RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 TMEM126AQ9H061 195 aa3.45□□□□□ -1.86
CDHR3-213ENST00000488386 TRAV12-1A0A0B4J245 112 aa3.44□□□□□ -1.86
CDHR3-213ENST00000488386 SERF1AO75920 110 aa3.44□□□□□ -1.86
CDHR3-213ENST00000488386 FABP4P15090 132 aa3.44□□□□□ -1.86
CDHR3-213ENST00000488386 RPL13AP40429 203 aaKnown RBP3.44□□□□□ -1.86
CDHR3-213ENST00000488386 MEIG1Q5JSS6 88 aa3.44□□□□□ -1.86
CDHR3-213ENST00000488386 C3orf22Q8N5N4 141 aa3.44□□□□□ -1.86
CDHR3-213ENST00000488386 DAND5Q8N907 189 aa3.44□□□□□ -1.86
CDHR3-213ENST00000488386 HIGD2AQ9BW72 106 aa3.44□□□□□ -1.86
CDHR3-213ENST00000488386 COLCA2A8K830 154 aa3.43□□□□□ -1.86
CDHR3-213ENST00000488386 CRYGAP11844 174 aa3.43□□□□□ -1.86
CDHR3-213ENST00000488386 MIR7-3HGQ8N6C7 128 aa3.43□□□□□ -1.86
CDHR3-213ENST00000488386 LEPROTL1O95214 131 aa3.42□□□□□ -1.86
CDHR3-213ENST00000488386 KRTAP10-5P60370 271 aa3.42□□□□□ -1.86
CDHR3-213ENST00000488386 NPC2P61916 151 aa3.42□□□□□ -1.86
CDHR3-213ENST00000488386 COX17Q14061 63 aa3.42□□□□□ -1.86
CDHR3-213ENST00000488386 BOD1L2Q8IYS8 172 aa3.42□□□□□ -1.86
CDHR3-213ENST00000488386 NDUFA12Q9UI09 145 aa3.42□□□□□ -1.86
CDHR3-213ENST00000488386 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
CDHR3-213ENST00000488386 ATP6V1G1O75348 118 aa3.41□□□□□ -1.86
CDHR3-213ENST00000488386 COA6Q5JTJ3 125 aaKnown RBP3.41□□□□□ -1.86
CDHR3-213ENST00000488386 SFTA2Q6UW10 78 aa3.41□□□□□ -1.86
CDHR3-213ENST00000488386 LINC00304Q8N9R0 145 aa3.41□□□□□ -1.86
CDHR3-213ENST00000488386 PLEKHB2Q96CS7 222 aa3.41□□□□□ -1.86
CDHR3-213ENST00000488386 PPDPFQ9H3Y8 114 aa3.41□□□□□ -1.86
CDHR3-213ENST00000488386 MUC17Q685J3 4493 aa3.4□□□□□ -1.86
CDHR3-213ENST00000488386 IGKV2D-26A0A0A0MRZ7 120 aa3.4□□□□□ -1.87
CDHR3-213ENST00000488386 TRBV10-3A0A0K0K1G6 114 aa3.4□□□□□ -1.87
CDHR3-213ENST00000488386 LEPROTO15243 131 aa3.4□□□□□ -1.87
CDHR3-213ENST00000488386 MUC2Q02817 5179 aa3.39□□□□□ -1.87
CDHR3-213ENST00000488386 MYMXA0A1B0GTQ4 84 aa3.39□□□□□ -1.87
CDHR3-213ENST00000488386 J3QQQ9 107 aa3.39□□□□□ -1.87
CDHR3-213ENST00000488386 ERC2-IT1O76042 136 aa3.39□□□□□ -1.87
CDHR3-213ENST00000488386 IGKCP01834 107 aa3.39□□□□□ -1.87
CDHR3-213ENST00000488386 FAM229BQ4G0N7 80 aa3.39□□□□□ -1.87
CDHR3-213ENST00000488386 SMCR5Q8TEV8 140 aa3.39□□□□□ -1.87
CDHR3-213ENST00000488386 SPRR4Q96PI1 79 aa3.39□□□□□ -1.87
CDHR3-213ENST00000488386 IGLV7-46A0A075B6I9 117 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 ETDCA0A1B0GVM5 59 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 HIST1H2BKO60814 126 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 DPM2O94777 84 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 HIST1H2BJP06899 126 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 LGALS3P17931 250 aaKnown RBP3.38□□□□□ -1.87
CDHR3-213ENST00000488386 HIST1H2BOP23527 126 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 HIST1H2BBP33778 126 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 AKR1D1P51857 326 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 HIST1H2BDP58876 126 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 HIST1H2BCP62807 126 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 HERV-K104P63124 156 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 HIST2H2BEQ16778 126 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.38□□□□□ -1.87
CDHR3-213ENST00000488386 SOSTDC1Q6X4U4 206 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 HIST1H2BHQ93079 126 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 HIST1H2BNQ99877 126 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 HIST1H2BMQ99879 126 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 TTTY13Q9BZ97 58 aa3.38□□□□□ -1.87
CDHR3-213ENST00000488386 A0A0J9YXY3 114 aa3.37□□□□□ -1.87
CDHR3-213ENST00000488386 KRTAP4-16G5E9R7 235 aaPredicted RBP3.37□□□□□ -1.87
CDHR3-213ENST00000488386 PLNP26678 52 aa3.37□□□□□ -1.87
CDHR3-213ENST00000488386 DDTP30046 118 aa3.37□□□□□ -1.87
CDHR3-213ENST00000488386 SPRR1AP35321 89 aa3.37□□□□□ -1.87
CDHR3-213ENST00000488386 Q8NBF4 154 aa3.37□□□□□ -1.87
CDHR3-213ENST00000488386 FAM218AQ96MZ4 157 aa3.37□□□□□ -1.87
CDHR3-213ENST00000488386 KCNQ1DNQ9H478 68 aa3.37□□□□□ -1.87
CDHR3-213ENST00000488386 HSPB8Q9UJY1 196 aa3.37□□□□□ -1.87
CDHR3-213ENST00000488386 C5orf52A6NGY3 159 aa3.36□□□□□ -1.87
CDHR3-213ENST00000488386 HERVK_113P61574 105 aa3.36□□□□□ -1.87
CDHR3-213ENST00000488386 LINC00337Q8N6G1 96 aa3.36□□□□□ -1.87
CDHR3-213ENST00000488386 Q9BRP9 147 aa3.36□□□□□ -1.87
CDHR3-213ENST00000488386 MAP1LC3CQ9BXW4 147 aa3.36□□□□□ -1.87
CDHR3-213ENST00000488386 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
CDHR3-213ENST00000488386 E9PLD3 99 aa3.35□□□□□ -1.87
CDHR3-213ENST00000488386 SYS1-DBNDD2H3BUS1 97 aa3.35□□□□□ -1.87
CDHR3-213ENST00000488386 MOBPQ13875 183 aa3.35□□□□□ -1.87
CDHR3-213ENST00000488386 S100A7L2Q5SY68 101 aa3.35□□□□□ -1.87
CDHR3-213ENST00000488386 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
CDHR3-213ENST00000488386 ST20-AS1Q8NBB2 130 aa3.35□□□□□ -1.87
CDHR3-213ENST00000488386 MIEN1Q9BRT3 115 aa3.35□□□□□ -1.87
CDHR3-213ENST00000488386 TRAV23DV6A0A075B6W5 121 aa3.34□□□□□ -1.87
CDHR3-213ENST00000488386 LOC107984156A0A0G2JMH3 177 aa3.34□□□□□ -1.87
CDHR3-213ENST00000488386 A4D1N5 150 aa3.34□□□□□ -1.87
CDHR3-213ENST00000488386 LINC00587B1AMM8 73 aa3.34□□□□□ -1.87
CDHR3-213ENST00000488386 NMUP48645 174 aa3.34□□□□□ -1.87
CDHR3-213ENST00000488386 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
CDHR3-213ENST00000488386 ARL17AQ8IVW1 177 aa3.34□□□□□ -1.87
CDHR3-213ENST00000488386 SPANXB1Q9NS25 103 aaPredicted RBP3.34□□□□□ -1.87
CDHR3-213ENST00000488386 ZNF706Q9Y5V0 76 aaPredicted RBP3.34□□□□□ -1.87
CDHR3-213ENST00000488386 TRBV10-2A0A0K0K1G8 114 aa3.33□□□□□ -1.88
CDHR3-213ENST00000488386 IGLV6-57P01721 117 aa3.33□□□□□ -1.88
CDHR3-213ENST00000488386 C3orf79P0CE67 100 aa3.33□□□□□ -1.88
CDHR3-213ENST00000488386 LINC00483Q53H64 154 aa3.33□□□□□ -1.88
CDHR3-213ENST00000488386 LINC01545Q5VT33 79 aa3.33□□□□□ -1.88
CDHR3-213ENST00000488386 Q6ZRX8 168 aa3.33□□□□□ -1.88
CDHR3-213ENST00000488386 ATOH7Q8N100 152 aa3.33□□□□□ -1.88
CDHR3-213ENST00000488386 ZNF815PA8K554 130 aa3.32□□□□□ -1.88
CDHR3-213ENST00000488386 ZNF73O43830 326 aaPredicted RBP3.32□□□□□ -1.88
CDHR3-213ENST00000488386 NDUFC2O95298 119 aa3.32□□□□□ -1.88
CDHR3-213ENST00000488386 KRTDAPP60985 99 aa3.32□□□□□ -1.88
CDHR3-213ENST00000488386 S100A12P80511 92 aa3.32□□□□□ -1.88
CDHR3-213ENST00000488386 C9orf153Q5TBE3 101 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms