RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 S100A12P80511 92 aa9.58□□□□□ -0.88
COPS3-207ENST00000477299 C12orf57Q99622 126 aa9.58□□□□□ -0.88
COPS3-207ENST00000477299 H0Y9J4 135 aa9.57□□□□□ -0.88
COPS3-207ENST00000477299 LINC00518Q8N0U6 118 aa9.57□□□□□ -0.88
COPS3-207ENST00000477299 TRAV23DV6A0A075B6W5 121 aa9.56□□□□□ -0.88
COPS3-207ENST00000477299 COPS9Q8WXC6 57 aa9.56□□□□□ -0.88
COPS3-207ENST00000477299 A6NDN8 102 aa9.55□□□□□ -0.88
COPS3-207ENST00000477299 SMIM6P0DI80 62 aa9.55□□□□□ -0.88
COPS3-207ENST00000477299 RPL28P46779 137 aaKnown RBP9.55□□□□□ -0.88
COPS3-207ENST00000477299 DIRC1Q969H9 104 aa9.55□□□□□ -0.88
COPS3-207ENST00000477299 B5MCH6 92 aa9.54□□□□□ -0.88
COPS3-207ENST00000477299 UQCR10Q9UDW1 63 aa9.54□□□□□ -0.88
COPS3-207ENST00000477299 ETDCA0A1B0GVM5 59 aa9.53□□□□□ -0.88
COPS3-207ENST00000477299 ZNF73O43830 326 aaPredicted RBP9.53□□□□□ -0.88
COPS3-207ENST00000477299 KRTAP1-4P0C5Y4 121 aa9.53□□□□□ -0.88
COPS3-207ENST00000477299 HIGD2AQ9BW72 106 aa9.53□□□□□ -0.88
COPS3-207ENST00000477299 KRTAP29-1A8MX34 341 aaPredicted RBP9.52□□□□□ -0.89
COPS3-207ENST00000477299 Q9BRP9 147 aa9.52□□□□□ -0.89
COPS3-207ENST00000477299 ANAPC11Q9NYG5 84 aa9.52□□□□□ -0.89
COPS3-207ENST00000477299 ERC2-IT1O76042 136 aa9.51□□□□□ -0.89
COPS3-207ENST00000477299 MT1HL1P0DM35 61 aa9.51□□□□□ -0.89
COPS3-207ENST00000477299 FXYD2P54710 66 aa9.51□□□□□ -0.89
COPS3-207ENST00000477299 CEND1Q8N111 149 aa9.51□□□□□ -0.89
COPS3-207ENST00000477299 SMCR5Q8TEV8 140 aa9.51□□□□□ -0.89
COPS3-207ENST00000477299 CFC1BP0CG36 223 aa9.5□□□□□ -0.89
COPS3-207ENST00000477299 CFC1P0CG37 223 aa9.5□□□□□ -0.89
COPS3-207ENST00000477299 TNXBP22105 4242 aa9.49□□□□□ -0.89
COPS3-207ENST00000477299 TAL2Q16559 108 aa9.49□□□□□ -0.89
COPS3-207ENST00000477299 C6orf99Q4VX62 202 aa9.49□□□□□ -0.89
COPS3-207ENST00000477299 SMIM11BQ8TCY0 68 aa9.49□□□□□ -0.89
COPS3-207ENST00000477299 LINC01600Q96MT4 127 aa9.49□□□□□ -0.89
COPS3-207ENST00000477299 DMBT1Q9UGM3 2413 aaPredicted RBP9.48□□□□□ -0.89
COPS3-207ENST00000477299 TRAV13-2A0A0B4J235 113 aa9.48□□□□□ -0.89
COPS3-207ENST00000477299 OXTP01178 125 aa9.48□□□□□ -0.89
COPS3-207ENST00000477299 Q6ZRX8 168 aa9.48□□□□□ -0.89
COPS3-207ENST00000477299 PRR26Q8N8Z3 221 aa9.48□□□□□ -0.89
COPS3-207ENST00000477299 RPL13AP40429 203 aaKnown RBP9.47□□□□□ -0.89
COPS3-207ENST00000477299 HSD52Q0P140 79 aa9.46□□□□□ -0.9
COPS3-207ENST00000477299 H7C2G1 150 aa9.45□□□□□ -0.9
COPS3-207ENST00000477299 KRTAP10-8P60410 259 aa9.45□□□□□ -0.9
COPS3-207ENST00000477299 A0A087X002 238 aa9.44□□□□□ -0.9
COPS3-207ENST00000477299 J3QL48 77 aa9.44□□□□□ -0.9
COPS3-207ENST00000477299 COX7BP24311 80 aa9.44□□□□□ -0.9
COPS3-207ENST00000477299 ELOF1P60002 83 aaKnown RBP9.43□□□□□ -0.9
COPS3-207ENST00000477299 ST20-AS1Q8NBB2 130 aa9.43□□□□□ -0.9
COPS3-207ENST00000477299 K7ERJ3 54 aa9.42□□□□□ -0.9
COPS3-207ENST00000477299 CTAG1AP78358 180 aa9.42□□□□□ -0.9
COPS3-207ENST00000477299 RAB37Q96AX2 223 aa9.42□□□□□ -0.9
COPS3-207ENST00000477299 SPRR4Q96PI1 79 aa9.42□□□□□ -0.9
COPS3-207ENST00000477299 A0A0B4J2C4 111 aa9.41□□□□□ -0.9
COPS3-207ENST00000477299 NHP2Q9NX24 153 aaKnown RBP9.41□□□□□ -0.9
COPS3-207ENST00000477299 CBY1Q9Y3M2 126 aa9.41□□□□□ -0.9
COPS3-207ENST00000477299 HINT1P49773 126 aaPredicted RBP9.4□□□□□ -0.9
COPS3-207ENST00000477299 KRTAP13-2Q52LG2 175 aa9.4□□□□□ -0.9
COPS3-207ENST00000477299 BVES-AS1Q5T3Y7 98 aa9.4□□□□□ -0.9
COPS3-207ENST00000477299 TRBV7-6A0A0J9YX20 115 aa9.38□□□□□ -0.91
COPS3-207ENST00000477299 GAGE2AQ6NT46 116 aa9.38□□□□□ -0.91
COPS3-207ENST00000477299 PRO1854Q9UHT4 67 aa9.38□□□□□ -0.91
COPS3-207ENST00000477299 TMEM238LA0A1B0GVL6 79 aa9.37□□□□□ -0.91
COPS3-207ENST00000477299 A0A1B0GWB2 263 aa9.37□□□□□ -0.91
COPS3-207ENST00000477299 A6NJY4 79 aa9.37□□□□□ -0.91
COPS3-207ENST00000477299 C3orf22Q8N5N4 141 aa9.36□□□□□ -0.91
COPS3-207ENST00000477299 TSTD3H0UI37 97 aa9.35□□□□□ -0.91
COPS3-207ENST00000477299 DHRS4-AS1Q9P1J3 65 aa9.35□□□□□ -0.91
COPS3-207ENST00000477299 CRYGAP11844 174 aa9.34□□□□□ -0.91
COPS3-207ENST00000477299 Q1RN00 199 aa9.33□□□□□ -0.92
COPS3-207ENST00000477299 FAM229BQ4G0N7 80 aa9.33□□□□□ -0.92
COPS3-207ENST00000477299 LINC00575Q6W349 94 aa9.33□□□□□ -0.92
COPS3-207ENST00000477299 LINC00483Q53H64 154 aa9.32□□□□□ -0.92
COPS3-207ENST00000477299 DEFB105AQ8NG35 78 aa9.32□□□□□ -0.92
COPS3-207ENST00000477299 ZNF706Q9Y5V0 76 aaPredicted RBP9.32□□□□□ -0.92
COPS3-207ENST00000477299 VAMP3Q15836 100 aa9.31□□□□□ -0.92
COPS3-207ENST00000477299 FAM218AQ96MZ4 157 aa9.31□□□□□ -0.92
COPS3-207ENST00000477299 TRIAP1O43715 76 aa9.3□□□□□ -0.92
COPS3-207ENST00000477299 TSPAN13O95857 204 aa9.3□□□□□ -0.92
COPS3-207ENST00000477299 LINC01547P58512 204 aaPredicted RBP9.3□□□□□ -0.92
COPS3-207ENST00000477299 TYMSOSQ8TAI1 123 aa9.3□□□□□ -0.92
COPS3-207ENST00000477299 IGLV9-49A0A0B4J1Y8 123 aa9.27□□□□□ -0.93
COPS3-207ENST00000477299 hADV29S1A0JD25 119 aa9.27□□□□□ -0.93
COPS3-207ENST00000477299 SPRR1BP22528 89 aa9.27□□□□□ -0.93
COPS3-207ENST00000477299 M0R143 59 aa9.26□□□□□ -0.93
COPS3-207ENST00000477299 BATFQ16520 125 aa9.26□□□□□ -0.93
COPS3-207ENST00000477299 CLEC2BQ92478 149 aa9.26□□□□□ -0.93
COPS3-207ENST00000477299 Q6ZQY7 126 aa9.25□□□□□ -0.93
COPS3-207ENST00000477299 SMIM29Q86T20 159 aa9.25□□□□□ -0.93
COPS3-207ENST00000477299 Q8N377 158 aa9.25□□□□□ -0.93
COPS3-207ENST00000477299 NAA38Q9BRA0 125 aaKnown RBP9.25□□□□□ -0.93
COPS3-207ENST00000477299 IGLV5-48A0A075B6I7 105 aa9.24□□□□□ -0.93
COPS3-207ENST00000477299 SLC25A20O43772 301 aa9.24□□□□□ -0.93
COPS3-207ENST00000477299 PSMB2P49721 201 aa9.24□□□□□ -0.93
COPS3-207ENST00000477299 H0YGX0 51 aa9.23□□□□□ -0.93
COPS3-207ENST00000477299 MOBPQ13875 183 aa9.23□□□□□ -0.93
COPS3-207ENST00000477299 TEX49A0A1B0GTD5 131 aa9.22□□□□□ -0.93
COPS3-207ENST00000477299 Q8NBF4 154 aa9.21□□□□□ -0.94
COPS3-207ENST00000477299 A0A0G2JQZ4 141 aa9.19□□□□□ -0.94
COPS3-207ENST00000477299 C9orf153Q5TBE3 101 aa9.19□□□□□ -0.94
COPS3-207ENST00000477299 LINC00304Q8N9R0 145 aa9.19□□□□□ -0.94
COPS3-207ENST00000477299 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.18□□□□□ -0.94
COPS3-207ENST00000477299 SNHG12Q9BXW3 62 aa9.17□□□□□ -0.94
COPS3-207ENST00000477299 LAMTOR3Q9UHA4 124 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms