RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TRAV13-2A0A0B4J235 113 aa9.32□□□□□ -0.92
COL27A1-203ENST00000468565 Q8IZM0 81 aa9.32□□□□□ -0.92
COL27A1-203ENST00000468565 CLEC2BQ92478 149 aa9.32□□□□□ -0.92
COL27A1-203ENST00000468565 CIRBP-AS1Q8TBR5 109 aa9.31□□□□□ -0.92
COL27A1-203ENST00000468565 H3BT86 120 aa9.31□□□□□ -0.92
COL27A1-203ENST00000468565 COX7A2LO14548 114 aa9.31□□□□□ -0.92
COL27A1-203ENST00000468565 PLA2G1BP04054 148 aaKnown RBP9.31□□□□□ -0.92
COL27A1-203ENST00000468565 CD164L2Q6UWJ8 174 aa9.31□□□□□ -0.92
COL27A1-203ENST00000468565 C15orf56Q8N910 161 aa9.31□□□□□ -0.92
COL27A1-203ENST00000468565 SND1-IT1Q9HBX3 110 aa9.31□□□□□ -0.92
COL27A1-203ENST00000468565 FAM240AA0A1B0GVK7 77 aa9.3□□□□□ -0.92
COL27A1-203ENST00000468565 C2orf82Q6UX34 121 aa9.3□□□□□ -0.92
COL27A1-203ENST00000468565 SRRM2Q9UQ35 2752 aaKnown RBP9.3□□□□□ -0.92
COL27A1-203ENST00000468565 A0A1B0GX51 115 aa9.29□□□□□ -0.92
COL27A1-203ENST00000468565 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
COL27A1-203ENST00000468565 SDIM1Q6ZPB5 146 aa9.29□□□□□ -0.92
COL27A1-203ENST00000468565 SLPIP03973 132 aa9.28□□□□□ -0.92
COL27A1-203ENST00000468565 PFN2P35080 140 aa9.28□□□□□ -0.92
COL27A1-203ENST00000468565 CXCL5P42830 114 aa9.27□□□□□ -0.93
COL27A1-203ENST00000468565 FLG2Q5D862 2391 aaPredicted RBP9.27□□□□□ -0.93
COL27A1-203ENST00000468565 GVQW2A0A096LPI5 108 aaPredicted RBP9.27□□□□□ -0.93
COL27A1-203ENST00000468565 J3KT08 172 aa9.27□□□□□ -0.93
COL27A1-203ENST00000468565 TRBV7-7A0A0K0K1E9 115 aa9.26□□□□□ -0.93
COL27A1-203ENST00000468565 MALP21145 153 aa9.26□□□□□ -0.93
COL27A1-203ENST00000468565 OR13C6PQ8NH95 151 aa9.26□□□□□ -0.93
COL27A1-203ENST00000468565 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.26□□□□□ -0.93
COL27A1-203ENST00000468565 RPL28P46779 137 aaKnown RBP9.25□□□□□ -0.93
COL27A1-203ENST00000468565 RPS28P62857 69 aaKnown RBP9.25□□□□□ -0.93
COL27A1-203ENST00000468565 IGKV2-28A0A075B6P5 120 aa9.25□□□□□ -0.93
COL27A1-203ENST00000468565 IGKV2D-28P01615 120 aa9.25□□□□□ -0.93
COL27A1-203ENST00000468565 HIGD2BQ4VC39 106 aa9.25□□□□□ -0.93
COL27A1-203ENST00000468565 LINC00337Q8N6G1 96 aa9.25□□□□□ -0.93
COL27A1-203ENST00000468565 MYCBP2O75592 4640 aa9.24□□□□□ -0.93
COL27A1-203ENST00000468565 TRACP01848 142 aa9.24□□□□□ -0.93
COL27A1-203ENST00000468565 PANO1I0J062 215 aa9.23□□□□□ -0.93
COL27A1-203ENST00000468565 COX17Q14061 63 aa9.23□□□□□ -0.93
COL27A1-203ENST00000468565 KIAA0087Q14695 138 aa9.23□□□□□ -0.93
COL27A1-203ENST00000468565 ACYP1P07311 99 aa9.22□□□□□ -0.93
COL27A1-203ENST00000468565 KRTAP10-4P60372 401 aaPredicted RBP9.22□□□□□ -0.93
COL27A1-203ENST00000468565 TEX49A0A1B0GTD5 131 aa9.21□□□□□ -0.93
COL27A1-203ENST00000468565 UQCRQO14949 82 aa9.21□□□□□ -0.93
COL27A1-203ENST00000468565 DMBT1Q9UGM3 2413 aaPredicted RBP9.21□□□□□ -0.94
COL27A1-203ENST00000468565 SMIM11BQ8TCY0 68 aa9.2□□□□□ -0.94
COL27A1-203ENST00000468565 SPACA4Q8TDM5 124 aa9.2□□□□□ -0.94
COL27A1-203ENST00000468565 H0YGX0 51 aa9.19□□□□□ -0.94
COL27A1-203ENST00000468565 C3orf22Q8N5N4 141 aa9.19□□□□□ -0.94
COL27A1-203ENST00000468565 CHTF8P0CG12 524 aa9.19□□□□□ -0.94
COL27A1-203ENST00000468565 PKIGQ9Y2B9 76 aa9.19□□□□□ -0.94
COL27A1-203ENST00000468565 RPL37AP61513 92 aaKnown RBP9.18□□□□□ -0.94
COL27A1-203ENST00000468565 SPAG11BQ08648 103 aa9.18□□□□□ -0.94
COL27A1-203ENST00000468565 C9orf153Q5TBE3 101 aa9.18□□□□□ -0.94
COL27A1-203ENST00000468565 A0A087WYN8 130 aa9.17□□□□□ -0.94
COL27A1-203ENST00000468565 LINC00526Q96FQ7 95 aa9.17□□□□□ -0.94
COL27A1-203ENST00000468565 FAM218AQ96MZ4 157 aa9.17□□□□□ -0.94
COL27A1-203ENST00000468565 NDUFC2O95298 119 aa9.17□□□□□ -0.94
COL27A1-203ENST00000468565 BAALC-AS2P0C853 105 aa9.17□□□□□ -0.94
COL27A1-203ENST00000468565 DPH3Q96FX2 82 aa9.17□□□□□ -0.94
COL27A1-203ENST00000468565 PLAC8Q9NZF1 115 aa9.17□□□□□ -0.94
COL27A1-203ENST00000468565 PKHD1L1Q86WI1 4243 aa9.16□□□□□ -0.94
COL27A1-203ENST00000468565 SYCNQ0VAF6 134 aa9.15□□□□□ -0.94
COL27A1-203ENST00000468565 HERC1Q15751 4861 aa9.15□□□□□ -0.94
COL27A1-203ENST00000468565 DNAL4O96015 105 aa9.15□□□□□ -0.95
COL27A1-203ENST00000468565 KRTAP29-1A8MX34 341 aaPredicted RBP9.13□□□□□ -0.95
COL27A1-203ENST00000468565 C2orf48Q96LS8 159 aa9.13□□□□□ -0.95
COL27A1-203ENST00000468565 LINC00474Q9P2X8 69 aa9.13□□□□□ -0.95
COL27A1-203ENST00000468565 A0A096LNI7 61 aa9.13□□□□□ -0.95
COL27A1-203ENST00000468565 IGKV2-24A0A0C4DH68 120 aa9.13□□□□□ -0.95
COL27A1-203ENST00000468565 C9orf116Q5BN46 136 aaPredicted RBP9.13□□□□□ -0.95
COL27A1-203ENST00000468565 UNQ6190/PRO20217Q6UXQ8 127 aa9.12□□□□□ -0.95
COL27A1-203ENST00000468565 Q6ZRU5 148 aa9.11□□□□□ -0.95
COL27A1-203ENST00000468565 CAMK2N2Q96S95 79 aa9.11□□□□□ -0.95
COL27A1-203ENST00000468565 FAM19A5Q7Z5A7 132 aaPredicted RBP9.11□□□□□ -0.95
COL27A1-203ENST00000468565 LINC00643Q86TS7 51 aa9.11□□□□□ -0.95
COL27A1-203ENST00000468565 CRYGAP11844 174 aa9.1□□□□□ -0.95
COL27A1-203ENST00000468565 C10orf25Q5T742 122 aa9.1□□□□□ -0.95
COL27A1-203ENST00000468565 FAT3Q8TDW7 4589 aa9.1□□□□□ -0.95
COL27A1-203ENST00000468565 LOC107984640A0A0U1RRK4 108 aa9.09□□□□□ -0.95
COL27A1-203ENST00000468565 FAM236AA0A1B0GUQ0 79 aa9.09□□□□□ -0.95
COL27A1-203ENST00000468565 FAM236BA0A1B0GV22 79 aa9.09□□□□□ -0.95
COL27A1-203ENST00000468565 F8WDY8 70 aa9.09□□□□□ -0.95
COL27A1-203ENST00000468565 C7orf33Q8WU49 177 aa9.09□□□□□ -0.95
COL27A1-203ENST00000468565 LRP1Q07954 4544 aaKnown RBP9.09□□□□□ -0.95
COL27A1-203ENST00000468565 PRR3P79522 188 aaKnown RBP9.09□□□□□ -0.95
COL27A1-203ENST00000468565 OXTP01178 125 aa9.08□□□□□ -0.96
COL27A1-203ENST00000468565 COX7CP15954 63 aa9.08□□□□□ -0.96
COL27A1-203ENST00000468565 TMEM258P61165 79 aa9.08□□□□□ -0.96
COL27A1-203ENST00000468565 NCR3O14931 201 aa9.07□□□□□ -0.96
COL27A1-203ENST00000468565 S100A7L2Q5SY68 101 aa9.07□□□□□ -0.96
COL27A1-203ENST00000468565 GAGE2AQ6NT46 116 aa9.07□□□□□ -0.96
COL27A1-203ENST00000468565 ATOX1O00244 68 aa9.07□□□□□ -0.96
COL27A1-203ENST00000468565 C22orf24Q9Y442 160 aa9.07□□□□□ -0.96
COL27A1-203ENST00000468565 C6orf48Q9UBA6 75 aa9.05□□□□□ -0.96
COL27A1-203ENST00000468565 ORMDL1Q9P0S3 153 aa9.05□□□□□ -0.96
COL27A1-203ENST00000468565 RPL18AQ02543 176 aaKnown RBP9.03□□□□□ -0.96
COL27A1-203ENST00000468565 Q8NDZ9 215 aa9.03□□□□□ -0.96
COL27A1-203ENST00000468565 LINC00167Q96N53 147 aa9.03□□□□□ -0.96
COL27A1-203ENST00000468565 TLX1NBP0CAT3 122 aa9.01□□□□□ -0.97
COL27A1-203ENST00000468565 C6orf99Q4VX62 202 aa9.01□□□□□ -0.97
COL27A1-203ENST00000468565 IGLV6-57P01721 117 aa9□□□□□ -0.97
COL27A1-203ENST00000468565 OBSCN-AS1Q96MR7 158 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms