RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 PRR4Q16378 134 aa8.23□□□□□ -1.09
NR4A1-215ENST00000550557 LINC00208Q96KT6 92 aa8.23□□□□□ -1.09
NR4A1-215ENST00000550557 Q6ZVQ6 151 aa8.23□□□□□ -1.09
NR4A1-215ENST00000550557 GIG44P09565 113 aaPredicted RBP8.23□□□□□ -1.09
NR4A1-215ENST00000550557 SPACA4Q8TDM5 124 aa8.22□□□□□ -1.09
NR4A1-215ENST00000550557 BOD1L1Q8NFC6 3051 aa8.22□□□□□ -1.09
NR4A1-215ENST00000550557 GVQW2A0A096LPI5 108 aaPredicted RBP8.22□□□□□ -1.09
NR4A1-215ENST00000550557 NBEAL1Q6ZS30 2694 aa8.22□□□□□ -1.09
NR4A1-215ENST00000550557 A0A087WSZ3 146 aa8.22□□□□□ -1.09
NR4A1-215ENST00000550557 IGHV6-1A0A0B4J1U7 121 aa8.22□□□□□ -1.09
NR4A1-215ENST00000550557 TYMSOSQ8TAI1 123 aa8.21□□□□□ -1.09
NR4A1-215ENST00000550557 TMEM254Q8TBM7 123 aa8.21□□□□□ -1.1
NR4A1-215ENST00000550557 NOTCH1P46531 2555 aa8.21□□□□□ -1.1
NR4A1-215ENST00000550557 A0A1B0GW54 56 aa8.2□□□□□ -1.1
NR4A1-215ENST00000550557 APLNQ9ULZ1 77 aa8.2□□□□□ -1.1
NR4A1-215ENST00000550557 A0A087WTM6 91 aa8.2□□□□□ -1.1
NR4A1-215ENST00000550557 MOBPQ13875 183 aa8.2□□□□□ -1.1
NR4A1-215ENST00000550557 FREM2Q5SZK8 3169 aa8.19□□□□□ -1.1
NR4A1-215ENST00000550557 LINC01547P58512 204 aaPredicted RBP8.19□□□□□ -1.1
NR4A1-215ENST00000550557 SMR3BP02814 79 aaPredicted RBP8.18□□□□□ -1.1
NR4A1-215ENST00000550557 hDV103S1A0JD37 113 aa8.18□□□□□ -1.1
NR4A1-215ENST00000550557 EIF4EBP3O60516 100 aaPredicted RBP8.18□□□□□ -1.1
NR4A1-215ENST00000550557 LINC00476Q8WZB0 136 aa8.17□□□□□ -1.1
NR4A1-215ENST00000550557 USP34Q70CQ2 3546 aa8.17□□□□□ -1.1
NR4A1-215ENST00000550557 ADGRG4Q8IZF6 3080 aa8.16□□□□□ -1.1
NR4A1-215ENST00000550557 MYO15AQ9UKN7 3530 aa8.16□□□□□ -1.1
NR4A1-215ENST00000550557 CASC10Q5T4H9 136 aa8.15□□□□□ -1.1
NR4A1-215ENST00000550557 MAP1AP78559 2803 aaPredicted RBP8.15□□□□□ -1.11
NR4A1-215ENST00000550557 TRBV7-6A0A0J9YX20 115 aa8.15□□□□□ -1.11
NR4A1-215ENST00000550557 HCG22E2RYF7 251 aa8.14□□□□□ -1.11
NR4A1-215ENST00000550557 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
NR4A1-215ENST00000550557 PMAIP1Q13794 54 aa8.14□□□□□ -1.11
NR4A1-215ENST00000550557 LINC00612Q8N6U2 182 aa8.14□□□□□ -1.11
NR4A1-215ENST00000550557 DMXL2Q8TDJ6 3036 aa8.13□□□□□ -1.11
NR4A1-215ENST00000550557 EPM2AB3EWF7 344 aa8.13□□□□□ -1.11
NR4A1-215ENST00000550557 H0Y9P7 68 aa8.13□□□□□ -1.11
NR4A1-215ENST00000550557 RETNLBQ9BQ08 111 aa8.12□□□□□ -1.11
NR4A1-215ENST00000550557 CR1P17927 2039 aa8.1□□□□□ -1.11
NR4A1-215ENST00000550557 WIPF1O43516 503 aa8.1□□□□□ -1.11
NR4A1-215ENST00000550557 DEFB116Q30KQ4 102 aa8.1□□□□□ -1.11
NR4A1-215ENST00000550557 UBR5O95071 2799 aaPredicted RBP8.1□□□□□ -1.11
NR4A1-215ENST00000550557 KIAA0087Q14695 138 aa8.09□□□□□ -1.11
NR4A1-215ENST00000550557 C9orf163Q8N9P6 203 aa8.09□□□□□ -1.11
NR4A1-215ENST00000550557 DMXL1Q9Y485 3027 aa8.09□□□□□ -1.11
NR4A1-215ENST00000550557 PRR34Q9NV39 138 aa8.09□□□□□ -1.12
NR4A1-215ENST00000550557 Q8NBF4 154 aa8.08□□□□□ -1.12
NR4A1-215ENST00000550557 Q6ZRX8 168 aa8.07□□□□□ -1.12
NR4A1-215ENST00000550557 PRO0628Q9UI54 55 aa8.07□□□□□ -1.12
NR4A1-215ENST00000550557 LOC110117498A0A087WWA1 95 aa8.07□□□□□ -1.12
NR4A1-215ENST00000550557 LINC01600Q96MT4 127 aa8.06□□□□□ -1.12
NR4A1-215ENST00000550557 ATMQ13315 3056 aa8.06□□□□□ -1.12
NR4A1-215ENST00000550557 H3BPC8 53 aa8.06□□□□□ -1.12
NR4A1-215ENST00000550557 TP53AIP1Q9HCN2 124 aa8.06□□□□□ -1.12
NR4A1-215ENST00000550557 LOC400499M0QZD8 3231 aa8.06□□□□□ -1.12
NR4A1-215ENST00000550557 FAM168BA1KXE4 195 aa8.05□□□□□ -1.12
NR4A1-215ENST00000550557 FLNCQ14315 2725 aa8.05□□□□□ -1.12
NR4A1-215ENST00000550557 TNP2Q05952 138 aa8.04□□□□□ -1.12
NR4A1-215ENST00000550557 ELOF1P60002 83 aaKnown RBP8.04□□□□□ -1.12
NR4A1-215ENST00000550557 PCOTHQ58A44 107 aa8.04□□□□□ -1.12
NR4A1-215ENST00000550557 Q6ZQT0 140 aa8.04□□□□□ -1.12
NR4A1-215ENST00000550557 PSPHP1O15172 72 aa8.03□□□□□ -1.12
NR4A1-215ENST00000550557 C1orf64Q8NEQ6 169 aa8.03□□□□□ -1.12
NR4A1-215ENST00000550557 C15orf56Q8N910 161 aa8.03□□□□□ -1.12
NR4A1-215ENST00000550557 FAM104AQ969W3 186 aa8.03□□□□□ -1.12
NR4A1-215ENST00000550557 LRBAP50851 2863 aa8.02□□□□□ -1.13
NR4A1-215ENST00000550557 LINC00528Q8N1L1 170 aa8.02□□□□□ -1.13
NR4A1-215ENST00000550557 VPREB1P12018 145 aa8.01□□□□□ -1.13
NR4A1-215ENST00000550557 SERTAD4-AS1Q5TG53 156 aa8□□□□□ -1.13
NR4A1-215ENST00000550557 SMIM29Q86T20 159 aa8□□□□□ -1.13
NR4A1-215ENST00000550557 ZNF861PO60384 105 aa8□□□□□ -1.13
NR4A1-215ENST00000550557 ST20-AS1Q8NBB2 130 aa7.99□□□□□ -1.13
NR4A1-215ENST00000550557 KALRNO60229 2985 aa7.99□□□□□ -1.13
NR4A1-215ENST00000550557 IGKV2D-30A0A075B6S6 120 aa7.98□□□□□ -1.13
NR4A1-215ENST00000550557 IGKV2-30P06310 120 aa7.98□□□□□ -1.13
NR4A1-215ENST00000550557 LINC00304Q8N9R0 145 aa7.98□□□□□ -1.13
NR4A1-215ENST00000550557 NSD1Q96L73 2696 aaPredicted RBP7.97□□□□□ -1.13
NR4A1-215ENST00000550557 ATP11AUNQ6ZP68 121 aa7.96□□□□□ -1.13
NR4A1-215ENST00000550557 C4orf26Q17RF5 130 aa7.96□□□□□ -1.13
NR4A1-215ENST00000550557 SPAG11AQ6PDA7 123 aa7.96□□□□□ -1.13
NR4A1-215ENST00000550557 IGLV1-50A0A075B6I6 118 aa7.96□□□□□ -1.14
NR4A1-215ENST00000550557 ERC2-IT1O76042 136 aa7.95□□□□□ -1.14
NR4A1-215ENST00000550557 IGLV6-57P01721 117 aa7.95□□□□□ -1.14
NR4A1-215ENST00000550557 CNBPP62633 177 aaKnown RBP7.95□□□□□ -1.14
NR4A1-215ENST00000550557 COX6B2Q6YFQ2 88 aa7.95□□□□□ -1.14
NR4A1-215ENST00000550557 C9orf129Q5T035 196 aaKnown RBP7.95□□□□□ -1.14
NR4A1-215ENST00000550557 ITPR2Q14571 2701 aa7.94□□□□□ -1.14
NR4A1-215ENST00000550557 COL12A1Q99715 3063 aa7.94□□□□□ -1.14
NR4A1-215ENST00000550557 TACC2O95359 2948 aa7.93□□□□□ -1.14
NR4A1-215ENST00000550557 IGLV7-43P04211 117 aa7.93□□□□□ -1.14
NR4A1-215ENST00000550557 ACYP2P14621 99 aa7.93□□□□□ -1.14
NR4A1-215ENST00000550557 SPINK1P00995 79 aa7.92□□□□□ -1.14
NR4A1-215ENST00000550557 PSORS1C2Q9UIG4 136 aa7.92□□□□□ -1.14
NR4A1-215ENST00000550557 LINC00313P59037 77 aa7.92□□□□□ -1.14
NR4A1-215ENST00000550557 SSBP3-AS1Q7Z2R9 100 aa7.92□□□□□ -1.14
NR4A1-215ENST00000550557 LCE6AA0A183 80 aa7.92□□□□□ -1.14
NR4A1-215ENST00000550557 TLX1NBP0CAT3 122 aa7.91□□□□□ -1.14
NR4A1-215ENST00000550557 ITPR1Q14643 2758 aa7.91□□□□□ -1.14
NR4A1-215ENST00000550557 KCNQ1DNQ9H478 68 aa7.91□□□□□ -1.14
NR4A1-215ENST00000550557 TRBV7-4A0A0J9YYF1 115 aa7.91□□□□□ -1.14
NR4A1-215ENST00000550557 Q96NJ1 140 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 228.4 ms