RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 RPS10P5Q9NQ39 176 aa5.94□□□□□ -1.46
SND1-215ENST00000492772 TMEM238LA0A1B0GVL6 79 aa5.93□□□□□ -1.46
SND1-215ENST00000492772 SLC25A34Q6PIV7 304 aa5.93□□□□□ -1.46
SND1-215ENST00000492772 COX6B2Q6YFQ2 88 aa5.93□□□□□ -1.46
SND1-215ENST00000492772 IFI27L1Q96BM0 104 aa5.93□□□□□ -1.46
SND1-215ENST00000492772 FLGP20930 4061 aaPredicted RBP5.93□□□□□ -1.46
SND1-215ENST00000492772 ZNF73O43830 326 aaPredicted RBP5.92□□□□□ -1.46
SND1-215ENST00000492772 NDUFC2O95298 119 aa5.92□□□□□ -1.46
SND1-215ENST00000492772 ST20-AS1Q8NBB2 130 aa5.92□□□□□ -1.46
SND1-215ENST00000492772 SPRR1BP22528 89 aa5.9□□□□□ -1.46
SND1-215ENST00000492772 HINT1P49773 126 aaPredicted RBP5.9□□□□□ -1.46
SND1-215ENST00000492772 TSPEAR-AS2P59090 65 aa5.9□□□□□ -1.46
SND1-215ENST00000492772 HRCT1Q6UXD1 115 aa5.9□□□□□ -1.46
SND1-215ENST00000492772 CHCHD1Q96BP2 118 aaKnown RBP5.9□□□□□ -1.46
SND1-215ENST00000492772 CBY1Q9Y3M2 126 aa5.9□□□□□ -1.46
SND1-215ENST00000492772 LEPROTO15243 131 aa5.89□□□□□ -1.47
SND1-215ENST00000492772 SNAPINO95295 136 aa5.89□□□□□ -1.47
SND1-215ENST00000492772 SVBPQ8N300 66 aa5.89□□□□□ -1.47
SND1-215ENST00000492772 APOC3P02656 99 aa5.88□□□□□ -1.47
SND1-215ENST00000492772 NMUP48645 174 aa5.88□□□□□ -1.47
SND1-215ENST00000492772 CD164Q04900 197 aa5.88□□□□□ -1.47
SND1-215ENST00000492772 C21orf62-AS1Q17RA5 79 aa5.88□□□□□ -1.47
SND1-215ENST00000492772 LAMTOR3Q9UHA4 124 aa5.88□□□□□ -1.47
SND1-215ENST00000492772 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
SND1-215ENST00000492772 RPL37P61927 97 aaKnown RBP5.87□□□□□ -1.47
SND1-215ENST00000492772 DHRS4-AS1Q9P1J3 65 aa5.87□□□□□ -1.47
SND1-215ENST00000492772 J3QQQ9 107 aa5.86□□□□□ -1.47
SND1-215ENST00000492772 NDUFA5Q16718 116 aa5.86□□□□□ -1.47
SND1-215ENST00000492772 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.85□□□□□ -1.47
SND1-215ENST00000492772 H0Y8G0 127 aa5.85□□□□□ -1.47
SND1-215ENST00000492772 PLNP26678 52 aa5.85□□□□□ -1.47
SND1-215ENST00000492772 HERVK_113P61574 105 aa5.85□□□□□ -1.47
SND1-215ENST00000492772 Q5XG85 94 aa5.85□□□□□ -1.47
SND1-215ENST00000492772 H7C2G1 150 aa5.84□□□□□ -1.47
SND1-215ENST00000492772 HSBP1O75506 76 aa5.84□□□□□ -1.47
SND1-215ENST00000492772 LGALS3P17931 250 aaKnown RBP5.84□□□□□ -1.47
SND1-215ENST00000492772 PRO1933Q9H354 126 aa5.84□□□□□ -1.47
SND1-215ENST00000492772 NPC2P61916 151 aa5.83□□□□□ -1.48
SND1-215ENST00000492772 SOSTDC1Q6X4U4 206 aa5.83□□□□□ -1.48
SND1-215ENST00000492772 LINC00310P59036 64 aa5.82□□□□□ -1.48
SND1-215ENST00000492772 C1orf195Q5TG92 126 aa5.82□□□□□ -1.48
SND1-215ENST00000492772 EIF4EBP3O60516 100 aaPredicted RBP5.81□□□□□ -1.48
SND1-215ENST00000492772 DPM2O94777 84 aa5.81□□□□□ -1.48
SND1-215ENST00000492772 Q1RN00 199 aa5.81□□□□□ -1.48
SND1-215ENST00000492772 SPANXCQ9NY87 97 aa5.81□□□□□ -1.48
SND1-215ENST00000492772 A0A0J9YXY3 114 aa5.8□□□□□ -1.48
SND1-215ENST00000492772 LEPROTL1O95214 131 aa5.8□□□□□ -1.48
SND1-215ENST00000492772 ELOF1P60002 83 aaKnown RBP5.8□□□□□ -1.48
SND1-215ENST00000492772 TAL2Q16559 108 aa5.8□□□□□ -1.48
SND1-215ENST00000492772 ADAMTSL4-AS1Q5T5F5 129 aa5.8□□□□□ -1.48
SND1-215ENST00000492772 OR13C6PQ8NH95 151 aa5.8□□□□□ -1.48
SND1-215ENST00000492772 TEX49A0A1B0GTD5 131 aa5.79□□□□□ -1.48
SND1-215ENST00000492772 COX7BP24311 80 aa5.79□□□□□ -1.48
SND1-215ENST00000492772 AKR1D1P51857 326 aa5.79□□□□□ -1.48
SND1-215ENST00000492772 SMIM29Q86T20 159 aa5.79□□□□□ -1.48
SND1-215ENST00000492772 SPANXDQ9BXN6 97 aa5.79□□□□□ -1.48
SND1-215ENST00000492772 IGKCP01834 107 aa5.78□□□□□ -1.48
SND1-215ENST00000492772 CFC1P0CG37 223 aa5.78□□□□□ -1.48
SND1-215ENST00000492772 DEFB105AQ8NG35 78 aa5.78□□□□□ -1.48
SND1-215ENST00000492772 SSPOA2VEC9 5147 aa5.77□□□□□ -1.49
SND1-215ENST00000492772 TRGC2P03986 189 aa5.77□□□□□ -1.49
SND1-215ENST00000492772 LINC00308Q8TCZ7 52 aa5.77□□□□□ -1.49
SND1-215ENST00000492772 C6orf99Q4VX62 202 aa5.76□□□□□ -1.49
SND1-215ENST00000492772 PMCHL2Q9BQD1 86 aa5.76□□□□□ -1.49
SND1-215ENST00000492772 HSPB8Q9UJY1 196 aa5.76□□□□□ -1.49
SND1-215ENST00000492772 USH2AO75445 5202 aa5.76□□□□□ -1.49
SND1-215ENST00000492772 E9PLD3 99 aa5.75□□□□□ -1.49
SND1-215ENST00000492772 SERF1AO75920 110 aa5.75□□□□□ -1.49
SND1-215ENST00000492772 TCL1BO95988 128 aa5.75□□□□□ -1.49
SND1-215ENST00000492772 Q6Q795 121 aa5.75□□□□□ -1.49
SND1-215ENST00000492772 TRBV7-6A0A0J9YX20 115 aa5.74□□□□□ -1.49
SND1-215ENST00000492772 COLCA2A8K830 154 aa5.74□□□□□ -1.49
SND1-215ENST00000492772 TIMM17BO60830 172 aa5.74□□□□□ -1.49
SND1-215ENST00000492772 LITAFQ99732 161 aa5.74□□□□□ -1.49
SND1-215ENST00000492772 IGLV5-48A0A075B6I7 105 aa5.73□□□□□ -1.49
SND1-215ENST00000492772 LINC00518Q8N0U6 118 aa5.73□□□□□ -1.49
SND1-215ENST00000492772 A0A1B0GWB2 263 aa5.72□□□□□ -1.49
SND1-215ENST00000492772 FABP4P15090 132 aa5.72□□□□□ -1.49
SND1-215ENST00000492772 ATP11AUNQ6ZP68 121 aa5.72□□□□□ -1.49
SND1-215ENST00000492772 A0A0G2JQZ4 141 aa5.71□□□□□ -1.5
SND1-215ENST00000492772 Q75L30 129 aa5.7□□□□□ -1.5
SND1-215ENST00000492772 SLC7A5P1Q8MH63 180 aa5.69□□□□□ -1.5
SND1-215ENST00000492772 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
SND1-215ENST00000492772 PCP2Q8IVA1 136 aa5.68□□□□□ -1.5
SND1-215ENST00000492772 NHP2Q9NX24 153 aaKnown RBP5.68□□□□□ -1.5
SND1-215ENST00000492772 FCGBPQ9Y6R7 5405 aaPredicted RBP5.67□□□□□ -1.5
SND1-215ENST00000492772 A4D1N5 150 aa5.67□□□□□ -1.5
SND1-215ENST00000492772 ZNF815PA8K554 130 aa5.67□□□□□ -1.5
SND1-215ENST00000492772 F8WEM9 126 aa5.67□□□□□ -1.5
SND1-215ENST00000492772 C20orf202A1L168 122 aa5.66□□□□□ -1.5
SND1-215ENST00000492772 HIST1H2BKO60814 126 aa5.66□□□□□ -1.5
SND1-215ENST00000492772 HIST1H2BJP06899 126 aa5.66□□□□□ -1.5
SND1-215ENST00000492772 HIST1H2BOP23527 126 aa5.66□□□□□ -1.5
SND1-215ENST00000492772 HIST1H2BBP33778 126 aa5.66□□□□□ -1.5
SND1-215ENST00000492772 HIST1H2BDP58876 126 aa5.66□□□□□ -1.5
SND1-215ENST00000492772 HIST1H2BCP62807 126 aa5.66□□□□□ -1.5
SND1-215ENST00000492772 HIST2H2BEQ16778 126 aa5.66□□□□□ -1.5
SND1-215ENST00000492772 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.66□□□□□ -1.5
SND1-215ENST00000492772 COPS9Q8WXC6 57 aa5.66□□□□□ -1.5
SND1-215ENST00000492772 HIST1H2BHQ93079 126 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms