RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
CLCN3-208ENST00000512813 MTURNQ8N3F0 131 aa4.27□□□□□ -1.73
CLCN3-208ENST00000512813 H3BRM9 83 aa4.26□□□□□ -1.73
CLCN3-208ENST00000512813 AKR1D1P51857 326 aa4.26□□□□□ -1.73
CLCN3-208ENST00000512813 LINC00158P58513 81 aa4.26□□□□□ -1.73
CLCN3-208ENST00000512813 SFTA2Q6UW10 78 aa4.26□□□□□ -1.73
CLCN3-208ENST00000512813 DDTP30046 118 aa4.25□□□□□ -1.73
CLCN3-208ENST00000512813 ORMDL2Q53FV1 153 aa4.25□□□□□ -1.73
CLCN3-208ENST00000512813 ORMDL3Q8N138 153 aa4.25□□□□□ -1.73
CLCN3-208ENST00000512813 A0A1B0GW15 77 aa4.24□□□□□ -1.73
CLCN3-208ENST00000512813 TEX46H3BTG2 121 aa4.24□□□□□ -1.73
CLCN3-208ENST00000512813 RPL23P62829 140 aaKnown RBP4.24□□□□□ -1.73
CLCN3-208ENST00000512813 PMVKQ15126 192 aa4.24□□□□□ -1.73
CLCN3-208ENST00000512813 NOTCH2NLQ7Z3S9 236 aa4.24□□□□□ -1.73
CLCN3-208ENST00000512813 OSTCQ9NRP0 149 aa4.24□□□□□ -1.73
CLCN3-208ENST00000512813 NAT8BQ9UHF3 227 aa4.24□□□□□ -1.73
CLCN3-208ENST00000512813 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
CLCN3-208ENST00000512813 Q8N8P6 123 aa4.23□□□□□ -1.73
CLCN3-208ENST00000512813 PRELID3AQ96N28 172 aa4.23□□□□□ -1.73
CLCN3-208ENST00000512813 V9GYV3 84 aa4.23□□□□□ -1.73
CLCN3-208ENST00000512813 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
CLCN3-208ENST00000512813 A0A0U1RRA0 63 aa4.22□□□□□ -1.73
CLCN3-208ENST00000512813 F8W036 122 aa4.22□□□□□ -1.73
CLCN3-208ENST00000512813 ARPC5O15511 151 aa4.22□□□□□ -1.73
CLCN3-208ENST00000512813 FAM74A3Q4VXF1 159 aa4.22□□□□□ -1.73
CLCN3-208ENST00000512813 TMEM136Q6ZRR5 245 aa4.22□□□□□ -1.73
CLCN3-208ENST00000512813 K7EMI3 77 aa4.21□□□□□ -1.74
CLCN3-208ENST00000512813 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
CLCN3-208ENST00000512813 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.74
CLCN3-208ENST00000512813 MAP1LC3AQ9H492 121 aa4.21□□□□□ -1.74
CLCN3-208ENST00000512813 S100A8P05109 93 aa4.2□□□□□ -1.74
CLCN3-208ENST00000512813 NDUFA6P56556 154 aa4.2□□□□□ -1.74
CLCN3-208ENST00000512813 ERASQ7Z444 233 aa4.2□□□□□ -1.74
CLCN3-208ENST00000512813 TOMM6Q96B49 74 aa4.2□□□□□ -1.74
CLCN3-208ENST00000512813 CST9LQ9H4G1 147 aa4.2□□□□□ -1.74
CLCN3-208ENST00000512813 LAMTOR2Q9Y2Q5 125 aa4.2□□□□□ -1.74
CLCN3-208ENST00000512813 TRAV23DV6A0A075B6W5 121 aa4.19□□□□□ -1.74
CLCN3-208ENST00000512813 TRBV10-2A0A0K0K1G8 114 aa4.19□□□□□ -1.74
CLCN3-208ENST00000512813 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
CLCN3-208ENST00000512813 TMEM250H0YL14 139 aa4.18□□□□□ -1.74
CLCN3-208ENST00000512813 ZNF73O43830 326 aaPredicted RBP4.18□□□□□ -1.74
CLCN3-208ENST00000512813 G0S2P27469 103 aa4.18□□□□□ -1.74
CLCN3-208ENST00000512813 IFITM3Q01628 133 aa4.18□□□□□ -1.74
CLCN3-208ENST00000512813 FA2HQ7L5A8 372 aa4.18□□□□□ -1.74
CLCN3-208ENST00000512813 A0A1B0GXF2 115 aa4.17□□□□□ -1.74
CLCN3-208ENST00000512813 SMIM27A0A1W2PRY6 76 aa4.17□□□□□ -1.74
CLCN3-208ENST00000512813 ATP6V1G1O75348 118 aa4.17□□□□□ -1.74
CLCN3-208ENST00000512813 SMIM13P0DJ93 91 aa4.17□□□□□ -1.74
CLCN3-208ENST00000512813 MIR7-3HGQ8N6C7 128 aa4.17□□□□□ -1.74
CLCN3-208ENST00000512813 IGLC3P0DOY3 106 aa4.16□□□□□ -1.74
CLCN3-208ENST00000512813 ZNF22P17026 224 aaPredicted RBP4.16□□□□□ -1.74
CLCN3-208ENST00000512813 ADCYAP1P18509 176 aa4.16□□□□□ -1.74
CLCN3-208ENST00000512813 ZNF345Q14585 488 aa4.16□□□□□ -1.74
CLCN3-208ENST00000512813 SCGB3A1Q96QR1 104 aa4.16□□□□□ -1.74
CLCN3-208ENST00000512813 MRPL54Q6P161 138 aaKnown RBP4.15□□□□□ -1.75
CLCN3-208ENST00000512813 DHRS4-AS1Q9P1J3 65 aa4.15□□□□□ -1.75
CLCN3-208ENST00000512813 TEX49A0A1B0GTD5 131 aa4.14□□□□□ -1.75
CLCN3-208ENST00000512813 SPANXB1Q9NS25 103 aaPredicted RBP4.14□□□□□ -1.75
CLCN3-208ENST00000512813 TAL2Q16559 108 aa4.13□□□□□ -1.75
CLCN3-208ENST00000512813 S100A7L2Q5SY68 101 aa4.13□□□□□ -1.75
CLCN3-208ENST00000512813 S100ZQ8WXG8 99 aa4.13□□□□□ -1.75
CLCN3-208ENST00000512813 SMIM7Q9BQ49 75 aa4.13□□□□□ -1.75
CLCN3-208ENST00000512813 NXT2Q9NPJ8 142 aaKnown RBP4.13□□□□□ -1.75
CLCN3-208ENST00000512813 HINT1P49773 126 aaPredicted RBP4.12□□□□□ -1.75
CLCN3-208ENST00000512813 LINC00299Q6ZSB3 139 aa4.12□□□□□ -1.75
CLCN3-208ENST00000512813 DEFB105AQ8NG35 78 aa4.12□□□□□ -1.75
CLCN3-208ENST00000512813 FAM218AQ96MZ4 157 aa4.12□□□□□ -1.75
CLCN3-208ENST00000512813 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
CLCN3-208ENST00000512813 KANTRA0A1W2PQU2 76 aa4.11□□□□□ -1.75
CLCN3-208ENST00000512813 CEBPGP53567 150 aa4.11□□□□□ -1.75
CLCN3-208ENST00000512813 MEIG1Q5JSS6 88 aa4.11□□□□□ -1.75
CLCN3-208ENST00000512813 SPRR2GQ9BYE4 73 aa4.11□□□□□ -1.75
CLCN3-208ENST00000512813 IMUPQ9GZP8 106 aa4.11□□□□□ -1.75
CLCN3-208ENST00000512813 TRBV7-7A0A0K0K1E9 115 aa4.09□□□□□ -1.75
CLCN3-208ENST00000512813 A0A1W2PNM2 257 aa4.09□□□□□ -1.75
CLCN3-208ENST00000512813 LINC01549A6NIU2 74 aa4.09□□□□□ -1.75
CLCN3-208ENST00000512813 BATF3Q9NR55 127 aa4.08□□□□□ -1.76
CLCN3-208ENST00000512813 ATP5L2Q7Z4Y8 100 aa4.07□□□□□ -1.76
CLCN3-208ENST00000512813 CBY1Q9Y3M2 126 aa4.07□□□□□ -1.76
CLCN3-208ENST00000512813 IGLV5-48A0A075B6I7 105 aa4.06□□□□□ -1.76
CLCN3-208ENST00000512813 LINC00587B1AMM8 73 aa4.06□□□□□ -1.76
CLCN3-208ENST00000512813 NDUFC2O95298 119 aa4.06□□□□□ -1.76
CLCN3-208ENST00000512813 MAP1LC3CQ9BXW4 147 aa4.06□□□□□ -1.76
CLCN3-208ENST00000512813 C11orf86A6NJI1 115 aa4.05□□□□□ -1.76
CLCN3-208ENST00000512813 LST1O00453 97 aa4.05□□□□□ -1.76
CLCN3-208ENST00000512813 DSCR10P59022 87 aa4.05□□□□□ -1.76
CLCN3-208ENST00000512813 ELOF1P60002 83 aaKnown RBP4.05□□□□□ -1.76
CLCN3-208ENST00000512813 HERV-K104P63124 156 aa4.05□□□□□ -1.76
CLCN3-208ENST00000512813 TMEM170BQ5T4T1 132 aa4.05□□□□□ -1.76
CLCN3-208ENST00000512813 SMLR1H3BR10 107 aa4.03□□□□□ -1.76
CLCN3-208ENST00000512813 COMMD7Q86VX2 200 aa4.03□□□□□ -1.76
CLCN3-208ENST00000512813 COX7BP24311 80 aa4.01□□□□□ -1.77
CLCN3-208ENST00000512813 ADIRFQ15847 76 aa4.01□□□□□ -1.77
CLCN3-208ENST00000512813 CLEC2BQ92478 149 aa4.01□□□□□ -1.77
CLCN3-208ENST00000512813 MIEN1Q9BRT3 115 aa4.01□□□□□ -1.77
CLCN3-208ENST00000512813 TMEM223A0PJW6 202 aa3.99□□□□□ -1.77
CLCN3-208ENST00000512813 LINC01546A6NGU7 62 aa3.99□□□□□ -1.77
CLCN3-208ENST00000512813 SPINK7P58062 85 aa3.99□□□□□ -1.77
CLCN3-208ENST00000512813 SOSTDC1Q6X4U4 206 aa3.99□□□□□ -1.77
CLCN3-208ENST00000512813 WFDC13Q8IUB5 93 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms