RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 MUC2Q02817 5179 aa4.11□□□□□ -1.75
ITGB1-218ENST00000528877 J3QQQ9 107 aa4.11□□□□□ -1.75
ITGB1-218ENST00000528877 HERVK_113P61574 105 aa4.11□□□□□ -1.75
ITGB1-218ENST00000528877 MEIG1Q5JSS6 88 aa4.11□□□□□ -1.75
ITGB1-218ENST00000528877 BOD1L2Q8IYS8 172 aa4.11□□□□□ -1.75
ITGB1-218ENST00000528877 SLC7A5P1Q8MH63 180 aa4.11□□□□□ -1.75
ITGB1-218ENST00000528877 TRBV10-2A0A0K0K1G8 114 aa4.1□□□□□ -1.75
ITGB1-218ENST00000528877 H0Y8G0 127 aa4.1□□□□□ -1.75
ITGB1-218ENST00000528877 IGKCP01834 107 aa4.1□□□□□ -1.75
ITGB1-218ENST00000528877 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
ITGB1-218ENST00000528877 SPRR4Q96PI1 79 aa4.1□□□□□ -1.75
ITGB1-218ENST00000528877 ANAPC11Q9NYG5 84 aa4.1□□□□□ -1.75
ITGB1-218ENST00000528877 ZNF706Q9Y5V0 76 aaPredicted RBP4.1□□□□□ -1.75
ITGB1-218ENST00000528877 A0A0U1RRA0 63 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 NCR3O14931 201 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 HIST1H2BKO60814 126 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 ATP6V1G1O75348 118 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 NDUFC2O95298 119 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 HIST1H2BJP06899 126 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 HIST1H2BOP23527 126 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 HIST1H2BBP33778 126 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 HIST1H2BDP58876 126 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 HIST1H2BCP62807 126 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 HIST2H2BEQ16778 126 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.09□□□□□ -1.75
ITGB1-218ENST00000528877 LINC00304Q8N9R0 145 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 HIST1H2BHQ93079 126 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 HIST1H2BNQ99877 126 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 HIST1H2BMQ99879 126 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 HIGD2AQ9BW72 106 aa4.09□□□□□ -1.75
ITGB1-218ENST00000528877 SPANXB1Q9NS25 103 aaPredicted RBP4.09□□□□□ -1.75
ITGB1-218ENST00000528877 TRBV10-3A0A0K0K1G6 114 aa4.08□□□□□ -1.76
ITGB1-218ENST00000528877 E9PLD3 99 aa4.08□□□□□ -1.76
ITGB1-218ENST00000528877 FABP4P15090 132 aa4.08□□□□□ -1.76
ITGB1-218ENST00000528877 LGALS3P17931 250 aaKnown RBP4.08□□□□□ -1.76
ITGB1-218ENST00000528877 PRR4Q16378 134 aa4.08□□□□□ -1.76
ITGB1-218ENST00000528877 LINC00483Q53H64 154 aa4.08□□□□□ -1.76
ITGB1-218ENST00000528877 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
ITGB1-218ENST00000528877 ETDCA0A1B0GVM5 59 aa4.07□□□□□ -1.76
ITGB1-218ENST00000528877 SYS1-DBNDD2H3BUS1 97 aa4.07□□□□□ -1.76
ITGB1-218ENST00000528877 TSPAN13O95857 204 aa4.07□□□□□ -1.76
ITGB1-218ENST00000528877 IGLV6-57P01721 117 aa4.07□□□□□ -1.76
ITGB1-218ENST00000528877 S100A12P80511 92 aa4.07□□□□□ -1.76
ITGB1-218ENST00000528877 COA6Q5JTJ3 125 aaKnown RBP4.07□□□□□ -1.76
ITGB1-218ENST00000528877 LINC01545Q5VT33 79 aa4.07□□□□□ -1.76
ITGB1-218ENST00000528877 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
ITGB1-218ENST00000528877 DAND5Q8N907 189 aa4.07□□□□□ -1.76
ITGB1-218ENST00000528877 SMCR5Q8TEV8 140 aa4.07□□□□□ -1.76
ITGB1-218ENST00000528877 PMCHL2Q9BQD1 86 aa4.07□□□□□ -1.76
ITGB1-218ENST00000528877 A0A0J9YXY3 114 aa4.06□□□□□ -1.76
ITGB1-218ENST00000528877 DDTP30046 118 aa4.06□□□□□ -1.76
ITGB1-218ENST00000528877 TPRXLQ17RH7 258 aa4.06□□□□□ -1.76
ITGB1-218ENST00000528877 SPAG11AQ6PDA7 123 aa4.06□□□□□ -1.76
ITGB1-218ENST00000528877 Q6ZRX8 168 aa4.06□□□□□ -1.76
ITGB1-218ENST00000528877 LITAFQ99732 161 aa4.06□□□□□ -1.76
ITGB1-218ENST00000528877 MIEN1Q9BRT3 115 aa4.06□□□□□ -1.76
ITGB1-218ENST00000528877 TIMM17BO60830 172 aa4.05□□□□□ -1.76
ITGB1-218ENST00000528877 PET117Q6UWS5 81 aa4.05□□□□□ -1.76
ITGB1-218ENST00000528877 SOSTDC1Q6X4U4 206 aa4.05□□□□□ -1.76
ITGB1-218ENST00000528877 C3orf22Q8N5N4 141 aa4.05□□□□□ -1.76
ITGB1-218ENST00000528877 MUC17Q685J3 4493 aa4.05□□□□□ -1.76
ITGB1-218ENST00000528877 TRAV23DV6A0A075B6W5 121 aa4.04□□□□□ -1.76
ITGB1-218ENST00000528877 RPS29P62273 56 aaKnown RBP4.04□□□□□ -1.76
ITGB1-218ENST00000528877 ADAMTSL4-AS1Q5T5F5 129 aa4.04□□□□□ -1.76
ITGB1-218ENST00000528877 FP248Q71RG6 208 aaPredicted RBP4.04□□□□□ -1.76
ITGB1-218ENST00000528877 Q9BRP9 147 aa4.04□□□□□ -1.76
ITGB1-218ENST00000528877 CBY1Q9Y3M2 126 aa4.04□□□□□ -1.76
ITGB1-218ENST00000528877 C5orf52A6NGY3 159 aa4.03□□□□□ -1.76
ITGB1-218ENST00000528877 PPDPFQ9H3Y8 114 aa4.03□□□□□ -1.76
ITGB1-218ENST00000528877 SPANXCQ9NY87 97 aa4.03□□□□□ -1.76
ITGB1-218ENST00000528877 ZNF73O43830 326 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-218ENST00000528877 ERC2-IT1O76042 136 aa4.02□□□□□ -1.77
ITGB1-218ENST00000528877 SPINK1P00995 79 aa4.02□□□□□ -1.77
ITGB1-218ENST00000528877 C3orf79P0CE67 100 aa4.02□□□□□ -1.77
ITGB1-218ENST00000528877 JOSD1Q15040 202 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-218ENST00000528877 S100A7L2Q5SY68 101 aa4.02□□□□□ -1.77
ITGB1-218ENST00000528877 LINC00308Q8TCZ7 52 aa4.02□□□□□ -1.77
ITGB1-218ENST00000528877 RETNLBQ9BQ08 111 aa4.02□□□□□ -1.77
ITGB1-218ENST00000528877 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
ITGB1-218ENST00000528877 AKR1D1P51857 326 aa4.01□□□□□ -1.77
ITGB1-218ENST00000528877 Q8NBF4 154 aa4.01□□□□□ -1.77
ITGB1-218ENST00000528877 SPANXDQ9BXN6 97 aa4.01□□□□□ -1.77
ITGB1-218ENST00000528877 PAM16Q9Y3D7 125 aa4.01□□□□□ -1.77
ITGB1-218ENST00000528877 IGLV7-46A0A075B6I9 117 aa4□□□□□ -1.77
ITGB1-218ENST00000528877 C20orf202A1L168 122 aa4□□□□□ -1.77
ITGB1-218ENST00000528877 ZNF815PA8K554 130 aa4□□□□□ -1.77
ITGB1-218ENST00000528877 SSBP3-AS1Q7Z2R9 100 aa4□□□□□ -1.77
ITGB1-218ENST00000528877 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
ITGB1-218ENST00000528877 A0A0U1RQV1 116 aa3.99□□□□□ -1.77
ITGB1-218ENST00000528877 SPRR1BP22528 89 aa3.99□□□□□ -1.77
ITGB1-218ENST00000528877 NPC2P61916 151 aa3.99□□□□□ -1.77
ITGB1-218ENST00000528877 MOBPQ13875 183 aa3.99□□□□□ -1.77
ITGB1-218ENST00000528877 GAGE2AQ6NT46 116 aa3.99□□□□□ -1.77
ITGB1-218ENST00000528877 DHRS4-AS1Q9P1J3 65 aa3.99□□□□□ -1.77
ITGB1-218ENST00000528877 TRBV7-6A0A0J9YX20 115 aa3.98□□□□□ -1.77
ITGB1-218ENST00000528877 ELOF1P60002 83 aaKnown RBP3.98□□□□□ -1.77
ITGB1-218ENST00000528877 KRTDAPP60985 99 aa3.98□□□□□ -1.77
ITGB1-218ENST00000528877 KRTAP13-3Q3SY46 172 aa3.98□□□□□ -1.77
ITGB1-218ENST00000528877 Q6ZVH6 145 aa3.98□□□□□ -1.77
ITGB1-218ENST00000528877 LINC00518Q8N0U6 118 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms