RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 HMGN4O00479 90 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 TFF1P04155 84 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 IGHV1-8P0DP01 117 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 RPL27AP46776 148 aaKnown RBP2.29□□□□□ -2.04
PDE4D-220ENST00000512069 PLGLAQ15195 96 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 C10orf128Q5T292 105 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 Q5VSD8 79 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 FAM27BQ5VT28 67 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 SPTSSBQ8NFR3 76 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 CYP4F30PQ9H0H9 118 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 XAGE1AQ9HD64 81 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 ZNF355PQ9NSJ1 428 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 PRO1854Q9UHT4 67 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 RNF213Q63HN8 5207 aa2.29□□□□□ -2.04
PDE4D-220ENST00000512069 IGHV3-72A0A0B4J1Y9 119 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 TMEM223A0PJW6 202 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 HCG22E2RYF7 251 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 F8WEM9 126 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 IGLV1-51P01701 117 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 CCL3L1P16619 93 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 FCER1GP30273 86 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 FXYD7P58549 80 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 TSPEAR-AS2P59090 65 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 FAM229BQ4G0N7 80 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 GDF5OSQ5U4N7 250 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 GAFA1Q96PS6 74 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 TTTY13Q9BZ97 58 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 APLNQ9ULZ1 77 aa2.28□□□□□ -2.04
PDE4D-220ENST00000512069 IGHV3-74A0A0B4J1X5 117 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 IGKV1-6A0A0C4DH72 117 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 CTXND1A0A1B0GTU2 59 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 SMIM27A0A1W2PRY6 76 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 J3QRE1 110 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 IGKV1-39P01597 117 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 IGKV1D-39P04432 117 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 MIFP14174 115 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 NPPCP23582 126 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 FXYD6P3P58550 94 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 PRR9Q5T870 116 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 MINOS1Q5TGZ0 78 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 SFTA2Q6UW10 78 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 ZNF818PQ6ZRF7 136 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 Q8N6K4 173 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 PFN4Q8NHR9 129 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 SMCR5Q8TEV8 140 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 RETNLBQ9BQ08 111 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 C11orf1Q9H5F2 150 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 PSENENQ9NZ42 101 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 UBE2D4Q9Y2X8 147 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 TIMM9Q9Y5J7 89 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 MINOS1-NBL1R4GNA1 71 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 V9GYV3 84 aa2.27□□□□□ -2.05
PDE4D-220ENST00000512069 TRAV22A0A0B4J277 110 aa2.26□□□□□ -2.05
PDE4D-220ENST00000512069 TRBV10-3A0A0K0K1G6 114 aa2.26□□□□□ -2.05
PDE4D-220ENST00000512069 C17orf98A8MV24 154 aa2.26□□□□□ -2.05
PDE4D-220ENST00000512069 E7EUB6 86 aa2.26□□□□□ -2.05
PDE4D-220ENST00000512069 ERC2-IT1O76042 136 aa2.26□□□□□ -2.05
PDE4D-220ENST00000512069 C9orf116Q5BN46 136 aaPredicted RBP2.26□□□□□ -2.05
PDE4D-220ENST00000512069 ATP5EP2Q5VTU8 51 aa2.26□□□□□ -2.05
PDE4D-220ENST00000512069 C5orf56Q8N8D9 126 aa2.26□□□□□ -2.05
PDE4D-220ENST00000512069 FAM167A-AS1Q96KT0 104 aa2.26□□□□□ -2.05
PDE4D-220ENST00000512069 WFDC6Q9BQY6 131 aa2.26□□□□□ -2.05
PDE4D-220ENST00000512069 WFDC10AQ9H1F0 79 aa2.26□□□□□ -2.05
PDE4D-220ENST00000512069 IGHV3-43A0A0B4J1X8 118 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 TRBV30A0A0K0K1B3 111 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 hDV103S1A0JD37 113 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 ZNF815PA8K554 130 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 SH2D1AO60880 128 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 IGHV3-11P01762 117 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 SUPT4H1P63272 117 aaKnown RBP2.25□□□□□ -2.05
PDE4D-220ENST00000512069 C1orf134Q5TEV5 83 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 ZFAND2AQ8N6M9 145 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 LIMD2Q9BT23 127 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 FGF23Q9GZV9 251 aaPredicted RBP2.25□□□□□ -2.05
PDE4D-220ENST00000512069 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 TMEM14AQ9Y6G1 99 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 FAT1Q14517 4588 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 DNAH5Q8TE73 4624 aa2.25□□□□□ -2.05
PDE4D-220ENST00000512069 SDHAF1A6NFY7 115 aa2.24□□□□□ -2.05
PDE4D-220ENST00000512069 CPSF4LA6NMK7 179 aaKnown RBP2.24□□□□□ -2.05
PDE4D-220ENST00000512069 TMEM14DPA8MWL7 114 aa2.24□□□□□ -2.05
PDE4D-220ENST00000512069 CHKB-CPT1BH3BT56 60 aa2.24□□□□□ -2.05
PDE4D-220ENST00000512069 COX6CP09669 75 aa2.24□□□□□ -2.05
PDE4D-220ENST00000512069 IGHV3-30-3P0DP02 117 aa2.24□□□□□ -2.05
PDE4D-220ENST00000512069 EDDM3BP56851 147 aa2.24□□□□□ -2.05
PDE4D-220ENST00000512069 NTM-AS1Q6ZSK4 140 aa2.24□□□□□ -2.05
PDE4D-220ENST00000512069 Q8N814 137 aa2.24□□□□□ -2.05
PDE4D-220ENST00000512069 CAMK2N2Q96S95 79 aa2.24□□□□□ -2.05
PDE4D-220ENST00000512069 LINC00574Q9H8X3 128 aa2.24□□□□□ -2.05
PDE4D-220ENST00000512069 VPS13BQ7Z7G8 4022 aa2.23□□□□□ -2.05
PDE4D-220ENST00000512069 IGKV2D-26A0A0A0MRZ7 120 aa2.23□□□□□ -2.05
PDE4D-220ENST00000512069 K7EMI3 77 aa2.23□□□□□ -2.05
PDE4D-220ENST00000512069 IGHV3-33P01772 117 aa2.23□□□□□ -2.05
PDE4D-220ENST00000512069 CGB3P0DN86 165 aa2.23□□□□□ -2.05
PDE4D-220ENST00000512069 CGB7P0DN87 165 aa2.23□□□□□ -2.05
PDE4D-220ENST00000512069 CMC4P56277 68 aaPredicted RBP2.23□□□□□ -2.05
PDE4D-220ENST00000512069 MIAQ16674 131 aa2.23□□□□□ -2.05
PDE4D-220ENST00000512069 DEFB135Q30KP9 77 aa2.23□□□□□ -2.05
PDE4D-220ENST00000512069 Q5VV11 94 aa2.23□□□□□ -2.05
PDE4D-220ENST00000512069 Q8IYB0 196 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms