RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 HSBP1O75506 76 aa3.35□□□□□ -1.87
LSM3P4-201ENST00000502948 PLNP26678 52 aa3.35□□□□□ -1.87
LSM3P4-201ENST00000502948 CD164Q04900 197 aa3.35□□□□□ -1.87
LSM3P4-201ENST00000502948 Q5XG85 94 aa3.35□□□□□ -1.87
LSM3P4-201ENST00000502948 SVBPQ8N300 66 aa3.35□□□□□ -1.87
LSM3P4-201ENST00000502948 YPEL4Q96NS1 127 aa3.35□□□□□ -1.87
LSM3P4-201ENST00000502948 MIEN1Q9BRT3 115 aa3.35□□□□□ -1.87
LSM3P4-201ENST00000502948 TRAV23DV6A0A075B6W5 121 aa3.34□□□□□ -1.87
LSM3P4-201ENST00000502948 IGLV9-49A0A0B4J1Y8 123 aa3.34□□□□□ -1.87
LSM3P4-201ENST00000502948 J3QQQ9 107 aa3.34□□□□□ -1.87
LSM3P4-201ENST00000502948 ZNF73O43830 326 aaPredicted RBP3.34□□□□□ -1.87
LSM3P4-201ENST00000502948 NDUFA5Q16718 116 aa3.34□□□□□ -1.87
LSM3P4-201ENST00000502948 S100A7L2Q5SY68 101 aa3.34□□□□□ -1.87
LSM3P4-201ENST00000502948 LEPROTL1O95214 131 aa3.33□□□□□ -1.88
LSM3P4-201ENST00000502948 HINT1P49773 126 aaPredicted RBP3.33□□□□□ -1.88
LSM3P4-201ENST00000502948 TSPEAR-AS2P59090 65 aa3.33□□□□□ -1.88
LSM3P4-201ENST00000502948 HERVK_113P61574 105 aa3.33□□□□□ -1.88
LSM3P4-201ENST00000502948 MT1HP80294 61 aa3.33□□□□□ -1.88
LSM3P4-201ENST00000502948 ANKRD39Q53RE8 183 aa3.33□□□□□ -1.88
LSM3P4-201ENST00000502948 APOC3P02656 99 aa3.32□□□□□ -1.88
LSM3P4-201ENST00000502948 DHRS4-AS1Q9P1J3 65 aa3.32□□□□□ -1.88
LSM3P4-201ENST00000502948 TRBV7-6A0A0J9YX20 115 aa3.31□□□□□ -1.88
LSM3P4-201ENST00000502948 TIMM17BO60830 172 aa3.31□□□□□ -1.88
LSM3P4-201ENST00000502948 DPM2O94777 84 aa3.31□□□□□ -1.88
LSM3P4-201ENST00000502948 LGALS3P17931 250 aaKnown RBP3.31□□□□□ -1.88
LSM3P4-201ENST00000502948 C9orf153Q5TBE3 101 aa3.31□□□□□ -1.88
LSM3P4-201ENST00000502948 SPANXCQ9NY87 97 aa3.31□□□□□ -1.88
LSM3P4-201ENST00000502948 LAMTOR3Q9UHA4 124 aa3.31□□□□□ -1.88
LSM3P4-201ENST00000502948 HSPB8Q9UJY1 196 aa3.31□□□□□ -1.88
LSM3P4-201ENST00000502948 A0A0J9YXY3 114 aa3.3□□□□□ -1.88
LSM3P4-201ENST00000502948 E9PLD3 99 aa3.3□□□□□ -1.88
LSM3P4-201ENST00000502948 IGKCP01834 107 aa3.3□□□□□ -1.88
LSM3P4-201ENST00000502948 LINC00310P59036 64 aa3.3□□□□□ -1.88
LSM3P4-201ENST00000502948 PCOTHQ58A44 107 aa3.3□□□□□ -1.88
LSM3P4-201ENST00000502948 SOSTDC1Q6X4U4 206 aa3.3□□□□□ -1.88
LSM3P4-201ENST00000502948 SPANXDQ9BXN6 97 aa3.3□□□□□ -1.88
LSM3P4-201ENST00000502948 IGLV8-61A0A075B6I0 122 aa3.29□□□□□ -1.88
LSM3P4-201ENST00000502948 ELOF1P60002 83 aaKnown RBP3.29□□□□□ -1.88
LSM3P4-201ENST00000502948 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
LSM3P4-201ENST00000502948 C21orf62-AS1Q17RA5 79 aa3.29□□□□□ -1.88
LSM3P4-201ENST00000502948 ADAMTSL4-AS1Q5T5F5 129 aa3.29□□□□□ -1.88
LSM3P4-201ENST00000502948 LINC00518Q8N0U6 118 aa3.29□□□□□ -1.88
LSM3P4-201ENST00000502948 ST20-AS1Q8NBB2 130 aa3.29□□□□□ -1.88
LSM3P4-201ENST00000502948 LITAFQ99732 161 aa3.29□□□□□ -1.88
LSM3P4-201ENST00000502948 PRO1933Q9H354 126 aa3.29□□□□□ -1.88
LSM3P4-201ENST00000502948 IGLV5-48A0A075B6I7 105 aa3.28□□□□□ -1.88
LSM3P4-201ENST00000502948 TEX49A0A1B0GTD5 131 aa3.28□□□□□ -1.88
LSM3P4-201ENST00000502948 SERF1AO75920 110 aa3.28□□□□□ -1.88
LSM3P4-201ENST00000502948 TRGC2P03986 189 aa3.28□□□□□ -1.88
LSM3P4-201ENST00000502948 LINC00308Q8TCZ7 52 aa3.28□□□□□ -1.88
LSM3P4-201ENST00000502948 TMA7Q9Y2S6 64 aaKnown RBP3.28□□□□□ -1.88
LSM3P4-201ENST00000502948 A4D1N5 150 aa3.27□□□□□ -1.89
LSM3P4-201ENST00000502948 AKR1D1P51857 326 aa3.27□□□□□ -1.89
LSM3P4-201ENST00000502948 RPL37P61927 97 aaKnown RBP3.27□□□□□ -1.89
LSM3P4-201ENST00000502948 A0A1B0GWB2 263 aa3.26□□□□□ -1.89
LSM3P4-201ENST00000502948 H0Y8G0 127 aa3.26□□□□□ -1.89
LSM3P4-201ENST00000502948 H7C2G1 150 aa3.26□□□□□ -1.89
LSM3P4-201ENST00000502948 COX7BP24311 80 aa3.26□□□□□ -1.89
LSM3P4-201ENST00000502948 SMIM29Q86T20 159 aa3.26□□□□□ -1.89
LSM3P4-201ENST00000502948 COPS9Q8WXC6 57 aa3.26□□□□□ -1.89
LSM3P4-201ENST00000502948 C9orf92A6NGG3 77 aa3.25□□□□□ -1.89
LSM3P4-201ENST00000502948 SYS1-DBNDD2H3BUS1 97 aa3.25□□□□□ -1.89
LSM3P4-201ENST00000502948 TAL2Q16559 108 aa3.25□□□□□ -1.89
LSM3P4-201ENST00000502948 C6orf99Q4VX62 202 aa3.25□□□□□ -1.89
LSM3P4-201ENST00000502948 C1orf195Q5TG92 126 aa3.25□□□□□ -1.89
LSM3P4-201ENST00000502948 LINC01545Q5VT33 79 aa3.25□□□□□ -1.89
LSM3P4-201ENST00000502948 Q6ZVH6 145 aa3.25□□□□□ -1.89
LSM3P4-201ENST00000502948 FLGP20930 4061 aaPredicted RBP3.24□□□□□ -1.89
LSM3P4-201ENST00000502948 FSIP2Q5CZC0 6907 aa3.24□□□□□ -1.89
LSM3P4-201ENST00000502948 TCL1BO95988 128 aa3.24□□□□□ -1.89
LSM3P4-201ENST00000502948 IFITM1P13164 125 aa3.24□□□□□ -1.89
LSM3P4-201ENST00000502948 FABP4P15090 132 aa3.24□□□□□ -1.89
LSM3P4-201ENST00000502948 NPC2P61916 151 aa3.24□□□□□ -1.89
LSM3P4-201ENST00000502948 PET117Q6UWS5 81 aa3.24□□□□□ -1.89
LSM3P4-201ENST00000502948 OR13C6PQ8NH95 151 aa3.24□□□□□ -1.89
LSM3P4-201ENST00000502948 PMCHL2Q9BQD1 86 aa3.24□□□□□ -1.89
LSM3P4-201ENST00000502948 NHP2Q9NX24 153 aaKnown RBP3.24□□□□□ -1.89
LSM3P4-201ENST00000502948 HRCT1Q6UXD1 115 aa3.23□□□□□ -1.89
LSM3P4-201ENST00000502948 ZNF815PA8K554 130 aa3.22□□□□□ -1.89
LSM3P4-201ENST00000502948 COLCA2A8K830 154 aa3.22□□□□□ -1.89
LSM3P4-201ENST00000502948 Q1RN00 199 aa3.22□□□□□ -1.89
LSM3P4-201ENST00000502948 M0R2T5 61 aa3.21□□□□□ -1.9
LSM3P4-201ENST00000502948 Q6JHZ5 121 aa3.21□□□□□ -1.9
LSM3P4-201ENST00000502948 COX6B2Q6YFQ2 88 aa3.21□□□□□ -1.9
LSM3P4-201ENST00000502948 TRAV13-2A0A0B4J235 113 aa3.2□□□□□ -1.9
LSM3P4-201ENST00000502948 Q75L30 129 aa3.2□□□□□ -1.9
LSM3P4-201ENST00000502948 DEFB105AQ8NG35 78 aa3.2□□□□□ -1.9
LSM3P4-201ENST00000502948 HIST1H2BKO60814 126 aa3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 HIST1H2BJP06899 126 aa3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 CFC1P0CG37 223 aa3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 HIST1H2BOP23527 126 aa3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 HIST1H2BBP33778 126 aa3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 HIST1H2BDP58876 126 aa3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 HIST1H2BCP62807 126 aa3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 HIST2H2BEQ16778 126 aa3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 COA6Q5JTJ3 125 aaKnown RBP3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 SCGB1D4Q6XE38 83 aa3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 PPDPFLQ8WWR9 84 aa3.19□□□□□ -1.9
LSM3P4-201ENST00000502948 HIST1H2BHQ93079 126 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms