RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 CD164Q04900 197 aa4.19□□□□□ -1.74
VPS13D-209ENST00000487188 C6orf48Q9UBA6 75 aa4.19□□□□□ -1.74
VPS13D-209ENST00000487188 TEX15Q9BXT5 2789 aa4.19□□□□□ -1.74
VPS13D-209ENST00000487188 CELSR1Q9NYQ6 3014 aa4.18□□□□□ -1.74
VPS13D-209ENST00000487188 LYRM9A8MSI8 78 aa4.18□□□□□ -1.74
VPS13D-209ENST00000487188 NDUFB1O75438 58 aa4.18□□□□□ -1.74
VPS13D-209ENST00000487188 Q6ZRU5 148 aa4.18□□□□□ -1.74
VPS13D-209ENST00000487188 KPRPQ5T749 579 aaPredicted RBP4.18□□□□□ -1.74
VPS13D-209ENST00000487188 ANKRD17O75179 2603 aaKnown RBP4.17□□□□□ -1.74
VPS13D-209ENST00000487188 PRR15LQ9BU68 103 aa4.17□□□□□ -1.74
VPS13D-209ENST00000487188 WFDC13Q8IUB5 93 aa4.17□□□□□ -1.74
VPS13D-209ENST00000487188 CSNK1G2-AS1Q8NCQ2 148 aa4.17□□□□□ -1.74
VPS13D-209ENST00000487188 C1orf137Q5JT78 98 aa4.16□□□□□ -1.74
VPS13D-209ENST00000487188 LINC00528Q8N1L1 170 aa4.16□□□□□ -1.74
VPS13D-209ENST00000487188 MAST4O15021 2626 aa4.16□□□□□ -1.74
VPS13D-209ENST00000487188 VPREB1P12018 145 aa4.16□□□□□ -1.74
VPS13D-209ENST00000487188 A6NED7 52 aa4.15□□□□□ -1.74
VPS13D-209ENST00000487188 DNAJC9-AS1A6NH13 148 aa4.15□□□□□ -1.74
VPS13D-209ENST00000487188 IGLV1-51P01701 117 aa4.15□□□□□ -1.74
VPS13D-209ENST00000487188 DEFB135Q30KP9 77 aa4.15□□□□□ -1.74
VPS13D-209ENST00000487188 EGFEM1PQ0D2K5 195 aa4.15□□□□□ -1.74
VPS13D-209ENST00000487188 LELP1Q5T871 98 aa4.15□□□□□ -1.74
VPS13D-209ENST00000487188 LINC00208Q96KT6 92 aa4.15□□□□□ -1.74
VPS13D-209ENST00000487188 B9D2Q9BPU9 175 aa4.15□□□□□ -1.74
VPS13D-209ENST00000487188 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.15□□□□□ -1.75
VPS13D-209ENST00000487188 GVQW2A0A096LPI5 108 aaPredicted RBP4.15□□□□□ -1.75
VPS13D-209ENST00000487188 HCG22E2RYF7 251 aa4.15□□□□□ -1.75
VPS13D-209ENST00000487188 WFDC10BQ8IUB3 73 aa4.15□□□□□ -1.75
VPS13D-209ENST00000487188 PSCAO43653 123 aa4.14□□□□□ -1.75
VPS13D-209ENST00000487188 LINC00612Q8N6U2 182 aa4.14□□□□□ -1.75
VPS13D-209ENST00000487188 K7EQZ3 153 aa4.14□□□□□ -1.75
VPS13D-209ENST00000487188 FSHBP01225 129 aa4.14□□□□□ -1.75
VPS13D-209ENST00000487188 KRTAP10-9P60411 292 aa4.14□□□□□ -1.75
VPS13D-209ENST00000487188 ANK3Q12955 4377 aaKnown RBP4.14□□□□□ -1.75
VPS13D-209ENST00000487188 SYCNQ0VAF6 134 aa4.13□□□□□ -1.75
VPS13D-209ENST00000487188 ST20-AS1Q8NBB2 130 aa4.13□□□□□ -1.75
VPS13D-209ENST00000487188 Q8NBF4 154 aa4.13□□□□□ -1.75
VPS13D-209ENST00000487188 DHRS4-AS1Q9P1J3 65 aa4.13□□□□□ -1.75
VPS13D-209ENST00000487188 DEFB116Q30KQ4 102 aa4.13□□□□□ -1.75
VPS13D-209ENST00000487188 DEFB113Q30KQ7 82 aa4.13□□□□□ -1.75
VPS13D-209ENST00000487188 LIMD2Q9BT23 127 aa4.13□□□□□ -1.75
VPS13D-209ENST00000487188 F8P00451 2351 aa4.13□□□□□ -1.75
VPS13D-209ENST00000487188 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
VPS13D-209ENST00000487188 CYP4F30PQ9H0H9 118 aa4.12□□□□□ -1.75
VPS13D-209ENST00000487188 C19orf73Q9NVV2 129 aa4.12□□□□□ -1.75
VPS13D-209ENST00000487188 IGKV2D-24A0A075B6R9 120 aa4.12□□□□□ -1.75
VPS13D-209ENST00000487188 A0A1B0GW54 56 aa4.12□□□□□ -1.75
VPS13D-209ENST00000487188 Q8N377 158 aa4.12□□□□□ -1.75
VPS13D-209ENST00000487188 X6R8D5 127 aa4.12□□□□□ -1.75
VPS13D-209ENST00000487188 RPL37AP8A6NKH3 93 aa4.12□□□□□ -1.75
VPS13D-209ENST00000487188 A0A1W2PNM2 257 aa4.11□□□□□ -1.75
VPS13D-209ENST00000487188 SPART-AS1P0CW21 52 aa4.11□□□□□ -1.75
VPS13D-209ENST00000487188 ZFHX3Q15911 3703 aa4.11□□□□□ -1.75
VPS13D-209ENST00000487188 APOC4P55056 127 aa4.11□□□□□ -1.75
VPS13D-209ENST00000487188 H0Y9P7 68 aa4.11□□□□□ -1.75
VPS13D-209ENST00000487188 CUBNO60494 3623 aa4.1□□□□□ -1.75
VPS13D-209ENST00000487188 NDUFS5O43920 106 aa4.1□□□□□ -1.75
VPS13D-209ENST00000487188 C7orf33Q8WU49 177 aa4.1□□□□□ -1.75
VPS13D-209ENST00000487188 IGLV5-48A0A075B6I7 105 aa4.1□□□□□ -1.75
VPS13D-209ENST00000487188 Q5VV11 94 aa4.1□□□□□ -1.75
VPS13D-209ENST00000487188 ZCCHC13Q8WW36 166 aaKnown RBP4.1□□□□□ -1.75
VPS13D-209ENST00000487188 DSCR10P59022 87 aa4.09□□□□□ -1.75
VPS13D-209ENST00000487188 RBM12B-AS1Q9P1G2 102 aa4.09□□□□□ -1.75
VPS13D-209ENST00000487188 PRR34Q9NV39 138 aa4.09□□□□□ -1.75
VPS13D-209ENST00000487188 KRTAP1-3Q8IUG1 177 aa4.09□□□□□ -1.76
VPS13D-209ENST00000487188 HIVEP1P15822 2718 aa4.08□□□□□ -1.76
VPS13D-209ENST00000487188 LCE6AA0A183 80 aa4.08□□□□□ -1.76
VPS13D-209ENST00000487188 ACANP16112 2415 aa4.08□□□□□ -1.76
VPS13D-209ENST00000487188 A8MU10 97 aa4.08□□□□□ -1.76
VPS13D-209ENST00000487188 Q6ZRX8 168 aa4.08□□□□□ -1.76
VPS13D-209ENST00000487188 ATP11AUNQ6ZP68 121 aa4.07□□□□□ -1.76
VPS13D-209ENST00000487188 KCNQ1DNQ9H478 68 aa4.07□□□□□ -1.76
VPS13D-209ENST00000487188 LINC00588Q9Y4M8 146 aa4.07□□□□□ -1.76
VPS13D-209ENST00000487188 A0A087WSZ3 146 aa4.07□□□□□ -1.76
VPS13D-209ENST00000487188 C16orf90A8MZG2 172 aa4.07□□□□□ -1.76
VPS13D-209ENST00000487188 CASC2Q6XLA1 102 aa4.07□□□□□ -1.76
VPS13D-209ENST00000487188 ZANQ9Y493 2812 aa4.07□□□□□ -1.76
VPS13D-209ENST00000487188 NBEAL2Q6ZNJ1 2754 aa4.07□□□□□ -1.76
VPS13D-209ENST00000487188 SERTAD4-AS1Q5TG53 156 aa4.06□□□□□ -1.76
VPS13D-209ENST00000487188 Q8N9P0 234 aaPredicted RBP4.06□□□□□ -1.76
VPS13D-209ENST00000487188 LINC00476Q8WZB0 136 aa4.06□□□□□ -1.76
VPS13D-209ENST00000487188 H0Y9J4 135 aa4.05□□□□□ -1.76
VPS13D-209ENST00000487188 H3BPC8 53 aa4.05□□□□□ -1.76
VPS13D-209ENST00000487188 RPL37AP61513 92 aaKnown RBP4.05□□□□□ -1.76
VPS13D-209ENST00000487188 COA5Q86WW8 74 aa4.05□□□□□ -1.76
VPS13D-209ENST00000487188 C15orf56Q8N910 161 aa4.05□□□□□ -1.76
VPS13D-209ENST00000487188 SPANXA2-OT1Q8N9U9 137 aa4.04□□□□□ -1.76
VPS13D-209ENST00000487188 SPRR4Q96PI1 79 aa4.04□□□□□ -1.76
VPS13D-209ENST00000487188 A0A0G2JQZ4 141 aa4.04□□□□□ -1.76
VPS13D-209ENST00000487188 A0A1W2PNN7 141 aa4.04□□□□□ -1.76
VPS13D-209ENST00000487188 PCOTHQ58A44 107 aa4.04□□□□□ -1.76
VPS13D-209ENST00000487188 ITPR3Q14573 2671 aa4.04□□□□□ -1.76
VPS13D-209ENST00000487188 NF1P21359 2839 aa4.04□□□□□ -1.76
VPS13D-209ENST00000487188 C7orf65Q6ZTY9 151 aa4.04□□□□□ -1.76
VPS13D-209ENST00000487188 Q9BRP9 147 aa4.04□□□□□ -1.76
VPS13D-209ENST00000487188 LOC101927531A0A1B0GV80 90 aa4.03□□□□□ -1.76
VPS13D-209ENST00000487188 Q75L30 129 aa4.03□□□□□ -1.76
VPS13D-209ENST00000487188 SPAG11AQ6PDA7 123 aa4.03□□□□□ -1.76
VPS13D-209ENST00000487188 FAM168BA1KXE4 195 aa4.02□□□□□ -1.77
VPS13D-209ENST00000487188 INAFM1C9JVW0 142 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms