RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 A0A096LNJ9 63 aa6.12□□□□□ -1.43
SYNE3-205ENST00000557275 C9orf129Q5T035 196 aaKnown RBP6.12□□□□□ -1.43
SYNE3-205ENST00000557275 COL4A3Q01955 1670 aa6.12□□□□□ -1.43
SYNE3-205ENST00000557275 TEP1Q99973 2627 aaKnown RBP6.12□□□□□ -1.43
SYNE3-205ENST00000557275 LINC00167Q96N53 147 aa6.12□□□□□ -1.43
SYNE3-205ENST00000557275 PRO0461Q9UI25 63 aa6.12□□□□□ -1.43
SYNE3-205ENST00000557275 A8MUN3 132 aa6.12□□□□□ -1.43
SYNE3-205ENST00000557275 AVPP01185 164 aa6.11□□□□□ -1.43
SYNE3-205ENST00000557275 Q96NJ1 140 aa6.1□□□□□ -1.43
SYNE3-205ENST00000557275 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
SYNE3-205ENST00000557275 FAM19A4Q96LR4 140 aa6.1□□□□□ -1.43
SYNE3-205ENST00000557275 IGLV6-57P01721 117 aa6.09□□□□□ -1.43
SYNE3-205ENST00000557275 RBM12B-AS1Q9P1G2 102 aa6.08□□□□□ -1.44
SYNE3-205ENST00000557275 CRIP3Q6Q6R5 217 aa6.08□□□□□ -1.44
SYNE3-205ENST00000557275 DMAC1Q96GE9 116 aa6.08□□□□□ -1.44
SYNE3-205ENST00000557275 COX6B2Q6YFQ2 88 aa6.08□□□□□ -1.44
SYNE3-205ENST00000557275 WIPF1O43516 503 aa6.07□□□□□ -1.44
SYNE3-205ENST00000557275 C10orf99Q6UWK7 81 aa6.07□□□□□ -1.44
SYNE3-205ENST00000557275 ST20-AS1Q8NBB2 130 aa6.07□□□□□ -1.44
SYNE3-205ENST00000557275 FHL3Q13643 280 aa6.07□□□□□ -1.44
SYNE3-205ENST00000557275 CAMK2N1Q7Z7J9 78 aa6.07□□□□□ -1.44
SYNE3-205ENST00000557275 MAP1AP78559 2803 aaPredicted RBP6.05□□□□□ -1.44
SYNE3-205ENST00000557275 SMCPP49901 116 aaPredicted RBP6.05□□□□□ -1.44
SYNE3-205ENST00000557275 A0A1B0GVX0 72 aa6.05□□□□□ -1.44
SYNE3-205ENST00000557275 K7EQZ3 153 aa6.04□□□□□ -1.44
SYNE3-205ENST00000557275 LINC00336Q6ZUF6 198 aa6.04□□□□□ -1.44
SYNE3-205ENST00000557275 H7BZZ5 65 aa6.03□□□□□ -1.44
SYNE3-205ENST00000557275 FAM218AQ96MZ4 157 aa6.03□□□□□ -1.44
SYNE3-205ENST00000557275 C18orf65Q6ZTR6 163 aa6.03□□□□□ -1.44
SYNE3-205ENST00000557275 FAM104AQ969W3 186 aa6.03□□□□□ -1.44
SYNE3-205ENST00000557275 UTRNP46939 3433 aa6.02□□□□□ -1.45
SYNE3-205ENST00000557275 CHTF8P0CG12 524 aa6.01□□□□□ -1.45
SYNE3-205ENST00000557275 PCNTO95613 3336 aa6.01□□□□□ -1.45
SYNE3-205ENST00000557275 ZNF292O60281 2723 aa6.01□□□□□ -1.45
SYNE3-205ENST00000557275 KCNQ1DNQ9H478 68 aa6.01□□□□□ -1.45
SYNE3-205ENST00000557275 ITPR2Q14571 2701 aa6.01□□□□□ -1.45
SYNE3-205ENST00000557275 Q6ZSN1 163 aa6□□□□□ -1.45
SYNE3-205ENST00000557275 A0A1W2PNU3 283 aaPredicted RBP5.99□□□□□ -1.45
SYNE3-205ENST00000557275 RTL8CO15255 209 aa5.99□□□□□ -1.45
SYNE3-205ENST00000557275 LINC00304Q8N9R0 145 aa5.99□□□□□ -1.45
SYNE3-205ENST00000557275 DNAH10OSP0CZ25 163 aa5.99□□□□□ -1.45
SYNE3-205ENST00000557275 J3QL48 77 aa5.98□□□□□ -1.45
SYNE3-205ENST00000557275 LAMA2P24043 3122 aaKnown RBP5.97□□□□□ -1.45
SYNE3-205ENST00000557275 NBDYA0A0U1RRE5 68 aa5.96□□□□□ -1.45
SYNE3-205ENST00000557275 Q75L30 129 aa5.96□□□□□ -1.46
SYNE3-205ENST00000557275 C15orf56Q8N910 161 aa5.95□□□□□ -1.46
SYNE3-205ENST00000557275 HRES1P13985 223 aa5.94□□□□□ -1.46
SYNE3-205ENST00000557275 LINC00528Q8N1L1 170 aa5.94□□□□□ -1.46
SYNE3-205ENST00000557275 IGLV5-37A0A075B6J1 123 aa5.93□□□□□ -1.46
SYNE3-205ENST00000557275 H3BS24 57 aa5.93□□□□□ -1.46
SYNE3-205ENST00000557275 TNP2Q05952 138 aa5.93□□□□□ -1.46
SYNE3-205ENST00000557275 WWC2-AS2Q96NR7 200 aa5.93□□□□□ -1.46
SYNE3-205ENST00000557275 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
SYNE3-205ENST00000557275 IGFL1Q6UW32 110 aa5.93□□□□□ -1.46
SYNE3-205ENST00000557275 PHF5AQ7RTV0 110 aaKnown RBP5.93□□□□□ -1.46
SYNE3-205ENST00000557275 OBSCN-AS1Q96MR7 158 aa5.92□□□□□ -1.46
SYNE3-205ENST00000557275 LINC00588Q9Y4M8 146 aa5.92□□□□□ -1.46
SYNE3-205ENST00000557275 ZNF861PO60384 105 aa5.92□□□□□ -1.46
SYNE3-205ENST00000557275 LINC00315P59091 139 aa5.91□□□□□ -1.46
SYNE3-205ENST00000557275 C5orf42Q9H799 3197 aa5.91□□□□□ -1.46
SYNE3-205ENST00000557275 IGLV1-50A0A075B6I6 118 aa5.91□□□□□ -1.46
SYNE3-205ENST00000557275 SMR3AQ99954 134 aa5.9□□□□□ -1.46
SYNE3-205ENST00000557275 ASB16-AS1Q495Z4 193 aa5.9□□□□□ -1.47
SYNE3-205ENST00000557275 IGLV5-48A0A075B6I7 105 aa5.89□□□□□ -1.47
SYNE3-205ENST00000557275 A0A1B0GU33 70 aa5.89□□□□□ -1.47
SYNE3-205ENST00000557275 CFAP54Q96N23 3096 aa5.89□□□□□ -1.47
SYNE3-205ENST00000557275 LITAFQ99732 161 aa5.89□□□□□ -1.47
SYNE3-205ENST00000557275 FLNCQ14315 2725 aa5.89□□□□□ -1.47
SYNE3-205ENST00000557275 TLX1NBP0CAT3 122 aa5.89□□□□□ -1.47
SYNE3-205ENST00000557275 NSD1Q96L73 2696 aaPredicted RBP5.88□□□□□ -1.47
SYNE3-205ENST00000557275 IGSF10Q6WRI0 2623 aa5.88□□□□□ -1.47
SYNE3-205ENST00000557275 A0A0D9SG42 100 aa5.87□□□□□ -1.47
SYNE3-205ENST00000557275 EIF4EBP3O60516 100 aaPredicted RBP5.87□□□□□ -1.47
SYNE3-205ENST00000557275 C9orf163Q8N9P6 203 aa5.86□□□□□ -1.47
SYNE3-205ENST00000557275 DSCR10P59022 87 aa5.86□□□□□ -1.47
SYNE3-205ENST00000557275 IGLV7-46A0A075B6I9 117 aa5.84□□□□□ -1.47
SYNE3-205ENST00000557275 Q8NAQ8 132 aa5.84□□□□□ -1.47
SYNE3-205ENST00000557275 CDSNQ15517 529 aa5.83□□□□□ -1.48
SYNE3-205ENST00000557275 A0A0C4DFX4 3053 aa5.82□□□□□ -1.48
SYNE3-205ENST00000557275 Q8N377 158 aa5.82□□□□□ -1.48
SYNE3-205ENST00000557275 PRR34Q9NV39 138 aa5.82□□□□□ -1.48
SYNE3-205ENST00000557275 IGLV7-43P04211 117 aa5.82□□□□□ -1.48
SYNE3-205ENST00000557275 WISP2O76076 250 aa5.81□□□□□ -1.48
SYNE3-205ENST00000557275 OCR1Q9BZK8 76 aa5.8□□□□□ -1.48
SYNE3-205ENST00000557275 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
SYNE3-205ENST00000557275 COL4A2P08572 1712 aa5.79□□□□□ -1.48
SYNE3-205ENST00000557275 TRANK1O15050 2925 aa5.78□□□□□ -1.48
SYNE3-205ENST00000557275 TRIOO75962 3097 aa5.78□□□□□ -1.48
SYNE3-205ENST00000557275 FAM168BA1KXE4 195 aa5.77□□□□□ -1.49
SYNE3-205ENST00000557275 SPINK7P58062 85 aa5.77□□□□□ -1.49
SYNE3-205ENST00000557275 APCP25054 2843 aa5.77□□□□□ -1.49
SYNE3-205ENST00000557275 KLK9Q2XQG4 91 aa5.77□□□□□ -1.49
SYNE3-205ENST00000557275 ZNF575Q86XF7 245 aa5.77□□□□□ -1.49
SYNE3-205ENST00000557275 SPRR4Q96PI1 79 aa5.77□□□□□ -1.49
SYNE3-205ENST00000557275 CNBPP62633 177 aaKnown RBP5.76□□□□□ -1.49
SYNE3-205ENST00000557275 Q6ZSA8 131 aa5.75□□□□□ -1.49
SYNE3-205ENST00000557275 C9orf92A6NGG3 77 aa5.75□□□□□ -1.49
SYNE3-205ENST00000557275 CSAG1Q6PB30 78 aa5.75□□□□□ -1.49
SYNE3-205ENST00000557275 KRTAP16-1A8MUX0 517 aa5.75□□□□□ -1.49
SYNE3-205ENST00000557275 Q8N1X5 172 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms