RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 MRPL35Q9NZE8 188 aaKnown RBP3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 TP73-AS1Q9UF72 201 aa3.12□□□□□ -1.91
CTNNA1-239ENST00000523685 H0Y8G0 127 aa3.11□□□□□ -1.91
CTNNA1-239ENST00000523685 H3BUT2 72 aa3.11□□□□□ -1.91
CTNNA1-239ENST00000523685 RPL13AP40429 203 aaKnown RBP3.11□□□□□ -1.91
CTNNA1-239ENST00000523685 RPL39P62891 51 aaKnown RBP3.11□□□□□ -1.91
CTNNA1-239ENST00000523685 HIGD1BQ9P298 99 aa3.11□□□□□ -1.91
CTNNA1-239ENST00000523685 C6orf48Q9UBA6 75 aa3.11□□□□□ -1.91
CTNNA1-239ENST00000523685 A0A1B0GW15 77 aa3.1□□□□□ -1.91
CTNNA1-239ENST00000523685 F8W1H4 67 aa3.1□□□□□ -1.91
CTNNA1-239ENST00000523685 PPP1R17O96001 155 aa3.1□□□□□ -1.91
CTNNA1-239ENST00000523685 C2orf82Q6UX34 121 aa3.1□□□□□ -1.91
CTNNA1-239ENST00000523685 GEMIN7Q9H840 131 aaKnown RBP3.1□□□□□ -1.91
CTNNA1-239ENST00000523685 ERG28Q9UKR5 140 aa3.1□□□□□ -1.91
CTNNA1-239ENST00000523685 CSDC2Q9Y534 153 aaKnown RBP3.1□□□□□ -1.91
CTNNA1-239ENST00000523685 IGHV3OR16-9A0A0B4J2B5 98 aa3.09□□□□□ -1.91
CTNNA1-239ENST00000523685 E9PLD3 99 aa3.09□□□□□ -1.91
CTNNA1-239ENST00000523685 F8WDY8 70 aa3.09□□□□□ -1.91
CTNNA1-239ENST00000523685 TLX1NBP0CAT3 122 aa3.09□□□□□ -1.91
CTNNA1-239ENST00000523685 CKS2P33552 79 aa3.09□□□□□ -1.91
CTNNA1-239ENST00000523685 MRPL51Q4U2R6 128 aaKnown RBP3.09□□□□□ -1.91
CTNNA1-239ENST00000523685 C9orf129Q5T035 196 aaKnown RBP3.09□□□□□ -1.91
CTNNA1-239ENST00000523685 C2orf66Q6UXQ4 117 aa3.09□□□□□ -1.91
CTNNA1-239ENST00000523685 LINC00173Q6ZV60 143 aa3.09□□□□□ -1.91
CTNNA1-239ENST00000523685 TIMM21Q9BVV7 248 aa3.09□□□□□ -1.91
CTNNA1-239ENST00000523685 VCX2Q9H322 139 aa3.09□□□□□ -1.91
CTNNA1-239ENST00000523685 PRO0461Q9UI25 63 aa3.09□□□□□ -1.91
CTNNA1-239ENST00000523685 ZNF861PO60384 105 aa3.08□□□□□ -1.92
CTNNA1-239ENST00000523685 SMIM13P0DJ93 91 aa3.08□□□□□ -1.92
CTNNA1-239ENST00000523685 CXCL6P80162 114 aa3.08□□□□□ -1.92
CTNNA1-239ENST00000523685 TAL2Q16559 108 aa3.08□□□□□ -1.92
CTNNA1-239ENST00000523685 FAM104BQ5XKR9 115 aa3.08□□□□□ -1.92
CTNNA1-239ENST00000523685 FAM104AQ969W3 186 aa3.08□□□□□ -1.92
CTNNA1-239ENST00000523685 RETNLBQ9BQ08 111 aa3.08□□□□□ -1.92
CTNNA1-239ENST00000523685 SPANXA1Q9NS26 97 aa3.08□□□□□ -1.92
CTNNA1-239ENST00000523685 TOMM7Q9P0U1 55 aa3.08□□□□□ -1.92
CTNNA1-239ENST00000523685 CYSLTR1Q9Y271 337 aa3.08□□□□□ -1.92
CTNNA1-239ENST00000523685 FAT4Q6V0I7 4981 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 A0A096LNJ9 63 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 TRBV30A0A0K0K1B3 111 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 A0A1B0GWB2 263 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 LINC01546A6NGU7 62 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 D6R8Y8 96 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 NDUFC2-KCTD14E9PQ53 114 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 H3BMG7 143 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 MRPS36P82909 103 aaKnown RBP3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 KIAA0087Q14695 138 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 C20orf78Q9BR46 151 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 SMIM2Q9BVW6 85 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 XAGE1AQ9HD64 81 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 ANAPC11Q9NYG5 84 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 C22orf24Q9Y442 160 aa3.07□□□□□ -1.92
CTNNA1-239ENST00000523685 NPYP01303 97 aa3.06□□□□□ -1.92
CTNNA1-239ENST00000523685 CRYGAP11844 174 aa3.06□□□□□ -1.92
CTNNA1-239ENST00000523685 IFI27P40305 119 aaPredicted RBP3.06□□□□□ -1.92
CTNNA1-239ENST00000523685 RPL28P46779 137 aaKnown RBP3.06□□□□□ -1.92
CTNNA1-239ENST00000523685 FXYD2P54710 66 aa3.06□□□□□ -1.92
CTNNA1-239ENST00000523685 KRTAP10-5P60370 271 aa3.06□□□□□ -1.92
CTNNA1-239ENST00000523685 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
CTNNA1-239ENST00000523685 LOC389332A0A1B0GUA5 103 aa3.05□□□□□ -1.92
CTNNA1-239ENST00000523685 HBDP02042 147 aa3.05□□□□□ -1.92
CTNNA1-239ENST00000523685 RPL32P62910 135 aaKnown RBP3.05□□□□□ -1.92
CTNNA1-239ENST00000523685 C6orf226Q5I0X4 101 aa3.05□□□□□ -1.92
CTNNA1-239ENST00000523685 LYRM7Q5U5X0 104 aa3.05□□□□□ -1.92
CTNNA1-239ENST00000523685 CEND1Q8N111 149 aa3.05□□□□□ -1.92
CTNNA1-239ENST00000523685 RAB37Q96AX2 223 aa3.05□□□□□ -1.92
CTNNA1-239ENST00000523685 TMEM141Q96I45 108 aa3.05□□□□□ -1.92
CTNNA1-239ENST00000523685 NAA38Q9BRA0 125 aaKnown RBP3.05□□□□□ -1.92
CTNNA1-239ENST00000523685 K7ERJ3 54 aa3.04□□□□□ -1.92
CTNNA1-239ENST00000523685 BCE1O60756 84 aa3.04□□□□□ -1.92
CTNNA1-239ENST00000523685 SPINK8P0C7L1 97 aa3.04□□□□□ -1.92
CTNNA1-239ENST00000523685 UBE2AP49459 152 aa3.04□□□□□ -1.92
CTNNA1-239ENST00000523685 ETDBQ3ZM63 59 aa3.04□□□□□ -1.92
CTNNA1-239ENST00000523685 Q6Q795 121 aa3.04□□□□□ -1.92
CTNNA1-239ENST00000523685 MRPL55Q7Z7F7 128 aaKnown RBP3.04□□□□□ -1.92
CTNNA1-239ENST00000523685 PCP2Q8IVA1 136 aa3.04□□□□□ -1.92
CTNNA1-239ENST00000523685 PPDPFLQ8WWR9 84 aa3.04□□□□□ -1.92
CTNNA1-239ENST00000523685 IFI27L1Q96BM0 104 aa3.04□□□□□ -1.92
CTNNA1-239ENST00000523685 PRELID3AQ96N28 172 aa3.04□□□□□ -1.92
CTNNA1-239ENST00000523685 SS18L2Q9UHA2 77 aa3.04□□□□□ -1.92
CTNNA1-239ENST00000523685 MT-ATP8P03928 68 aa3.03□□□□□ -1.92
CTNNA1-239ENST00000523685 NMUP48645 174 aa3.03□□□□□ -1.92
CTNNA1-239ENST00000523685 KRTAP13-2Q52LG2 175 aa3.03□□□□□ -1.92
CTNNA1-239ENST00000523685 TEN1Q86WV5 123 aa3.03□□□□□ -1.92
CTNNA1-239ENST00000523685 ORMDL3Q8N138 153 aa3.03□□□□□ -1.92
CTNNA1-239ENST00000523685 LINC00304Q8N9R0 145 aa3.03□□□□□ -1.92
CTNNA1-239ENST00000523685 LINC00167Q96N53 147 aa3.03□□□□□ -1.92
CTNNA1-239ENST00000523685 ANAPC13Q9BS18 74 aa3.03□□□□□ -1.92
CTNNA1-239ENST00000523685 NHP2Q9NX24 153 aaKnown RBP3.03□□□□□ -1.92
CTNNA1-239ENST00000523685 MUC17Q685J3 4493 aa3.03□□□□□ -1.93
CTNNA1-239ENST00000523685 IGLV8-61A0A075B6I0 122 aa3.02□□□□□ -1.93
CTNNA1-239ENST00000523685 IGKV2D-26A0A0A0MRZ7 120 aa3.02□□□□□ -1.93
CTNNA1-239ENST00000523685 ATP5LO75964 103 aa3.02□□□□□ -1.93
CTNNA1-239ENST00000523685 IGKCP01834 107 aa3.02□□□□□ -1.93
CTNNA1-239ENST00000523685 Q8IZM0 81 aa3.02□□□□□ -1.93
CTNNA1-239ENST00000523685 LINC01561Q8N1V8 128 aa3.02□□□□□ -1.93
CTNNA1-239ENST00000523685 MAP1LC3AQ9H492 121 aa3.02□□□□□ -1.93
CTNNA1-239ENST00000523685 IGKV2-28A0A075B6P5 120 aa3.01□□□□□ -1.93
CTNNA1-239ENST00000523685 F8VRH5 84 aa3.01□□□□□ -1.93
CTNNA1-239ENST00000523685 DPM2O94777 84 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms