RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 KDM3BQ7LBC6 1761 aa0.36□□□□□ -2.35
SUPT16H-206ENST00000556309 PAPPA2Q9BXP8 1791 aa0.36□□□□□ -2.35
SUPT16H-206ENST00000556309 E9PCH4 1651 aa0.36□□□□□ -2.35
SUPT16H-206ENST00000556309 LMO7Q8WWI1 1683 aa0.36□□□□□ -2.35
SUPT16H-206ENST00000556309 MUC4Q99102 2169 aa0.36□□□□□ -2.35
SUPT16H-206ENST00000556309 MYO18AQ92614 2054 aaKnown RBP0.36□□□□□ -2.35
SUPT16H-206ENST00000556309 TANC2Q9HCD6 1990 aa0.36□□□□□ -2.35
SUPT16H-206ENST00000556309 CASP8AP2Q9UKL3 1982 aa0.36□□□□□ -2.35
SUPT16H-206ENST00000556309 TJP1Q07157 1748 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 QSER1Q2KHR3 1735 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 DDX60LQ5H9U9 1706 aaKnown RBP0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 TIAM2Q8IVF5 1701 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 PI4KAP42356 2102 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 TRPM7Q96QT4 1865 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 APCP25054 2843 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 BCORQ6W2J9 1755 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 ARFGEF2Q9Y6D5 1785 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 DOCK11Q5JSL3 2073 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 COL4A6Q14031 1691 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 LINC00158P58513 81 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 DEFB109BQ30KR1 87 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 SPINK9Q5DT21 86 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 DEFB123Q8N688 67 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 LINC00308Q8TCZ7 52 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 MRPL34Q9BQ48 92 aaKnown RBP0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 LINC00472Q9H8W2 130 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 NOP10Q9NPE3 64 aaKnown RBP0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 C6orf48Q9UBA6 75 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 ARFGEF1Q9Y6D6 1849 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 PARP4Q9UKK3 1724 aaKnown RBP0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 UBR3Q6ZT12 1888 aa0.35□□□□□ -2.35
SUPT16H-206ENST00000556309 MUC22E2RYF6 1773 aaPredicted RBP0.34□□□□□ -2.35
SUPT16H-206ENST00000556309 PTPRFP10586 1907 aa0.34□□□□□ -2.35
SUPT16H-206ENST00000556309 PTPRDP23468 1912 aa0.34□□□□□ -2.35
SUPT16H-206ENST00000556309 ZNF462Q96JM2 2506 aa0.34□□□□□ -2.35
SUPT16H-206ENST00000556309 SIP14410 1827 aa0.34□□□□□ -2.35
SUPT16H-206ENST00000556309 MYO7BQ6PIF6 2116 aa0.34□□□□□ -2.35
SUPT16H-206ENST00000556309 HEATR1Q9H583 2144 aaKnown RBP0.34□□□□□ -2.35
SUPT16H-206ENST00000556309 LINC00959A0A1B0GUT2 108 aa0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 G3V318 75 aa0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 C4AP0C0L4 1744 aa0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 C4BP0C0L5 1744 aa0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 IAPPP10997 89 aa0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 Q5VSD8 79 aa0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 DDX60Q8IY21 1712 aaKnown RBP0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 C10orf95Q9H7T3 257 aa0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 PRO0255Q9UI72 69 aa0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 MACF1Q9UPN3 7388 aaKnown RBP0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 KIAA0100Q14667 2235 aaKnown RBP0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 COL14A1Q05707 1796 aaKnown RBP0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 ZGRF1Q86YA3 2104 aa0.34□□□□□ -2.36
SUPT16H-206ENST00000556309 NRAPQ86VF7 1730 aa0.33□□□□□ -2.36
SUPT16H-206ENST00000556309 DOT1LQ8TEK3 1739 aa0.33□□□□□ -2.36
SUPT16H-206ENST00000556309 TOGARAM1Q9Y4F4 1720 aa0.33□□□□□ -2.36
SUPT16H-206ENST00000556309 IGLV5-48A0A075B6I7 105 aa0.33□□□□□ -2.36
SUPT16H-206ENST00000556309 C10orf142B7Z368 130 aa0.33□□□□□ -2.36
SUPT16H-206ENST00000556309 H0YGG7 62 aa0.33□□□□□ -2.36
SUPT16H-206ENST00000556309 K7EIL1 84 aa0.33□□□□□ -2.36
SUPT16H-206ENST00000556309 FRAS1Q86XX4 4008 aa0.33□□□□□ -2.36
SUPT16H-206ENST00000556309 KIAA1549Q9HCM3 1950 aa0.33□□□□□ -2.36
SUPT16H-206ENST00000556309 TSC2P49815 1807 aa0.33□□□□□ -2.36
SUPT16H-206ENST00000556309 ZNF831Q5JPB2 1677 aa0.33□□□□□ -2.36
SUPT16H-206ENST00000556309 TNRC6CQ9HCJ0 1690 aaKnown RBP0.33□□□□□ -2.36
SUPT16H-206ENST00000556309 ANKRD36A6QL64 1941 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 SSC5DA1L4H1 1573 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 MED12Q93074 2177 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 ZNF236Q9UL36 1845 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 A8MTW9 85 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 CRIP1P50238 77 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 PRCDQ00LT1 54 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 WT1-ASQ06250 92 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 TFF3Q07654 80 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 WFDC10BQ8IUB3 73 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 DEFB105AQ8NG35 78 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 ARHGAP5-AS1Q96IT6 56 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 NINQ8N4C6 2090 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 SPTBP11277 2137 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 MYO7AQ13402 2215 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 MED13LQ71F56 2210 aa0.32□□□□□ -2.36
SUPT16H-206ENST00000556309 ESPL1Q14674 2120 aa0.31□□□□□ -2.36
SUPT16H-206ENST00000556309 H3BUX3 64 aa0.31□□□□□ -2.36
SUPT16H-206ENST00000556309 I3L2K1 104 aa0.31□□□□□ -2.36
SUPT16H-206ENST00000556309 M0QY20 66 aa0.31□□□□□ -2.36
SUPT16H-206ENST00000556309 POLR2KP53803 58 aaKnown RBP0.31□□□□□ -2.36
SUPT16H-206ENST00000556309 H1FX-AS1Q4G0G2 97 aa0.31□□□□□ -2.36
SUPT16H-206ENST00000556309 LINC01590Q5TEZ4 76 aa0.31□□□□□ -2.36
SUPT16H-206ENST00000556309 WFDC13Q8IUB5 93 aa0.31□□□□□ -2.36
SUPT16H-206ENST00000556309 APLNQ9ULZ1 77 aa0.31□□□□□ -2.36
SUPT16H-206ENST00000556309 Q9Y3F1 56 aa0.31□□□□□ -2.36
SUPT16H-206ENST00000556309 TET1Q8NFU7 2136 aa0.31□□□□□ -2.36
SUPT16H-206ENST00000556309 TNCP24821 2201 aa0.3□□□□□ -2.36
SUPT16H-206ENST00000556309 PLXNB2O15031 1838 aa0.3□□□□□ -2.36
SUPT16H-206ENST00000556309 LOC730098B7Z3J9 87 aa0.3□□□□□ -2.36
SUPT16H-206ENST00000556309 M0QZ58 72 aa0.3□□□□□ -2.36
SUPT16H-206ENST00000556309 SPRR1AP35321 89 aa0.3□□□□□ -2.36
SUPT16H-206ENST00000556309 PRLHP81277 87 aa0.3□□□□□ -2.36
SUPT16H-206ENST00000556309 DEFB106AQ8N104 65 aa0.3□□□□□ -2.36
SUPT16H-206ENST00000556309 TMEM167AQ8TBQ9 72 aa0.3□□□□□ -2.36
SUPT16H-206ENST00000556309 TOMM7Q9P0U1 55 aa0.3□□□□□ -2.36
SUPT16H-206ENST00000556309 KAAG1Q9UBP8 84 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms