RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 FAM19A3Q7Z5A8 133 aa6.87□□□□□ -1.31
SMARCA1-205ENST00000617310 FAM30AQ9NZY2 134 aa6.87□□□□□ -1.31
SMARCA1-205ENST00000617310 NDUFC2O95298 119 aa6.86□□□□□ -1.31
SMARCA1-205ENST00000617310 IGHV6-1A0A0B4J1U7 121 aa6.86□□□□□ -1.31
SMARCA1-205ENST00000617310 A0A087WVE0 104 aa6.84□□□□□ -1.31
SMARCA1-205ENST00000617310 PRYO14603 147 aa6.84□□□□□ -1.31
SMARCA1-205ENST00000617310 APCP25054 2843 aa6.84□□□□□ -1.31
SMARCA1-205ENST00000617310 LINC00575Q6W349 94 aa6.84□□□□□ -1.31
SMARCA1-205ENST00000617310 CR1P17927 2039 aa6.84□□□□□ -1.31
SMARCA1-205ENST00000617310 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
SMARCA1-205ENST00000617310 SPACA4Q8TDM5 124 aa6.83□□□□□ -1.32
SMARCA1-205ENST00000617310 MOBPQ13875 183 aa6.82□□□□□ -1.32
SMARCA1-205ENST00000617310 LINC01561Q8N1V8 128 aa6.82□□□□□ -1.32
SMARCA1-205ENST00000617310 FAM168BA1KXE4 195 aa6.82□□□□□ -1.32
SMARCA1-205ENST00000617310 NF1P21359 2839 aa6.82□□□□□ -1.32
SMARCA1-205ENST00000617310 Q6ZRP5 223 aa6.81□□□□□ -1.32
SMARCA1-205ENST00000617310 IGLV5-45A0A087WSX0 123 aa6.81□□□□□ -1.32
SMARCA1-205ENST00000617310 KIAA0087Q14695 138 aa6.81□□□□□ -1.32
SMARCA1-205ENST00000617310 TMEM258P61165 79 aa6.81□□□□□ -1.32
SMARCA1-205ENST00000617310 SMIM20Q8N5G0 67 aa6.81□□□□□ -1.32
SMARCA1-205ENST00000617310 SMR3BP02814 79 aaPredicted RBP6.8□□□□□ -1.32
SMARCA1-205ENST00000617310 LINC01547P58512 204 aaPredicted RBP6.8□□□□□ -1.32
SMARCA1-205ENST00000617310 Q8N9L7 120 aa6.8□□□□□ -1.32
SMARCA1-205ENST00000617310 F8WDY8 70 aa6.8□□□□□ -1.32
SMARCA1-205ENST00000617310 ATP5EP2Q5VTU8 51 aa6.8□□□□□ -1.32
SMARCA1-205ENST00000617310 TM2D3Q9BRN9 247 aa6.8□□□□□ -1.32
SMARCA1-205ENST00000617310 FLG2Q5D862 2391 aaPredicted RBP6.79□□□□□ -1.32
SMARCA1-205ENST00000617310 ST20-AS1Q8NBB2 130 aa6.78□□□□□ -1.32
SMARCA1-205ENST00000617310 FAM229AH3BQW9 127 aa6.78□□□□□ -1.32
SMARCA1-205ENST00000617310 CASC10Q5T4H9 136 aa6.78□□□□□ -1.32
SMARCA1-205ENST00000617310 LINC01546A6NGU7 62 aa6.77□□□□□ -1.33
SMARCA1-205ENST00000617310 FAM218AQ96MZ4 157 aa6.77□□□□□ -1.33
SMARCA1-205ENST00000617310 Q6JHZ5 121 aa6.77□□□□□ -1.33
SMARCA1-205ENST00000617310 EIF4EBP3O60516 100 aaPredicted RBP6.77□□□□□ -1.33
SMARCA1-205ENST00000617310 EPM2AB3EWF7 344 aa6.76□□□□□ -1.33
SMARCA1-205ENST00000617310 GVQW2A0A096LPI5 108 aaPredicted RBP6.76□□□□□ -1.33
SMARCA1-205ENST00000617310 LINC00208Q96KT6 92 aa6.76□□□□□ -1.33
SMARCA1-205ENST00000617310 LINC00846Q9NV44 126 aa6.76□□□□□ -1.33
SMARCA1-205ENST00000617310 SERTAD4-AS1Q5TG53 156 aa6.75□□□□□ -1.33
SMARCA1-205ENST00000617310 MPLKIPQ8TAP9 179 aa6.73□□□□□ -1.33
SMARCA1-205ENST00000617310 SEC61GP60059 68 aa6.73□□□□□ -1.33
SMARCA1-205ENST00000617310 Q6ZVQ6 151 aa6.73□□□□□ -1.33
SMARCA1-205ENST00000617310 PCOTHQ58A44 107 aa6.73□□□□□ -1.33
SMARCA1-205ENST00000617310 UQCRQO14949 82 aa6.72□□□□□ -1.33
SMARCA1-205ENST00000617310 CRYGAP11844 174 aa6.72□□□□□ -1.33
SMARCA1-205ENST00000617310 A0A087WTM6 91 aa6.71□□□□□ -1.33
SMARCA1-205ENST00000617310 VPREB1P12018 145 aa6.71□□□□□ -1.33
SMARCA1-205ENST00000617310 Q6ZRX8 168 aa6.71□□□□□ -1.33
SMARCA1-205ENST00000617310 C15orf56Q8N910 161 aa6.71□□□□□ -1.33
SMARCA1-205ENST00000617310 PRR34Q9NV39 138 aa6.71□□□□□ -1.33
SMARCA1-205ENST00000617310 FBN2P35556 2912 aa6.71□□□□□ -1.33
SMARCA1-205ENST00000617310 ZNF469Q96JG9 3925 aaPredicted RBP6.71□□□□□ -1.33
SMARCA1-205ENST00000617310 LINC00612Q8N6U2 182 aa6.71□□□□□ -1.34
SMARCA1-205ENST00000617310 SPINK1P00995 79 aa6.7□□□□□ -1.34
SMARCA1-205ENST00000617310 TYMSOSQ8TAI1 123 aa6.7□□□□□ -1.34
SMARCA1-205ENST00000617310 Q6Q795 121 aa6.7□□□□□ -1.34
SMARCA1-205ENST00000617310 SERP2Q8N6R1 65 aa6.7□□□□□ -1.34
SMARCA1-205ENST00000617310 APLNQ9ULZ1 77 aa6.69□□□□□ -1.34
SMARCA1-205ENST00000617310 PLA2G1BP04054 148 aaKnown RBP6.69□□□□□ -1.34
SMARCA1-205ENST00000617310 ELOF1P60002 83 aaKnown RBP6.69□□□□□ -1.34
SMARCA1-205ENST00000617310 LINC00476Q8WZB0 136 aa6.69□□□□□ -1.34
SMARCA1-205ENST00000617310 ANAPC11Q9NYG5 84 aa6.69□□□□□ -1.34
SMARCA1-205ENST00000617310 IGKV2D-30A0A075B6S6 120 aa6.68□□□□□ -1.34
SMARCA1-205ENST00000617310 IGKV2-30P06310 120 aa6.68□□□□□ -1.34
SMARCA1-205ENST00000617310 FAM236DA0A1B0GTK5 79 aa6.68□□□□□ -1.34
SMARCA1-205ENST00000617310 FAM236CP0DP71 79 aa6.68□□□□□ -1.34
SMARCA1-205ENST00000617310 LITAFQ99732 161 aa6.68□□□□□ -1.34
SMARCA1-205ENST00000617310 A0A0G2JQZ4 141 aa6.67□□□□□ -1.34
SMARCA1-205ENST00000617310 A0A1W2PNN7 141 aa6.67□□□□□ -1.34
SMARCA1-205ENST00000617310 HRNRQ86YZ3 2850 aaPredicted RBP6.67□□□□□ -1.34
SMARCA1-205ENST00000617310 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
SMARCA1-205ENST00000617310 HCG22E2RYF7 251 aa6.67□□□□□ -1.34
SMARCA1-205ENST00000617310 LIMD2Q9BT23 127 aa6.67□□□□□ -1.34
SMARCA1-205ENST00000617310 FAM240AA0A1B0GVK7 77 aa6.66□□□□□ -1.34
SMARCA1-205ENST00000617310 J3QL48 77 aa6.66□□□□□ -1.34
SMARCA1-205ENST00000617310 BCE1O60756 84 aa6.66□□□□□ -1.34
SMARCA1-205ENST00000617310 RPL37AP61513 92 aaKnown RBP6.66□□□□□ -1.34
SMARCA1-205ENST00000617310 CCDC179H3BU77 68 aa6.66□□□□□ -1.34
SMARCA1-205ENST00000617310 TENM3Q9P273 2699 aa6.66□□□□□ -1.34
SMARCA1-205ENST00000617310 SMCPP49901 116 aaPredicted RBP6.65□□□□□ -1.34
SMARCA1-205ENST00000617310 TNP2Q05952 138 aa6.65□□□□□ -1.34
SMARCA1-205ENST00000617310 C9orf163Q8N9P6 203 aa6.65□□□□□ -1.34
SMARCA1-205ENST00000617310 IMUPQ9GZP8 106 aa6.65□□□□□ -1.34
SMARCA1-205ENST00000617310 J3KT08 172 aa6.65□□□□□ -1.35
SMARCA1-205ENST00000617310 C9orf129Q5T035 196 aaKnown RBP6.64□□□□□ -1.35
SMARCA1-205ENST00000617310 SPTSSBQ8NFR3 76 aa6.63□□□□□ -1.35
SMARCA1-205ENST00000617310 COX7CP15954 63 aa6.62□□□□□ -1.35
SMARCA1-205ENST00000617310 Q8NBF4 154 aa6.62□□□□□ -1.35
SMARCA1-205ENST00000617310 PKD1L1Q8TDX9 2849 aa6.62□□□□□ -1.35
SMARCA1-205ENST00000617310 IGLV6-57P01721 117 aa6.61□□□□□ -1.35
SMARCA1-205ENST00000617310 IGLV1-50A0A075B6I6 118 aa6.61□□□□□ -1.35
SMARCA1-205ENST00000617310 ZNF575Q86XF7 245 aa6.61□□□□□ -1.35
SMARCA1-205ENST00000617310 H0Y9P7 68 aa6.61□□□□□ -1.35
SMARCA1-205ENST00000617310 TRBV7-6A0A0J9YX20 115 aa6.59□□□□□ -1.35
SMARCA1-205ENST00000617310 SMIM29Q86T20 159 aa6.59□□□□□ -1.35
SMARCA1-205ENST00000617310 BRK1Q8WUW1 75 aa6.59□□□□□ -1.35
SMARCA1-205ENST00000617310 TRAV7A0A075B6U4 112 aa6.59□□□□□ -1.35
SMARCA1-205ENST00000617310 PSORS1C2Q9UIG4 136 aa6.58□□□□□ -1.36
SMARCA1-205ENST00000617310 LINC00528Q8N1L1 170 aa6.57□□□□□ -1.36
SMARCA1-205ENST00000617310 KCNQ1DNQ9H478 68 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms