RNA–Protein interactions for RNA: ENST00000523557.1

LINC01608-201, Transcript of long intergenic non-protein coding RNA 1608, humanhuman

TSL 4 BASIC

Gene LINC01608, Length 544 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01608-201ENST00000523557 CELSR2Q9HCU4 2923 aa0.55□□□□□ -2.32
LINC01608-201ENST00000523557 LMTK2Q8IWU2 1503 aa0.55□□□□□ -2.32
LINC01608-201ENST00000523557 PIEZO2Q9H5I5 2752 aa0.55□□□□□ -2.32
LINC01608-201ENST00000523557 CDC42BPGQ6DT37 1551 aa0.55□□□□□ -2.32
LINC01608-201ENST00000523557 INO80Q9ULG1 1556 aaPredicted RBP0.55□□□□□ -2.32
LINC01608-201ENST00000523557 CCL22O00626 93 aa0.55□□□□□ -2.32
LINC01608-201ENST00000523557 C3orf79P0CE67 100 aa0.55□□□□□ -2.32
LINC01608-201ENST00000523557 SPRR1BP22528 89 aa0.55□□□□□ -2.32
LINC01608-201ENST00000523557 BIVM-ERCC5R4GMW8 1640 aa0.55□□□□□ -2.32
LINC01608-201ENST00000523557 BDP1A6H8Y1 2624 aa0.55□□□□□ -2.32
LINC01608-201ENST00000523557 PLCH1Q4KWH8 1693 aa0.55□□□□□ -2.32
LINC01608-201ENST00000523557 APCP25054 2843 aa0.54□□□□□ -2.32
LINC01608-201ENST00000523557 ABCA9Q8IUA7 1624 aa0.54□□□□□ -2.32
LINC01608-201ENST00000523557 ENHOQ6UWT2 76 aa0.54□□□□□ -2.32
LINC01608-201ENST00000523557 APLNQ9ULZ1 77 aa0.54□□□□□ -2.32
LINC01608-201ENST00000523557 ABCA12Q86UK0 2595 aa0.54□□□□□ -2.32
LINC01608-201ENST00000523557 KIAA1109Q2LD37 5005 aa0.54□□□□□ -2.32
LINC01608-201ENST00000523557 CHD9Q3L8U1 2897 aa0.54□□□□□ -2.32
LINC01608-201ENST00000523557 PARP4Q9UKK3 1724 aaKnown RBP0.53□□□□□ -2.32
LINC01608-201ENST00000523557 IGF2RP11717 2491 aa0.53□□□□□ -2.32
LINC01608-201ENST00000523557 PIEZO1Q92508 2521 aa0.53□□□□□ -2.32
LINC01608-201ENST00000523557 SPINK6Q6UWN8 80 aa0.53□□□□□ -2.32
LINC01608-201ENST00000523557 COX6B2Q6YFQ2 88 aa0.53□□□□□ -2.32
LINC01608-201ENST00000523557 DEFB105AQ8NG35 78 aa0.53□□□□□ -2.32
LINC01608-201ENST00000523557 SETD2Q9BYW2 2564 aaPredicted RBP0.53□□□□□ -2.32
LINC01608-201ENST00000523557 NWD1Q149M9 1564 aa0.53□□□□□ -2.33
LINC01608-201ENST00000523557 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.33
LINC01608-201ENST00000523557 GVINP1Q7Z2Y8 2422 aa0.53□□□□□ -2.33
LINC01608-201ENST00000523557 WIZO95785 1651 aa0.53□□□□□ -2.33
LINC01608-201ENST00000523557 NHSQ6T4R5 1651 aa0.53□□□□□ -2.33
LINC01608-201ENST00000523557 RICTORQ6R327 1708 aa0.52□□□□□ -2.33
LINC01608-201ENST00000523557 NSD1Q96L73 2696 aaPredicted RBP0.52□□□□□ -2.33
LINC01608-201ENST00000523557 PKDREJQ9NTG1 2253 aa0.52□□□□□ -2.33
LINC01608-201ENST00000523557 LINC01549A6NIU2 74 aa0.52□□□□□ -2.33
LINC01608-201ENST00000523557 SPINK4O60575 86 aa0.52□□□□□ -2.33
LINC01608-201ENST00000523557 UBL5Q9BZL1 73 aa0.52□□□□□ -2.33
LINC01608-201ENST00000523557 CDKN2A-AS1Q9UH64 79 aa0.52□□□□□ -2.33
LINC01608-201ENST00000523557 VWFP04275 2813 aa0.52□□□□□ -2.33
LINC01608-201ENST00000523557 RALGAPBQ86X10 1494 aa0.52□□□□□ -2.33
LINC01608-201ENST00000523557 CICQ96RK0 1608 aaPredicted RBP0.52□□□□□ -2.33
LINC01608-201ENST00000523557 NDUFA3O95167 84 aa0.51□□□□□ -2.33
LINC01608-201ENST00000523557 SFTA3P0C7M3 94 aa0.51□□□□□ -2.33
LINC01608-201ENST00000523557 SMIM5Q71RC9 77 aa0.51□□□□□ -2.33
LINC01608-201ENST00000523557 PREX1Q8TCU6 1659 aa0.51□□□□□ -2.33
LINC01608-201ENST00000523557 FXYD6Q9H0Q3 95 aa0.51□□□□□ -2.33
LINC01608-201ENST00000523557 EIF2AK4Q9P2K8 1649 aaKnown RBP0.51□□□□□ -2.33
LINC01608-201ENST00000523557 SPTBN4Q9H254 2564 aa0.51□□□□□ -2.33
LINC01608-201ENST00000523557 NCOR2Q9Y618 2525 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 TPRP12270 2363 aaKnown RBP0.5□□□□□ -2.33
LINC01608-201ENST00000523557 ANK2Q01484 3957 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 CCDC180Q9P1Z9 1646 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 MUC5ACP98088 5654 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 COL6A5A8TX70 2615 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 DEFB131BA0A096LNP1 70 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 MRPL33O75394 65 aaKnown RBP0.5□□□□□ -2.33
LINC01608-201ENST00000523557 H1FX-AS1Q4G0G2 97 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 KCNQ1DNQ9H478 68 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 NAV2Q8IVL1 2488 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 SPTA1P02549 2419 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 BPTFQ12830 3046 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 DDX60LQ5H9U9 1706 aaKnown RBP0.5□□□□□ -2.33
LINC01608-201ENST00000523557 NRAPQ86VF7 1730 aa0.5□□□□□ -2.33
LINC01608-201ENST00000523557 NESP48681 1621 aa0.49□□□□□ -2.33
LINC01608-201ENST00000523557 KLK9Q2XQG4 91 aa0.49□□□□□ -2.33
LINC01608-201ENST00000523557 DEFB109BQ30KR1 87 aa0.49□□□□□ -2.33
LINC01608-201ENST00000523557 LELP1Q5T871 98 aa0.49□□□□□ -2.33
LINC01608-201ENST00000523557 TJP1Q07157 1748 aa0.49□□□□□ -2.33
LINC01608-201ENST00000523557 TNRC6CQ9HCJ0 1690 aaKnown RBP0.49□□□□□ -2.33
LINC01608-201ENST00000523557 AKAP6Q13023 2319 aa0.48□□□□□ -2.33
LINC01608-201ENST00000523557 ETDCA0A1B0GVM5 59 aa0.48□□□□□ -2.33
LINC01608-201ENST00000523557 SPINK1P00995 79 aa0.48□□□□□ -2.33
LINC01608-201ENST00000523557 PRO3102Q9H379 93 aa0.48□□□□□ -2.33
LINC01608-201ENST00000523557 KMT2DO14686 5537 aa0.47□□□□□ -2.33
LINC01608-201ENST00000523557 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.47□□□□□ -2.33
LINC01608-201ENST00000523557 PRH1P02810 166 aa0.47□□□□□ -2.33
LINC01608-201ENST00000523557 KRTAP2-3P0C7H8 128 aa0.47□□□□□ -2.33
LINC01608-201ENST00000523557 CRIP1P50238 77 aa0.47□□□□□ -2.33
LINC01608-201ENST00000523557 DEFB114Q30KQ6 69 aa0.47□□□□□ -2.33
LINC01608-201ENST00000523557 WFDC13Q8IUB5 93 aa0.47□□□□□ -2.33
LINC01608-201ENST00000523557 SMR3AQ99954 134 aa0.47□□□□□ -2.33
LINC01608-201ENST00000523557 KRTAP2-4Q9BYR9 128 aa0.47□□□□□ -2.33
LINC01608-201ENST00000523557 KRTAP2-1Q9BYU5 128 aa0.47□□□□□ -2.33
LINC01608-201ENST00000523557 CSPG4Q6UVK1 2322 aa0.47□□□□□ -2.33
LINC01608-201ENST00000523557 ABCA6Q8N139 1617 aa0.46□□□□□ -2.34
LINC01608-201ENST00000523557 SONP18583 2426 aaKnown RBP0.46□□□□□ -2.34
LINC01608-201ENST00000523557 TIAM1Q13009 1591 aa0.46□□□□□ -2.34
LINC01608-201ENST00000523557 LINC00158P58513 81 aa0.46□□□□□ -2.34
LINC01608-201ENST00000523557 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
LINC01608-201ENST00000523557 TRANK1O15050 2925 aa0.45□□□□□ -2.34
LINC01608-201ENST00000523557 FCER1GP30273 86 aa0.45□□□□□ -2.34
LINC01608-201ENST00000523557 CSMD3Q7Z407 3707 aa0.45□□□□□ -2.34
LINC01608-201ENST00000523557 CCDC168Q8NDH2 2452 aa0.45□□□□□ -2.34
LINC01608-201ENST00000523557 CREBBPQ92793 2442 aa0.45□□□□□ -2.34
LINC01608-201ENST00000523557 C4AP0C0L4 1744 aa0.44□□□□□ -2.34
LINC01608-201ENST00000523557 C4BP0C0L5 1744 aa0.44□□□□□ -2.34
LINC01608-201ENST00000523557 RYR2Q92736 4967 aa0.44□□□□□ -2.34
LINC01608-201ENST00000523557 K7EMI3 77 aa0.44□□□□□ -2.34
LINC01608-201ENST00000523557 KRTAP20-1Q3LI63 56 aa0.44□□□□□ -2.34
LINC01608-201ENST00000523557 NMES1Q9C002 83 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms