RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 A8MTW9 85 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 H3BRN7 92 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 H3BUT2 72 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 DEFB1P60022 68 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 RBM3P98179 157 aaKnown RBP2.49□□□□□ -2.01
LRRC28-222ENST00000561431 FAM229BQ4G0N7 80 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 SPANXN5Q5MJ07 72 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 GDF5OSQ5U4N7 250 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 LYZL1Q6UWQ5 148 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 LINC00269Q8N2A0 174 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 Q8NAQ8 132 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 TMEM141Q96I45 108 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 SCRT1Q9BWW7 348 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 C14orf132Q9NPU4 83 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 PSENENQ9NZ42 101 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 NDUFA12Q9UI09 145 aa2.49□□□□□ -2.01
LRRC28-222ENST00000561431 IGKV2D-24A0A075B6R9 120 aa2.48□□□□□ -2.01
LRRC28-222ENST00000561431 A0A096LNJ9 63 aa2.48□□□□□ -2.01
LRRC28-222ENST00000561431 A0A0B4J2C4 111 aa2.48□□□□□ -2.01
LRRC28-222ENST00000561431 SNRPGP15A8MWD9 76 aa2.48□□□□□ -2.01
LRRC28-222ENST00000561431 H3BPC8 53 aa2.48□□□□□ -2.01
LRRC28-222ENST00000561431 H3BQ85 93 aa2.48□□□□□ -2.01
LRRC28-222ENST00000561431 DEFB4AO15263 64 aa2.48□□□□□ -2.01
LRRC28-222ENST00000561431 CFAP126Q5VTH2 177 aa2.48□□□□□ -2.01
LRRC28-222ENST00000561431 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.48□□□□□ -2.01
LRRC28-222ENST00000561431 Q6ZQT0 140 aa2.48□□□□□ -2.01
LRRC28-222ENST00000561431 CYP2G1PQ6ZSU1 146 aa2.48□□□□□ -2.01
LRRC28-222ENST00000561431 TIMM9Q9Y5J7 89 aa2.48□□□□□ -2.01
LRRC28-222ENST00000561431 A0A087WSZ3 146 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 A0A0J9YX75 114 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 NUPR2A6NF83 97 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 F2Z2F3 143 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 H7C2G1 150 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 BCE1O60756 84 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 CRPP02741 224 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 ZNF22P17026 224 aaPredicted RBP2.47□□□□□ -2.01
LRRC28-222ENST00000561431 ELOBQ15370 118 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 DEFB116Q30KQ4 102 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 ODF3Q96PU9 254 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 CYP4F30PQ9H0H9 118 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 CYSTM1Q9H1C7 97 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 NXT2Q9NPJ8 142 aaKnown RBP2.47□□□□□ -2.01
LRRC28-222ENST00000561431 LINC00474Q9P2X8 69 aa2.47□□□□□ -2.01
LRRC28-222ENST00000561431 DNAH1Q9P2D7 4330 aa2.46□□□□□ -2.01
LRRC28-222ENST00000561431 ALMS1Q8TCU4 4167 aa2.46□□□□□ -2.02
LRRC28-222ENST00000561431 TRAV13-2A0A0B4J235 113 aa2.46□□□□□ -2.02
LRRC28-222ENST00000561431 H7BZZ5 65 aa2.46□□□□□ -2.02
LRRC28-222ENST00000561431 ACYP1P07311 99 aa2.46□□□□□ -2.02
LRRC28-222ENST00000561431 SFTA3P0C7M3 94 aa2.46□□□□□ -2.02
LRRC28-222ENST00000561431 PRB4P10163 310 aaPredicted RBP2.46□□□□□ -2.02
LRRC28-222ENST00000561431 MIFP14174 115 aa2.46□□□□□ -2.02
LRRC28-222ENST00000561431 C1orf134Q5TEV5 83 aa2.46□□□□□ -2.02
LRRC28-222ENST00000561431 CASC2Q6XLA1 102 aa2.46□□□□□ -2.02
LRRC28-222ENST00000561431 CYB561D1Q8N8Q1 229 aa2.46□□□□□ -2.02
LRRC28-222ENST00000561431 SACSQ9NZJ4 4579 aa2.46□□□□□ -2.02
LRRC28-222ENST00000561431 EPPK1P58107 5090 aaKnown RBP2.45□□□□□ -2.02
LRRC28-222ENST00000561431 TRBV10-3A0A0K0K1G6 114 aa2.45□□□□□ -2.02
LRRC28-222ENST00000561431 UMAD1C9J7I0 102 aa2.45□□□□□ -2.02
LRRC28-222ENST00000561431 IGHV3-53P01767 116 aa2.45□□□□□ -2.02
LRRC28-222ENST00000561431 KLKP1Q107X0 134 aa2.45□□□□□ -2.02
LRRC28-222ENST00000561431 S100A7L2Q5SY68 101 aa2.45□□□□□ -2.02
LRRC28-222ENST00000561431 Q5W150 140 aa2.45□□□□□ -2.02
LRRC28-222ENST00000561431 NMES1Q9C002 83 aa2.45□□□□□ -2.02
LRRC28-222ENST00000561431 HIGD1BQ9P298 99 aa2.45□□□□□ -2.02
LRRC28-222ENST00000561431 PLECQ15149 4684 aaKnown RBP2.45□□□□□ -2.02
LRRC28-222ENST00000561431 IGLV10-54A0A075B6I4 117 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 TRAV10A0A0B4J240 114 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 LOC107984156A0A0G2JMH3 177 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 C16orf90A8MZG2 172 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 LY6G6CO95867 125 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 IGLV7-43P04211 117 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 KRTAP10-1P60331 282 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 UBE2G1P62253 170 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 SPINK13Q1W4C9 94 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 C9orf116Q5BN46 136 aaPredicted RBP2.44□□□□□ -2.02
LRRC28-222ENST00000561431 TMEM170BQ5T4T1 132 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 C10orf113Q5VZT2 155 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 LYPD5Q6UWN5 251 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 LINC00643Q86TS7 51 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 ARL17AQ8IVW1 177 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 PPP1R1CQ8WVI7 109 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 FAM167A-AS1Q96KT0 104 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 TMEM14CQ9P0S9 112 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 APLNQ9ULZ1 77 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 HYDINQ4G0P3 5121 aa2.44□□□□□ -2.02
LRRC28-222ENST00000561431 IGKV2-28A0A075B6P5 120 aa2.43□□□□□ -2.02
LRRC28-222ENST00000561431 M0R3E3 92 aa2.43□□□□□ -2.02
LRRC28-222ENST00000561431 IGKV2D-28P01615 120 aa2.43□□□□□ -2.02
LRRC28-222ENST00000561431 BAALC-AS2P0C853 105 aa2.43□□□□□ -2.02
LRRC28-222ENST00000561431 UBE2D3P61077 147 aa2.43□□□□□ -2.02
LRRC28-222ENST00000561431 UBE2D2P62837 147 aa2.43□□□□□ -2.02
LRRC28-222ENST00000561431 RPL7L1Q6DKI1 246 aaKnown RBP2.43□□□□□ -2.02
LRRC28-222ENST00000561431 CMTM2Q8TAZ6 248 aa2.43□□□□□ -2.02
LRRC28-222ENST00000561431 C20orf166-AS1Q96NR2 134 aa2.43□□□□□ -2.02
LRRC28-222ENST00000561431 TIMM21Q9BVV7 248 aa2.43□□□□□ -2.02
LRRC28-222ENST00000561431 CDC42SE1Q9NRR8 79 aa2.43□□□□□ -2.02
LRRC28-222ENST00000561431 IGLV4-60A0A075B6I1 120 aa2.42□□□□□ -2.02
LRRC28-222ENST00000561431 IGKV2-40A0A087WW87 121 aaPredicted RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms