RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 C2orf91Q6ZV80 131 aa7.16□□□□□ -1.26
APTX-227ENST00000485479 HIGD2AQ9BW72 106 aa7.16□□□□□ -1.26
APTX-227ENST00000485479 ANAPC11Q9NYG5 84 aa7.16□□□□□ -1.26
APTX-227ENST00000485479 PRYO14603 147 aa7.15□□□□□ -1.26
APTX-227ENST00000485479 RPL28P46779 137 aaKnown RBP7.15□□□□□ -1.26
APTX-227ENST00000485479 LCE2CQ5TA81 110 aa7.15□□□□□ -1.26
APTX-227ENST00000485479 DIRC1Q969H9 104 aa7.15□□□□□ -1.26
APTX-227ENST00000485479 HIST1H4GQ99525 98 aa7.15□□□□□ -1.26
APTX-227ENST00000485479 TRAV23DV6A0A075B6W5 121 aa7.15□□□□□ -1.27
APTX-227ENST00000485479 IFITM1P13164 125 aa7.15□□□□□ -1.27
APTX-227ENST00000485479 DMBT1Q9UGM3 2413 aaPredicted RBP7.14□□□□□ -1.27
APTX-227ENST00000485479 A4D1N5 150 aa7.14□□□□□ -1.27
APTX-227ENST00000485479 KRTAP29-1A8MX34 341 aaPredicted RBP7.14□□□□□ -1.27
APTX-227ENST00000485479 KRTAP4-16G5E9R7 235 aaPredicted RBP7.14□□□□□ -1.27
APTX-227ENST00000485479 TNXBP22105 4242 aa7.14□□□□□ -1.27
APTX-227ENST00000485479 ETDCA0A1B0GVM5 59 aa7.13□□□□□ -1.27
APTX-227ENST00000485479 A6NDN8 102 aa7.13□□□□□ -1.27
APTX-227ENST00000485479 DLEU1O43261 78 aa7.13□□□□□ -1.27
APTX-227ENST00000485479 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
APTX-227ENST00000485479 SPRR1AP35321 89 aa7.13□□□□□ -1.27
APTX-227ENST00000485479 Q6ZVH6 145 aa7.13□□□□□ -1.27
APTX-227ENST00000485479 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
APTX-227ENST00000485479 CTAG1AP78358 180 aa7.13□□□□□ -1.27
APTX-227ENST00000485479 C21orf62-AS1Q17RA5 79 aa7.13□□□□□ -1.27
APTX-227ENST00000485479 ZNF73O43830 326 aaPredicted RBP7.12□□□□□ -1.27
APTX-227ENST00000485479 PRR26Q8N8Z3 221 aa7.12□□□□□ -1.27
APTX-227ENST00000485479 LOC105371267A0A1B0GV96 52 aa7.11□□□□□ -1.27
APTX-227ENST00000485479 LINC01600Q96MT4 127 aa7.11□□□□□ -1.27
APTX-227ENST00000485479 PRO1933Q9H354 126 aa7.11□□□□□ -1.27
APTX-227ENST00000485479 B5MCH6 92 aa7.11□□□□□ -1.27
APTX-227ENST00000485479 ERC2-IT1O76042 136 aa7.11□□□□□ -1.27
APTX-227ENST00000485479 S100A12P80511 92 aa7.11□□□□□ -1.27
APTX-227ENST00000485479 Q9BRP9 147 aa7.11□□□□□ -1.27
APTX-227ENST00000485479 OXTP01178 125 aa7.1□□□□□ -1.27
APTX-227ENST00000485479 LINC00518Q8N0U6 118 aa7.1□□□□□ -1.27
APTX-227ENST00000485479 SMCR5Q8TEV8 140 aa7.1□□□□□ -1.27
APTX-227ENST00000485479 COPS9Q8WXC6 57 aa7.1□□□□□ -1.27
APTX-227ENST00000485479 C6orf99Q4VX62 202 aa7.09□□□□□ -1.27
APTX-227ENST00000485479 A0A087X002 238 aa7.09□□□□□ -1.27
APTX-227ENST00000485479 Q6ZRX8 168 aa7.09□□□□□ -1.27
APTX-227ENST00000485479 HIGD1BQ9P298 99 aa7.08□□□□□ -1.28
APTX-227ENST00000485479 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
APTX-227ENST00000485479 H7C2G1 150 aa7.07□□□□□ -1.28
APTX-227ENST00000485479 FXYD2P54710 66 aa7.07□□□□□ -1.28
APTX-227ENST00000485479 RPL13AP40429 203 aaKnown RBP7.06□□□□□ -1.28
APTX-227ENST00000485479 SMIM11BQ8TCY0 68 aa7.06□□□□□ -1.28
APTX-227ENST00000485479 TRAV13-2A0A0B4J235 113 aa7.06□□□□□ -1.28
APTX-227ENST00000485479 SMIM6P0DI80 62 aa7.06□□□□□ -1.28
APTX-227ENST00000485479 CEND1Q8N111 149 aa7.06□□□□□ -1.28
APTX-227ENST00000485479 UQCR10Q9UDW1 63 aa7.06□□□□□ -1.28
APTX-227ENST00000485479 CFC1BP0CG36 223 aa7.05□□□□□ -1.28
APTX-227ENST00000485479 CFC1P0CG37 223 aa7.05□□□□□ -1.28
APTX-227ENST00000485479 ST20-AS1Q8NBB2 130 aa7.05□□□□□ -1.28
APTX-227ENST00000485479 KRTAP10-8P60410 259 aa7.04□□□□□ -1.28
APTX-227ENST00000485479 GAGE2AQ6NT46 116 aa7.04□□□□□ -1.28
APTX-227ENST00000485479 SPRR4Q96PI1 79 aa7.04□□□□□ -1.28
APTX-227ENST00000485479 COX7BP24311 80 aa7.03□□□□□ -1.28
APTX-227ENST00000485479 HINT1P49773 126 aaPredicted RBP7.03□□□□□ -1.28
APTX-227ENST00000485479 ELOF1P60002 83 aaKnown RBP7.03□□□□□ -1.28
APTX-227ENST00000485479 KRTAP13-2Q52LG2 175 aa7.03□□□□□ -1.28
APTX-227ENST00000485479 K7ERJ3 54 aa7.02□□□□□ -1.29
APTX-227ENST00000485479 C3orf22Q8N5N4 141 aa7.02□□□□□ -1.29
APTX-227ENST00000485479 RAB37Q96AX2 223 aa7.02□□□□□ -1.29
APTX-227ENST00000485479 HSD52Q0P140 79 aa7.01□□□□□ -1.29
APTX-227ENST00000485479 NHP2Q9NX24 153 aaKnown RBP7.01□□□□□ -1.29
APTX-227ENST00000485479 CRYGAP11844 174 aa7□□□□□ -1.29
APTX-227ENST00000485479 TAL2Q16559 108 aa7□□□□□ -1.29
APTX-227ENST00000485479 CBY1Q9Y3M2 126 aa7□□□□□ -1.29
APTX-227ENST00000485479 DEFB105AQ8NG35 78 aa6.99□□□□□ -1.29
APTX-227ENST00000485479 TYMSOSQ8TAI1 123 aa6.99□□□□□ -1.29
APTX-227ENST00000485479 IGLV9-49A0A0B4J1Y8 123 aa6.98□□□□□ -1.29
APTX-227ENST00000485479 A0A0B4J2C4 111 aa6.98□□□□□ -1.29
APTX-227ENST00000485479 Q1RN00 199 aa6.98□□□□□ -1.29
APTX-227ENST00000485479 A0A1B0GWB2 263 aa6.97□□□□□ -1.29
APTX-227ENST00000485479 ZNF706Q9Y5V0 76 aaPredicted RBP6.97□□□□□ -1.29
APTX-227ENST00000485479 DHRS4-AS1Q9P1J3 65 aa6.97□□□□□ -1.29
APTX-227ENST00000485479 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.3
APTX-227ENST00000485479 BVES-AS1Q5T3Y7 98 aa6.96□□□□□ -1.3
APTX-227ENST00000485479 PRO1854Q9UHT4 67 aa6.96□□□□□ -1.3
APTX-227ENST00000485479 TSPAN13O95857 204 aa6.95□□□□□ -1.3
APTX-227ENST00000485479 TRBV7-6A0A0J9YX20 115 aa6.95□□□□□ -1.3
APTX-227ENST00000485479 FAM229BQ4G0N7 80 aa6.95□□□□□ -1.3
APTX-227ENST00000485479 LINC00483Q53H64 154 aa6.95□□□□□ -1.3
APTX-227ENST00000485479 HMCN2Q8NDA2 5059 aa6.94□□□□□ -1.3
APTX-227ENST00000485479 MOBPQ13875 183 aa6.94□□□□□ -1.3
APTX-227ENST00000485479 TSTD3H0UI37 97 aa6.93□□□□□ -1.3
APTX-227ENST00000485479 LINC00575Q6W349 94 aa6.93□□□□□ -1.3
APTX-227ENST00000485479 FAM218AQ96MZ4 157 aa6.93□□□□□ -1.3
APTX-227ENST00000485479 TRIAP1O43715 76 aa6.93□□□□□ -1.3
APTX-227ENST00000485479 VAMP3Q15836 100 aa6.93□□□□□ -1.3
APTX-227ENST00000485479 LINC01547P58512 204 aaPredicted RBP6.92□□□□□ -1.3
APTX-227ENST00000485479 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
APTX-227ENST00000485479 Q6ZQY7 126 aa6.91□□□□□ -1.3
APTX-227ENST00000485479 Q8NBF4 154 aa6.91□□□□□ -1.3
APTX-227ENST00000485479 hADV29S1A0JD25 119 aa6.91□□□□□ -1.3
APTX-227ENST00000485479 BATFQ16520 125 aa6.91□□□□□ -1.3
APTX-227ENST00000485479 SLC25A20O43772 301 aa6.9□□□□□ -1.3
APTX-227ENST00000485479 CLEC2BQ92478 149 aa6.9□□□□□ -1.3
APTX-227ENST00000485479 NAA38Q9BRA0 125 aaKnown RBP6.9□□□□□ -1.3
APTX-227ENST00000485479 A0A0G2JQZ4 141 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms