RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CDKN2A-AS1Q9UH64 79 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 ZNF706Q9Y5V0 76 aaPredicted RBP2.16□□□□□ -2.06
HTT-210ENST00000512909 DNAH1Q9P2D7 4330 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 PLECQ15149 4684 aaKnown RBP2.15□□□□□ -2.06
HTT-210ENST00000512909 IGIPA6NJ69 53 aa2.15□□□□□ -2.07
HTT-210ENST00000512909 H3BRM9 83 aa2.15□□□□□ -2.07
HTT-210ENST00000512909 K7EMI3 77 aa2.15□□□□□ -2.07
HTT-210ENST00000512909 SPINK6Q6UWN8 80 aa2.15□□□□□ -2.07
HTT-210ENST00000512909 BAGE3Q86Y29 109 aa2.15□□□□□ -2.07
HTT-210ENST00000512909 COX7B2Q8TF08 81 aa2.15□□□□□ -2.07
HTT-210ENST00000512909 ZNF625Q96I27 306 aaPredicted RBP2.15□□□□□ -2.07
HTT-210ENST00000512909 CST9LQ9H4G1 147 aa2.15□□□□□ -2.07
HTT-210ENST00000512909 XAGE1AQ9HD64 81 aa2.15□□□□□ -2.07
HTT-210ENST00000512909 MRPL35Q9NZE8 188 aaKnown RBP2.15□□□□□ -2.07
HTT-210ENST00000512909 A0A0B4J2C4 111 aa2.14□□□□□ -2.07
HTT-210ENST00000512909 TRBV30A0A0K0K1B3 111 aa2.14□□□□□ -2.07
HTT-210ENST00000512909 TINCRA0A1B0GVN0 87 aa2.14□□□□□ -2.07
HTT-210ENST00000512909 LINC01549A6NIU2 74 aa2.14□□□□□ -2.07
HTT-210ENST00000512909 F8VRH5 84 aa2.14□□□□□ -2.07
HTT-210ENST00000512909 M0QXV9 152 aa2.14□□□□□ -2.07
HTT-210ENST00000512909 S100A2P29034 98 aa2.14□□□□□ -2.07
HTT-210ENST00000512909 LINC00158P58513 81 aa2.14□□□□□ -2.07
HTT-210ENST00000512909 CIRBPQ14011 172 aaKnown RBP2.14□□□□□ -2.07
HTT-210ENST00000512909 PDZD11Q5EBL8 140 aa2.14□□□□□ -2.07
HTT-210ENST00000512909 AMELXQ99217 191 aa2.14□□□□□ -2.07
HTT-210ENST00000512909 PSORS1C2Q9UIG4 136 aa2.14□□□□□ -2.07
HTT-210ENST00000512909 CARHSP1Q9Y2V2 147 aaKnown RBP2.14□□□□□ -2.07
HTT-210ENST00000512909 H3BQ85 93 aa2.13□□□□□ -2.07
HTT-210ENST00000512909 HBDP02042 147 aa2.13□□□□□ -2.07
HTT-210ENST00000512909 FABP4P15090 132 aa2.13□□□□□ -2.07
HTT-210ENST00000512909 KRTAP10-4P60372 401 aaPredicted RBP2.13□□□□□ -2.07
HTT-210ENST00000512909 C10orf91Q5T1B1 145 aa2.13□□□□□ -2.07
HTT-210ENST00000512909 Q8IZM0 81 aa2.13□□□□□ -2.07
HTT-210ENST00000512909 FAM19A2Q8N3H0 131 aa2.13□□□□□ -2.07
HTT-210ENST00000512909 C18orf32Q8TCD1 76 aa2.13□□□□□ -2.07
HTT-210ENST00000512909 DIRC1Q969H9 104 aa2.13□□□□□ -2.07
HTT-210ENST00000512909 HIGD2AQ9BW72 106 aa2.13□□□□□ -2.07
HTT-210ENST00000512909 C22orf24Q9Y442 160 aa2.13□□□□□ -2.07
HTT-210ENST00000512909 HECTD4Q9Y4D8 3996 aa2.12□□□□□ -2.07
HTT-210ENST00000512909 TRGC2P03986 189 aa2.12□□□□□ -2.07
HTT-210ENST00000512909 HRES1P13985 223 aa2.12□□□□□ -2.07
HTT-210ENST00000512909 MEIG1Q5JSS6 88 aa2.12□□□□□ -2.07
HTT-210ENST00000512909 C3orf22Q8N5N4 141 aa2.12□□□□□ -2.07
HTT-210ENST00000512909 IFI27L1Q96BM0 104 aa2.12□□□□□ -2.07
HTT-210ENST00000512909 LINC01600Q96MT4 127 aa2.12□□□□□ -2.07
HTT-210ENST00000512909 SACSQ9NZJ4 4579 aa2.12□□□□□ -2.07
HTT-210ENST00000512909 VPS13DQ5THJ4 4388 aa2.11□□□□□ -2.07
HTT-210ENST00000512909 C11orf86A6NJI1 115 aa2.11□□□□□ -2.07
HTT-210ENST00000512909 P0C880 135 aa2.11□□□□□ -2.07
HTT-210ENST00000512909 FAM19A3Q7Z5A8 133 aa2.11□□□□□ -2.07
HTT-210ENST00000512909 CHCHD1Q96BP2 118 aaKnown RBP2.11□□□□□ -2.07
HTT-210ENST00000512909 ERG28Q9UKR5 140 aa2.11□□□□□ -2.07
HTT-210ENST00000512909 R4GN34 69 aa2.11□□□□□ -2.07
HTT-210ENST00000512909 FRAS1Q86XX4 4008 aa2.1□□□□□ -2.07
HTT-210ENST00000512909 DNAH10Q8IVF4 4471 aa2.1□□□□□ -2.07
HTT-210ENST00000512909 DNAH6Q9C0G6 4158 aa2.1□□□□□ -2.07
HTT-210ENST00000512909 A6NED7 52 aa2.1□□□□□ -2.07
HTT-210ENST00000512909 LINC01546A6NGU7 62 aa2.1□□□□□ -2.07
HTT-210ENST00000512909 LEPROTL1O95214 131 aa2.1□□□□□ -2.07
HTT-210ENST00000512909 SMIM13P0DJ93 91 aa2.1□□□□□ -2.07
HTT-210ENST00000512909 IGLC3P0DOY3 106 aa2.1□□□□□ -2.07
HTT-210ENST00000512909 ZNF22P17026 224 aaPredicted RBP2.1□□□□□ -2.07
HTT-210ENST00000512909 RPL28P46779 137 aaKnown RBP2.1□□□□□ -2.07
HTT-210ENST00000512909 FAM19A1Q7Z5A9 133 aa2.1□□□□□ -2.07
HTT-210ENST00000512909 LINC00337Q8N6G1 96 aa2.1□□□□□ -2.07
HTT-210ENST00000512909 PMCHL2Q9BQD1 86 aa2.1□□□□□ -2.07
HTT-210ENST00000512909 PKD1P98161 4303 aa2.09□□□□□ -2.07
HTT-210ENST00000512909 MYMXA0A1B0GTQ4 84 aa2.09□□□□□ -2.07
HTT-210ENST00000512909 NCR3O14931 201 aa2.09□□□□□ -2.07
HTT-210ENST00000512909 NUPR1O60356 82 aa2.09□□□□□ -2.07
HTT-210ENST00000512909 MT1HL1P0DM35 61 aa2.09□□□□□ -2.07
HTT-210ENST00000512909 LGALS3P17931 250 aaKnown RBP2.09□□□□□ -2.07
HTT-210ENST00000512909 NPC2P61916 151 aa2.09□□□□□ -2.07
HTT-210ENST00000512909 S100A12P80511 92 aa2.09□□□□□ -2.07
HTT-210ENST00000512909 BOD1L2Q8IYS8 172 aa2.09□□□□□ -2.07
HTT-210ENST00000512909 HSPB8Q9UJY1 196 aa2.09□□□□□ -2.07
HTT-210ENST00000512909 DNAH17Q9UFH2 4485 aa2.09□□□□□ -2.08
HTT-210ENST00000512909 HERC2O95714 4834 aa2.09□□□□□ -2.08
HTT-210ENST00000512909 KIAA1109Q2LD37 5005 aa2.09□□□□□ -2.08
HTT-210ENST00000512909 IGKV2D-26A0A0A0MRZ7 120 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 TRAV12-1A0A0B4J245 112 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 LINC00587B1AMM8 73 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 TMEM238C9JI98 176 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 M0R378 163 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 LEPROTO15243 131 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 BCE1O60756 84 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 DPM2O94777 84 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 IGKCP01834 107 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 CRYGAP11844 174 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 COX17Q14061 63 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 S100A7L2Q5SY68 101 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 OR13C6PQ8NH95 151 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 PLEKHB2Q96CS7 222 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 MIEN1Q9BRT3 115 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 NDUFA12Q9UI09 145 aa2.08□□□□□ -2.08
HTT-210ENST00000512909 SRRM2Q9UQ35 2752 aaKnown RBP2.08□□□□□ -2.08
HTT-210ENST00000512909 ETDCA0A1B0GVM5 59 aa2.07□□□□□ -2.08
HTT-210ENST00000512909 PLNP26678 52 aa2.07□□□□□ -2.08
HTT-210ENST00000512909 KRTDAPP60985 99 aa2.07□□□□□ -2.08
HTT-210ENST00000512909 PRLHP81277 87 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms