RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
CDCA3-211ENST00000603043 ACYP1P07311 99 aa9.88□□□□□ -0.83
CDCA3-211ENST00000603043 Q8N1X5 172 aa9.87□□□□□ -0.83
CDCA3-211ENST00000603043 EIF4EBP3O60516 100 aaPredicted RBP9.86□□□□□ -0.83
CDCA3-211ENST00000603043 COX6CP09669 75 aa9.86□□□□□ -0.83
CDCA3-211ENST00000603043 KRTAP17-1Q9BYP8 105 aa9.86□□□□□ -0.83
CDCA3-211ENST00000603043 MUSTN1Q8IVN3 82 aa9.86□□□□□ -0.83
CDCA3-211ENST00000603043 PLAC8Q9NZF1 115 aa9.86□□□□□ -0.83
CDCA3-211ENST00000603043 A0A1B0GX51 115 aa9.85□□□□□ -0.83
CDCA3-211ENST00000603043 C3orf22Q8N5N4 141 aa9.85□□□□□ -0.83
CDCA3-211ENST00000603043 H7C2G1 150 aa9.84□□□□□ -0.83
CDCA3-211ENST00000603043 UQCRQO14949 82 aa9.84□□□□□ -0.83
CDCA3-211ENST00000603043 TRIAP1O43715 76 aa9.84□□□□□ -0.83
CDCA3-211ENST00000603043 J3KT08 172 aa9.83□□□□□ -0.84
CDCA3-211ENST00000603043 C9orf153Q5TBE3 101 aa9.83□□□□□ -0.84
CDCA3-211ENST00000603043 LINC00528Q8N1L1 170 aa9.83□□□□□ -0.84
CDCA3-211ENST00000603043 ZNF625Q96I27 306 aaPredicted RBP9.83□□□□□ -0.84
CDCA3-211ENST00000603043 FAT1Q14517 4588 aa9.82□□□□□ -0.84
CDCA3-211ENST00000603043 Q5VSD8 79 aa9.82□□□□□ -0.84
CDCA3-211ENST00000603043 EPM2AB3EWF7 344 aa9.81□□□□□ -0.84
CDCA3-211ENST00000603043 FAM229AH3BQW9 127 aa9.81□□□□□ -0.84
CDCA3-211ENST00000603043 FAM236AA0A1B0GUQ0 79 aa9.81□□□□□ -0.84
CDCA3-211ENST00000603043 FAM236BA0A1B0GV22 79 aa9.81□□□□□ -0.84
CDCA3-211ENST00000603043 A0A1W2PNN7 141 aa9.81□□□□□ -0.84
CDCA3-211ENST00000603043 LST1O00453 97 aa9.8□□□□□ -0.84
CDCA3-211ENST00000603043 PFN2P35080 140 aa9.8□□□□□ -0.84
CDCA3-211ENST00000603043 RPS28P62857 69 aaKnown RBP9.8□□□□□ -0.84
CDCA3-211ENST00000603043 C9orf129Q5T035 196 aaKnown RBP9.8□□□□□ -0.84
CDCA3-211ENST00000603043 XAGE1AQ9HD64 81 aa9.8□□□□□ -0.84
CDCA3-211ENST00000603043 NDUFA12Q9UI09 145 aa9.8□□□□□ -0.84
CDCA3-211ENST00000603043 FAM168BA1KXE4 195 aa9.79□□□□□ -0.84
CDCA3-211ENST00000603043 COX17Q14061 63 aa9.79□□□□□ -0.84
CDCA3-211ENST00000603043 LINC00643Q86TS7 51 aa9.79□□□□□ -0.84
CDCA3-211ENST00000603043 A0A0J9YXY3 114 aa9.78□□□□□ -0.84
CDCA3-211ENST00000603043 KRTAP4-5Q9BYR2 181 aa9.78□□□□□ -0.84
CDCA3-211ENST00000603043 FAM19A5Q7Z5A7 132 aaPredicted RBP9.77□□□□□ -0.84
CDCA3-211ENST00000603043 OR13C6PQ8NH95 151 aa9.77□□□□□ -0.84
CDCA3-211ENST00000603043 C7orf33Q8WU49 177 aa9.77□□□□□ -0.85
CDCA3-211ENST00000603043 PLA2G1BP04054 148 aaKnown RBP9.76□□□□□ -0.85
CDCA3-211ENST00000603043 COX7CP15954 63 aa9.75□□□□□ -0.85
CDCA3-211ENST00000603043 LINC00158P58513 81 aa9.75□□□□□ -0.85
CDCA3-211ENST00000603043 KRTAP7-1Q8IUC3 87 aa9.74□□□□□ -0.85
CDCA3-211ENST00000603043 LITAFQ99732 161 aa9.74□□□□□ -0.85
CDCA3-211ENST00000603043 SRRM2Q9UQ35 2752 aaKnown RBP9.74□□□□□ -0.85
CDCA3-211ENST00000603043 A0A0U1RRA0 63 aa9.74□□□□□ -0.85
CDCA3-211ENST00000603043 CRYGAP11844 174 aa9.74□□□□□ -0.85
CDCA3-211ENST00000603043 RPL37AP61513 92 aaKnown RBP9.74□□□□□ -0.85
CDCA3-211ENST00000603043 SND1-IT1Q9HBX3 110 aa9.74□□□□□ -0.85
CDCA3-211ENST00000603043 SERTAD4-AS1Q5TG53 156 aa9.73□□□□□ -0.85
CDCA3-211ENST00000603043 PHF5AQ7RTV0 110 aaKnown RBP9.73□□□□□ -0.85
CDCA3-211ENST00000603043 TIMM17BO60830 172 aa9.72□□□□□ -0.85
CDCA3-211ENST00000603043 CLEC2BQ92478 149 aa9.72□□□□□ -0.85
CDCA3-211ENST00000603043 VPS13BQ7Z7G8 4022 aa9.71□□□□□ -0.86
CDCA3-211ENST00000603043 ATOX1O00244 68 aa9.71□□□□□ -0.86
CDCA3-211ENST00000603043 GAGE2AQ6NT46 116 aa9.71□□□□□ -0.86
CDCA3-211ENST00000603043 KRTAP10-4P60372 401 aaPredicted RBP9.7□□□□□ -0.86
CDCA3-211ENST00000603043 PLA2G2DQ9UNK4 145 aa9.7□□□□□ -0.86
CDCA3-211ENST00000603043 MIR7-3HGQ8N6C7 128 aa9.69□□□□□ -0.86
CDCA3-211ENST00000603043 C22orf24Q9Y442 160 aa9.69□□□□□ -0.86
CDCA3-211ENST00000603043 ABCA13Q86UQ4 5058 aa9.69□□□□□ -0.86
CDCA3-211ENST00000603043 DAND5Q8N907 189 aa9.68□□□□□ -0.86
CDCA3-211ENST00000603043 HIST1H4AP62805 103 aaKnown RBP9.68□□□□□ -0.86
CDCA3-211ENST00000603043 PCLOQ9Y6V0 5065 aa9.67□□□□□ -0.86
CDCA3-211ENST00000603043 TMEM258P61165 79 aa9.67□□□□□ -0.86
CDCA3-211ENST00000603043 PRR3P79522 188 aaKnown RBP9.67□□□□□ -0.86
CDCA3-211ENST00000603043 SMCR5Q8TEV8 140 aa9.67□□□□□ -0.86
CDCA3-211ENST00000603043 TRACP01848 142 aa9.66□□□□□ -0.86
CDCA3-211ENST00000603043 UBE2BP63146 152 aa9.66□□□□□ -0.86
CDCA3-211ENST00000603043 MRPL55Q7Z7F7 128 aaKnown RBP9.66□□□□□ -0.86
CDCA3-211ENST00000603043 IGLV5-37A0A075B6J1 123 aa9.66□□□□□ -0.86
CDCA3-211ENST00000603043 INAFM2P0DMQ5 153 aa9.66□□□□□ -0.86
CDCA3-211ENST00000603043 NKAPP1Q8N9T2 125 aa9.66□□□□□ -0.86
CDCA3-211ENST00000603043 VPREB1P12018 145 aa9.64□□□□□ -0.87
CDCA3-211ENST00000603043 ADAMTSL4-AS1Q5T5F5 129 aa9.64□□□□□ -0.87
CDCA3-211ENST00000603043 COPS9Q8WXC6 57 aa9.64□□□□□ -0.87
CDCA3-211ENST00000603043 PSORS1C2Q9UIG4 136 aa9.64□□□□□ -0.87
CDCA3-211ENST00000603043 KRTAP11-1Q8IUC1 163 aa9.64□□□□□ -0.87
CDCA3-211ENST00000603043 Q8NDZ9 215 aa9.63□□□□□ -0.87
CDCA3-211ENST00000603043 LINC00167Q96N53 147 aa9.62□□□□□ -0.87
CDCA3-211ENST00000603043 FLG2Q5D862 2391 aaPredicted RBP9.62□□□□□ -0.87
CDCA3-211ENST00000603043 C1orf137Q5JT78 98 aa9.61□□□□□ -0.87
CDCA3-211ENST00000603043 RPL37AP8A6NKH3 93 aa9.6□□□□□ -0.87
CDCA3-211ENST00000603043 hADV29S1A0JD25 119 aa9.59□□□□□ -0.87
CDCA3-211ENST00000603043 NPC2P61916 151 aa9.59□□□□□ -0.87
CDCA3-211ENST00000603043 BAALC-AS2P0C853 105 aa9.58□□□□□ -0.88
CDCA3-211ENST00000603043 SERP2Q8N6R1 65 aa9.58□□□□□ -0.88
CDCA3-211ENST00000603043 IGKV2-28A0A075B6P5 120 aa9.57□□□□□ -0.88
CDCA3-211ENST00000603043 IGKV2D-28P01615 120 aa9.57□□□□□ -0.88
CDCA3-211ENST00000603043 Q6JHZ5 121 aa9.57□□□□□ -0.88
CDCA3-211ENST00000603043 SOSTDC1Q6X4U4 206 aa9.57□□□□□ -0.88
CDCA3-211ENST00000603043 M0R378 163 aa9.56□□□□□ -0.88
CDCA3-211ENST00000603043 NCR3O14931 201 aa9.56□□□□□ -0.88
CDCA3-211ENST00000603043 IGLV1-50A0A075B6I6 118 aa9.55□□□□□ -0.88
CDCA3-211ENST00000603043 LINC00308Q8TCZ7 52 aa9.55□□□□□ -0.88
CDCA3-211ENST00000603043 IGLV7-43P04211 117 aa9.55□□□□□ -0.88
CDCA3-211ENST00000603043 NDUFC2O95298 119 aa9.54□□□□□ -0.88
CDCA3-211ENST00000603043 SPINK6Q6UWN8 80 aa9.54□□□□□ -0.88
CDCA3-211ENST00000603043 MYCBP2O75592 4640 aa9.52□□□□□ -0.89
CDCA3-211ENST00000603043 BCE1O60756 84 aa9.52□□□□□ -0.89
CDCA3-211ENST00000603043 DNAL4O96015 105 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms