49□□□□□ -0.41
CACNA1A-246ENST00000637736 C15orf56Q8N910 161 aa12.49□□□□□ -0.41
CACNA1A-246ENST00000637736 Q8N377 158 aa12.47□□□□□ -0.41
CACNA1A-246ENST00000637736 TLX1NBP0CAT3 122 aa12.46□□□□□ -0.42
CACNA1A-246ENST00000637736 A0A087WTM6 91 aa12.45□□□□□ -0.42
CACNA1A-246ENST00000637736 IGLV7-43P04211 117 aa12.45□□□□□ -0.42
CACNA1A-246ENST00000637736 Q1T7F1 81 aa12.45□□□□□ -0.42
CACNA1A-246ENST00000637736 PRR34Q9NV39 138 aa12.45□□□□□ -0.42
CACNA1A-246ENST00000637736 K7EIL1 84 aa12.42□□□□□ -0.42
CACNA1A-246ENST00000637736 SPANXA2-OT1Q8N9U9 137 aa12.41□□□□□ -0.42
CACNA1A-246ENST00000637736 KRTAP10-11P60412 298 aa12.41□□□□□ -0.42
CACNA1A-246ENST00000637736 MGAM2Q2M2H8 2515 aa12.4□□□□□ -0.42
CACNA1A-246ENST00000637736 KLK9Q2XQG4 91 aa12.4□□□□□ -0.42
CACNA1A-246ENST00000637736 AKAP13Q12802 2813 aa12.39□□□□□ -0.43
CACNA1A-246ENST00000637736 DNAH12Q6ZR08 3092 aa12.39□□□□□ -0.43
CACNA1A-246ENST00000637736 PSORS1C2Q9UIG4 136 aa12.39□□□□□ -0.43
CACNA1A-246ENST00000637736 C9orf163Q8N9P6 203 aa12.37□□□□□ -0.43
CACNA1A-246ENST00000637736 HECTD1Q9ULT8 2610 aa12.35□□□□□ -0.43
CACNA1A-246ENST00000637736 C19orf73Q9NVV2 129 aa12.35□□□□□ -0.43
CACNA1A-246ENST00000637736 CFAP46Q8IYW2 2715 aa12.32□□□□□ -0.44
CACNA1A-246ENST00000637736 SPRR4Q96PI1 79 aa12.32□□□□□ -0.44
CACNA1A-246ENST00000637736 PRR26Q8N8Z3 221 aa12.31□□□□□ -0.44
CACNA1A-246ENST00000637736 WIPF1O43516 503 aa12.3□□□□□ -0.44
CACNA1A-246ENST00000637736 FLNAP21333 2647 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-246ENST00000637736 CNBPP62633 177 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-246ENST00000637736 H7BZZ5 65 aa12.29□□□□□ -0.44
CACNA1A-246ENST00000637736 HRES1P13985 223 aa12.29□□□□□ -0.44
CACNA1A-246ENST00000637736 A0A1B0GU33 70 aa12.28□□□□□ -0.44
CACNA1A-246ENST00000637736 IGLV7-46A0A075B6I9 117 aa12.26□□□□□ -0.45
CACNA1A-246ENST00000637736 MAST4O15021 2626 aa12.26□□□□□ -0.45
CACNA1A-246ENST00000637736 A0A0A0MQY5 61 aa12.25□□□□□ -0.45
CACNA1A-246ENST00000637736 ITPR3Q14573 2671 aa12.23□□□□□ -0.45
CACNA1A-246ENST00000637736 ATRQ13535 2644 aa12.21□□□□□ -0.46
CACNA1A-246ENST00000637736 CEP350Q5VT06 3117 aa12.2□□□□□ -0.46
CACNA1A-246ENST00000637736 S4R3F8 94 aa12.18□□□□□ -0.46
CACNA1A-246ENST00000637736 FLNBO75369 2602 aaKnown RBP12.18□□□□□ -0.46
CACNA1A-246ENST00000637736 LINC00612Q8N6U2 182 aa12.17□□□□□ -0.46
CACNA1A-246ENST00000637736 GIG44P09565 113 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-246ENST00000637736 EIF4EBP3O60516 100 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-246ENST00000637736 CSAG1Q6PB30 78 aa12.1□□□□□ -0.47
CACNA1A-246ENST00000637736 DMAC1Q96GE9 116 aa12.09□□□□□ -0.47
CACNA1A-246ENST00000637736 C5orf42Q9H799 3197 aa12.09□□□□□ -0.47
CACNA1A-246ENST00000637736 NBEAL1Q6ZS30 2694 aa12.09□□□□□ -0.47
CACNA1A-246ENST00000637736 HELZ2Q9BYK8 2649 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-246ENST00000637736 A0A1W2PNM2 257 aa12.07□□□□□ -0.48
CACNA1A-246ENST00000637736 CASC10Q5T4H9 136 aa12.06□□□□□ -0.48
CACNA1A-246ENST00000637736 SPINK7P58062 85 aa12.06□□□□□ -0.48
CACNA1A-246ENST00000637736 CENPEQ02224 2701 aa12.05□□□□□ -0.48
CACNA1A-246ENST00000637736 R4GN34 69 aa12.05□□□□□ -0.48
CACNA1A-246ENST00000637736 KRTAP10-3P60369 221 aa12.04□□□□□ -0.48
CACNA1A-246ENST00000637736 FAM229BQ4G0N7 80 aa11.99□□□□□ -0.49
CACNA1A-246ENST00000637736 STAB1Q9NY15 2570 aa11.98□□□□□ -0.49
CACNA1A-246ENST00000637736 A0A096LNT2 108 aa11.97□□□□□ -0.49
CACNA1A-246ENST00000637736 H3BS24 57 aa11.97□□□□□ -0.49
CACNA1A-246ENST00000637736 TNP2Q05952 138 aa11.97□□□□□ -0.49
CACNA1A-246ENST00000637736 OCR1Q9BZK8 76 aa11.96□□□□□ -0.5
CACNA1A-246ENST00000637736 H1FX-AS1Q4G0G2 97 aa11.96□□□□□ -0.5
CACNA1A-246ENST00000637736 CHD6Q8TD26 2715 aa11.96□□□□□ -0.5
CACNA1A-246ENST00000637736 Q75L30 129 aa11.94□□□□□ -0.5
CACNA1A-246ENST00000637736 TEX15Q9BXT5 2789 aa11.93□□□□□ -0.5
CACNA1A-246ENST00000637736 PLAC4Q8WY50 150 aa11.91□□□□□ -0.5
CACNA1A-246ENST00000637736 ZCCHC13Q8WW36 166 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-246ENST00000637736 UTRNP46939 3433 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms