RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 FAM19A5Q7Z5A7 132 aaPredicted RBP11.63□□□□□ -0.55
IKBKB-228ENST00000523517 DEFB105AQ8NG35 78 aa11.61□□□□□ -0.55
IKBKB-228ENST00000523517 PLA2G2DQ9UNK4 145 aa11.61□□□□□ -0.55
IKBKB-228ENST00000523517 Q8N377 158 aa11.61□□□□□ -0.55
IKBKB-228ENST00000523517 MRAPQ8TCY5 172 aa11.59□□□□□ -0.55
IKBKB-228ENST00000523517 LINC00588Q9Y4M8 146 aa11.59□□□□□ -0.55
IKBKB-228ENST00000523517 PKD1L1Q8TDX9 2849 aa11.59□□□□□ -0.55
IKBKB-228ENST00000523517 CASC10Q5T4H9 136 aa11.58□□□□□ -0.56
IKBKB-228ENST00000523517 RPL37AP8A6NKH3 93 aa11.57□□□□□ -0.56
IKBKB-228ENST00000523517 OXTP01178 125 aa11.57□□□□□ -0.56
IKBKB-228ENST00000523517 DHRS4-AS1Q9P1J3 65 aa11.57□□□□□ -0.56
IKBKB-228ENST00000523517 ANK2Q01484 3957 aa11.57□□□□□ -0.56
IKBKB-228ENST00000523517 IGLV5-37A0A075B6J1 123 aa11.57□□□□□ -0.56
IKBKB-228ENST00000523517 FAM168BA1KXE4 195 aa11.57□□□□□ -0.56
IKBKB-228ENST00000523517 NREPQ16612 68 aa11.57□□□□□ -0.56
IKBKB-228ENST00000523517 KLKP1Q107X0 134 aa11.56□□□□□ -0.56
IKBKB-228ENST00000523517 Q6ZRX8 168 aa11.56□□□□□ -0.56
IKBKB-228ENST00000523517 TENM3Q9P273 2699 aa11.56□□□□□ -0.56
IKBKB-228ENST00000523517 IGLV5-48A0A075B6I7 105 aa11.56□□□□□ -0.56
IKBKB-228ENST00000523517 IGLV1-50A0A075B6I6 118 aa11.55□□□□□ -0.56
IKBKB-228ENST00000523517 KRTAP4-16G5E9R7 235 aaPredicted RBP11.55□□□□□ -0.56
IKBKB-228ENST00000523517 H7BZZ5 65 aa11.55□□□□□ -0.56
IKBKB-228ENST00000523517 PRYO14603 147 aa11.55□□□□□ -0.56
IKBKB-228ENST00000523517 TM2D3Q9BRN9 247 aa11.54□□□□□ -0.56
IKBKB-228ENST00000523517 Q9BRP9 147 aa11.54□□□□□ -0.56
IKBKB-228ENST00000523517 C3orf84H3BNL1 204 aa11.54□□□□□ -0.56
IKBKB-228ENST00000523517 SPRR1AP35321 89 aa11.54□□□□□ -0.56
IKBKB-228ENST00000523517 Q8N9L7 120 aa11.54□□□□□ -0.56
IKBKB-228ENST00000523517 FAM236DA0A1B0GTK5 79 aa11.53□□□□□ -0.56
IKBKB-228ENST00000523517 FAM236CP0DP71 79 aa11.53□□□□□ -0.56
IKBKB-228ENST00000523517 KRTAP7-1Q8IUC3 87 aa11.53□□□□□ -0.56
IKBKB-228ENST00000523517 CMYA5Q8N3K9 4069 aa11.53□□□□□ -0.56
IKBKB-228ENST00000523517 SNURFQ9Y675 71 aa11.53□□□□□ -0.56
IKBKB-228ENST00000523517 ETDCA0A1B0GVM5 59 aa11.52□□□□□ -0.57
IKBKB-228ENST00000523517 IGKV4-1P06312 121 aa11.52□□□□□ -0.57
IKBKB-228ENST00000523517 BPY2O14599 106 aa11.52□□□□□ -0.57
IKBKB-228ENST00000523517 RMI2Q96E14 147 aa11.51□□□□□ -0.57
IKBKB-228ENST00000523517 ST20-AS1Q8NBB2 130 aa11.49□□□□□ -0.57
IKBKB-228ENST00000523517 FUSP35637 526 aaKnown RBP eCLIP11.48□□□□□ -0.57
IKBKB-228ENST00000523517 DNAH3Q8TD57 4116 aa11.48□□□□□ -0.57
IKBKB-228ENST00000523517 TNP2Q05952 138 aa11.47□□□□□ -0.57
IKBKB-228ENST00000523517 MRPL55Q7Z7F7 128 aaKnown RBP11.47□□□□□ -0.57
IKBKB-228ENST00000523517 DNAH1Q9P2D7 4330 aa11.47□□□□□ -0.57
IKBKB-228ENST00000523517 A0A1W2PNM2 257 aa11.47□□□□□ -0.57
IKBKB-228ENST00000523517 PRB2P02812 416 aaPredicted RBP11.47□□□□□ -0.57
IKBKB-228ENST00000523517 A0A1B0GW54 56 aa11.46□□□□□ -0.57
IKBKB-228ENST00000523517 FBN1P35555 2871 aaKnown RBP11.45□□□□□ -0.58
IKBKB-228ENST00000523517 C1orf137Q5JT78 98 aa11.45□□□□□ -0.58
IKBKB-228ENST00000523517 F8P00451 2351 aa11.45□□□□□ -0.58
IKBKB-228ENST00000523517 F8WEM9 126 aa11.44□□□□□ -0.58
IKBKB-228ENST00000523517 ERC2-IT1O76042 136 aa11.44□□□□□ -0.58
IKBKB-228ENST00000523517 NDUFC1O43677 76 aa11.43□□□□□ -0.58
IKBKB-228ENST00000523517 Q8NBF4 154 aa11.42□□□□□ -0.58
IKBKB-228ENST00000523517 SERP1Q9Y6X1 66 aa11.42□□□□□ -0.58
IKBKB-228ENST00000523517 UBE2BP63146 152 aa11.41□□□□□ -0.58
IKBKB-228ENST00000523517 TMEM254Q8TBM7 123 aa11.41□□□□□ -0.58
IKBKB-228ENST00000523517 OCR1Q9BZK8 76 aa11.41□□□□□ -0.58
IKBKB-228ENST00000523517 EPM2AB3EWF7 344 aa11.41□□□□□ -0.58
IKBKB-228ENST00000523517 REG3GQ6UW15 175 aa11.4□□□□□ -0.58
IKBKB-228ENST00000523517 STAB1Q9NY15 2570 aa11.4□□□□□ -0.58
IKBKB-228ENST00000523517 Q5XG85 94 aa11.4□□□□□ -0.58
IKBKB-228ENST00000523517 SPRR4Q96PI1 79 aa11.39□□□□□ -0.59
IKBKB-228ENST00000523517 FLNBO75369 2602 aaKnown RBP11.38□□□□□ -0.59
IKBKB-228ENST00000523517 K7EIL1 84 aa11.38□□□□□ -0.59
IKBKB-228ENST00000523517 C5orf47Q569G3 176 aa11.36□□□□□ -0.59
IKBKB-228ENST00000523517 C4orf26Q17RF5 130 aa11.36□□□□□ -0.59
IKBKB-228ENST00000523517 MAST4O15021 2626 aa11.36□□□□□ -0.59
IKBKB-228ENST00000523517 SMIM29Q86T20 159 aa11.35□□□□□ -0.59
IKBKB-228ENST00000523517 HUWE1Q7Z6Z7 4374 aaKnown RBP11.35□□□□□ -0.59
IKBKB-228ENST00000523517 A0A0U1RQV1 116 aa11.33□□□□□ -0.6
IKBKB-228ENST00000523517 A0A096LNI7 61 aa11.32□□□□□ -0.6
IKBKB-228ENST00000523517 ATP5EP56381 51 aaPredicted RBP11.32□□□□□ -0.6
IKBKB-228ENST00000523517 C16orf90A8MZG2 172 aa11.31□□□□□ -0.6
IKBKB-228ENST00000523517 LINC00476Q8WZB0 136 aa11.31□□□□□ -0.6
IKBKB-228ENST00000523517 KRTAP1-5Q9BYS1 174 aa11.31□□□□□ -0.6
IKBKB-228ENST00000523517 NOTCH1P46531 2555 aa11.31□□□□□ -0.6
IKBKB-228ENST00000523517 DSCR10P59022 87 aa11.31□□□□□ -0.6
IKBKB-228ENST00000523517 IGKV2-24A0A0C4DH68 120 aa11.3□□□□□ -0.6
IKBKB-228ENST00000523517 CNBPP62633 177 aaKnown RBP11.3□□□□□ -0.6
IKBKB-228ENST00000523517 A0A1W2PNN7 141 aa11.29□□□□□ -0.6
IKBKB-228ENST00000523517 HRCT1Q6UXD1 115 aa11.28□□□□□ -0.6
IKBKB-228ENST00000523517 FAM30AQ9NZY2 134 aa11.28□□□□□ -0.6
IKBKB-228ENST00000523517 PRLHP81277 87 aa11.27□□□□□ -0.6
IKBKB-228ENST00000523517 HIGD2AQ9BW72 106 aa11.27□□□□□ -0.61
IKBKB-228ENST00000523517 A0A0G2JQZ4 141 aa11.26□□□□□ -0.61
IKBKB-228ENST00000523517 K7EQZ3 153 aa11.26□□□□□ -0.61
IKBKB-228ENST00000523517 PSCAO43653 123 aa11.26□□□□□ -0.61
IKBKB-228ENST00000523517 IGFL1Q6UW32 110 aa11.26□□□□□ -0.61
IKBKB-228ENST00000523517 SMIM26A0A096LP01 95 aa11.24□□□□□ -0.61
IKBKB-228ENST00000523517 LCE6AA0A183 80 aa11.23□□□□□ -0.61
IKBKB-228ENST00000523517 IGLV8-61A0A075B6I0 122 aa11.22□□□□□ -0.61
IKBKB-228ENST00000523517 BAHCC1Q9P281 2608 aa11.21□□□□□ -0.61
IKBKB-228ENST00000523517 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.2□□□□□ -0.62
IKBKB-228ENST00000523517 UBE2DNLQ8IWF7 75 aa11.2□□□□□ -0.62
IKBKB-228ENST00000523517 FP248Q71RG6 208 aaPredicted RBP11.2□□□□□ -0.62
IKBKB-228ENST00000523517 HCG22E2RYF7 251 aa11.18□□□□□ -0.62
IKBKB-228ENST00000523517 C14orf177Q52M58 125 aa11.18□□□□□ -0.62
IKBKB-228ENST00000523517 KRTAP11-1Q8IUC1 163 aa11.18□□□□□ -0.62
IKBKB-228ENST00000523517 APLNQ9ULZ1 77 aa11.18□□□□□ -0.62
IKBKB-228ENST00000523517 NBEAL1Q6ZS30 2694 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms