RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 SRP19P09132 144 aaKnown RBP1.48□□□□□ -2.17
CHD4-209ENST00000542717 ADCYAP1P18509 176 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 BLOC1S1P78537 153 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 S100A12P80511 92 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 ADIRFQ15847 76 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 Q1RN00 199 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 KRTAP5-3Q6L8H2 238 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 ATP5L2Q7Z4Y8 100 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 ZNF625Q96I27 306 aaPredicted RBP1.48□□□□□ -2.17
CHD4-209ENST00000542717 Q96NJ1 140 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 SCGB3A1Q96QR1 104 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 Q9BRP9 147 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 CST9LQ9H4G1 147 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 NXT2Q9NPJ8 142 aaKnown RBP1.48□□□□□ -2.17
CHD4-209ENST00000542717 BATF3Q9NR55 127 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 TRBV10-3A0A0K0K1G6 114 aa1.47□□□□□ -2.17
CHD4-209ENST00000542717 LINC01549A6NIU2 74 aa1.47□□□□□ -2.17
CHD4-209ENST00000542717 LINC00158P58513 81 aa1.47□□□□□ -2.17
CHD4-209ENST00000542717 PMVKQ15126 192 aa1.47□□□□□ -2.17
CHD4-209ENST00000542717 RGS21Q2M5E4 152 aa1.47□□□□□ -2.17
CHD4-209ENST00000542717 ALKAL2Q6UX46 152 aa1.47□□□□□ -2.17
CHD4-209ENST00000542717 Q6ZRX8 168 aa1.47□□□□□ -2.17
CHD4-209ENST00000542717 BOD1L2Q8IYS8 172 aa1.47□□□□□ -2.17
CHD4-209ENST00000542717 NAT8Q9UHE5 227 aa1.47□□□□□ -2.17
CHD4-209ENST00000542717 C5orf52A6NGY3 159 aa1.46□□□□□ -2.18
CHD4-209ENST00000542717 IGLC3P0DOY3 106 aa1.46□□□□□ -2.18
CHD4-209ENST00000542717 HRES1P13985 223 aa1.46□□□□□ -2.18
CHD4-209ENST00000542717 ZNF22P17026 224 aaPredicted RBP1.46□□□□□ -2.18
CHD4-209ENST00000542717 CD164Q04900 197 aa1.46□□□□□ -2.18
CHD4-209ENST00000542717 JOSD1Q15040 202 aaPredicted RBP1.46□□□□□ -2.18
CHD4-209ENST00000542717 Q5XG85 94 aa1.46□□□□□ -2.18
CHD4-209ENST00000542717 SLC25A34Q6PIV7 304 aa1.46□□□□□ -2.18
CHD4-209ENST00000542717 MIR7-3HGQ8N6C7 128 aa1.46□□□□□ -2.18
CHD4-209ENST00000542717 ST20-AS1Q8NBB2 130 aa1.46□□□□□ -2.18
CHD4-209ENST00000542717 A0A0U1RRA0 63 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 FAM236AA0A1B0GUQ0 79 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 FAM236BA0A1B0GV22 79 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 LINC01546A6NGU7 62 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 LINC00587B1AMM8 73 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 C9JQL5 133 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 ATP6V1G1O75348 118 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 TCL1BO95988 128 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 SMIM13P0DJ93 91 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 SPRR1BP22528 89 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 DDTP30046 118 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 IGFL1Q6UW32 110 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 FA2HQ7L5A8 372 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 TCTE3Q8IZS6 198 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 MPLKIPQ8TAP9 179 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 PRO1933Q9H354 126 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 LAMTOR3Q9UHA4 124 aa1.45□□□□□ -2.18
CHD4-209ENST00000542717 TRAV23DV6A0A075B6W5 121 aa1.44□□□□□ -2.18
CHD4-209ENST00000542717 TRBV10-2A0A0K0K1G8 114 aa1.44□□□□□ -2.18
CHD4-209ENST00000542717 NDUFA6P56556 154 aa1.44□□□□□ -2.18
CHD4-209ENST00000542717 RBM3P98179 157 aaKnown RBP1.44□□□□□ -2.18
CHD4-209ENST00000542717 MEIG1Q5JSS6 88 aa1.44□□□□□ -2.18
CHD4-209ENST00000542717 TMEM170BQ5T4T1 132 aa1.44□□□□□ -2.18
CHD4-209ENST00000542717 C11orf86A6NJI1 115 aa1.43□□□□□ -2.18
CHD4-209ENST00000542717 ZNF73O43830 326 aaPredicted RBP1.43□□□□□ -2.18
CHD4-209ENST00000542717 HINT1P49773 126 aaPredicted RBP1.43□□□□□ -2.18
CHD4-209ENST00000542717 AKR1D1P51857 326 aa1.43□□□□□ -2.18
CHD4-209ENST00000542717 HERV-K104P63124 156 aa1.43□□□□□ -2.18
CHD4-209ENST00000542717 PEA15Q15121 130 aa1.43□□□□□ -2.18
CHD4-209ENST00000542717 KRTAP19-8Q3LI54 63 aa1.43□□□□□ -2.18
CHD4-209ENST00000542717 S100A7L2Q5SY68 101 aa1.43□□□□□ -2.18
CHD4-209ENST00000542717 LCE4AQ5TA78 99 aa1.43□□□□□ -2.18
CHD4-209ENST00000542717 ANAPC16Q96DE5 110 aa1.43□□□□□ -2.18
CHD4-209ENST00000542717 MAP1LC3CQ9BXW4 147 aa1.43□□□□□ -2.18
CHD4-209ENST00000542717 SMCO4Q9NRQ5 59 aa1.43□□□□□ -2.18
CHD4-209ENST00000542717 SPANXB1Q9NS25 103 aaPredicted RBP1.43□□□□□ -2.18
CHD4-209ENST00000542717 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
CHD4-209ENST00000542717 A0A1W2PNM2 257 aa1.42□□□□□ -2.18
CHD4-209ENST00000542717 TMEM223A0PJW6 202 aa1.42□□□□□ -2.18
CHD4-209ENST00000542717 A8MUU9 505 aa1.42□□□□□ -2.18
CHD4-209ENST00000542717 NDUFC2O95298 119 aa1.42□□□□□ -2.18
CHD4-209ENST00000542717 HBDP02042 147 aa1.42□□□□□ -2.18
CHD4-209ENST00000542717 NOTCH2NLQ7Z3S9 236 aa1.42□□□□□ -2.18
CHD4-209ENST00000542717 BAGE3Q86Y29 109 aa1.42□□□□□ -2.18
CHD4-209ENST00000542717 MIEN1Q9BRT3 115 aa1.42□□□□□ -2.18
CHD4-209ENST00000542717 DHRS4-AS1Q9P1J3 65 aa1.42□□□□□ -2.18
CHD4-209ENST00000542717 CBY1Q9Y3M2 126 aa1.42□□□□□ -2.18
CHD4-209ENST00000542717 A0A096LNJ9 63 aa1.41□□□□□ -2.18
CHD4-209ENST00000542717 TEX49A0A1B0GTD5 131 aa1.41□□□□□ -2.18
CHD4-209ENST00000542717 MYMXA0A1B0GTQ4 84 aa1.41□□□□□ -2.18
CHD4-209ENST00000542717 KRTAP16-1A8MUX0 517 aa1.41□□□□□ -2.18
CHD4-209ENST00000542717 MT-ND4LP03901 98 aa1.41□□□□□ -2.18
CHD4-209ENST00000542717 TAL2Q16559 108 aa1.41□□□□□ -2.18
CHD4-209ENST00000542717 COMMD7Q86VX2 200 aa1.41□□□□□ -2.18
CHD4-209ENST00000542717 DEFB105AQ8NG35 78 aa1.41□□□□□ -2.18
CHD4-209ENST00000542717 FAM218AQ96MZ4 157 aa1.41□□□□□ -2.18
CHD4-209ENST00000542717 KRTAP4-8A0A0G2JLE6 195 aa1.4□□□□□ -2.19
CHD4-209ENST00000542717 IFITM2Q01629 132 aa1.4□□□□□ -2.19
CHD4-209ENST00000542717 KRTAP4-8Q9BYQ9 185 aa1.4□□□□□ -2.19
CHD4-209ENST00000542717 PRO2289Q9P1D8 64 aa1.4□□□□□ -2.19
CHD4-209ENST00000542717 IGLV5-48A0A075B6I7 105 aa1.39□□□□□ -2.19
CHD4-209ENST00000542717 TRAV12-1A0A0B4J245 112 aa1.39□□□□□ -2.19
CHD4-209ENST00000542717 LINC00614P0C842 121 aa1.39□□□□□ -2.19
CHD4-209ENST00000542717 COX7BP24311 80 aa1.39□□□□□ -2.19
CHD4-209ENST00000542717 TSPEAR-AS2P59090 65 aa1.39□□□□□ -2.19
CHD4-209ENST00000542717 ELOF1P60002 83 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms