RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 Q6ZVQ6 151 aa5.43□□□□□ -1.54
BRCA1-208ENST00000468300 MUC7Q8TAX7 377 aa5.43□□□□□ -1.54
BRCA1-208ENST00000468300 IGKV2D-24A0A075B6R9 120 aa5.43□□□□□ -1.54
BRCA1-208ENST00000468300 CFC1BP0CG36 223 aa5.43□□□□□ -1.54
BRCA1-208ENST00000468300 CFC1P0CG37 223 aa5.43□□□□□ -1.54
BRCA1-208ENST00000468300 C9orf116Q5BN46 136 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-208ENST00000468300 UNQ6190/PRO20217Q6UXQ8 127 aa5.43□□□□□ -1.54
BRCA1-208ENST00000468300 HECTD4Q9Y4D8 3996 aa5.42□□□□□ -1.54
BRCA1-208ENST00000468300 SLPIP03973 132 aa5.42□□□□□ -1.54
BRCA1-208ENST00000468300 SPAG11BQ08648 103 aa5.42□□□□□ -1.54
BRCA1-208ENST00000468300 LINC00308Q8TCZ7 52 aa5.42□□□□□ -1.54
BRCA1-208ENST00000468300 GVQW2A0A096LPI5 108 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-208ENST00000468300 HIGD2BQ4VC39 106 aa5.42□□□□□ -1.54
BRCA1-208ENST00000468300 Q6ZRN7 208 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-208ENST00000468300 NKAPP1Q8N9T2 125 aa5.42□□□□□ -1.54
BRCA1-208ENST00000468300 C6orf48Q9UBA6 75 aa5.42□□□□□ -1.54
BRCA1-208ENST00000468300 LINC00337Q8N6G1 96 aa5.41□□□□□ -1.54
BRCA1-208ENST00000468300 PRSS2P07478 247 aa5.41□□□□□ -1.54
BRCA1-208ENST00000468300 UBE2DNLQ8IWF7 75 aa5.41□□□□□ -1.54
BRCA1-208ENST00000468300 Q8NDZ9 215 aa5.41□□□□□ -1.54
BRCA1-208ENST00000468300 LINC00643Q86TS7 51 aa5.4□□□□□ -1.54
BRCA1-208ENST00000468300 MIR7-3HGQ8N6C7 128 aa5.4□□□□□ -1.54
BRCA1-208ENST00000468300 NBDYA0A0U1RRE5 68 aa5.4□□□□□ -1.55
BRCA1-208ENST00000468300 H0Y9J4 135 aa5.4□□□□□ -1.55
BRCA1-208ENST00000468300 WWC2-AS2Q96NR7 200 aa5.4□□□□□ -1.55
BRCA1-208ENST00000468300 TRIAP1O43715 76 aa5.4□□□□□ -1.55
BRCA1-208ENST00000468300 Q75L30 129 aa5.4□□□□□ -1.55
BRCA1-208ENST00000468300 C20orf197Q8N268 126 aa5.4□□□□□ -1.55
BRCA1-208ENST00000468300 DNAH17Q9UFH2 4485 aa5.39□□□□□ -1.55
BRCA1-208ENST00000468300 Q6ZR54 194 aa5.39□□□□□ -1.55
BRCA1-208ENST00000468300 SPTSSBQ8NFR3 76 aa5.39□□□□□ -1.55
BRCA1-208ENST00000468300 IGKV2-28A0A075B6P5 120 aa5.38□□□□□ -1.55
BRCA1-208ENST00000468300 IGKV2D-28P01615 120 aa5.38□□□□□ -1.55
BRCA1-208ENST00000468300 COX17Q14061 63 aa5.38□□□□□ -1.55
BRCA1-208ENST00000468300 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-208ENST00000468300 UBE2BP63146 152 aa5.38□□□□□ -1.55
BRCA1-208ENST00000468300 A0A0B4J2C4 111 aa5.38□□□□□ -1.55
BRCA1-208ENST00000468300 LRCOL1A6NCL2 159 aa5.38□□□□□ -1.55
BRCA1-208ENST00000468300 LINC00158P58513 81 aa5.38□□□□□ -1.55
BRCA1-208ENST00000468300 FAT2Q9NYQ8 4349 aa5.37□□□□□ -1.55
BRCA1-208ENST00000468300 LECT2O14960 151 aa5.37□□□□□ -1.55
BRCA1-208ENST00000468300 SND1-IT1Q9HBX3 110 aa5.36□□□□□ -1.55
BRCA1-208ENST00000468300 SACSQ9NZJ4 4579 aa5.36□□□□□ -1.55
BRCA1-208ENST00000468300 TRBV30A0A0K0K1B3 111 aa5.36□□□□□ -1.55
BRCA1-208ENST00000468300 PKD1P98161 4303 aa5.36□□□□□ -1.55
BRCA1-208ENST00000468300 RMI2Q96E14 147 aa5.36□□□□□ -1.55
BRCA1-208ENST00000468300 CAMK2N2Q96S95 79 aa5.36□□□□□ -1.55
BRCA1-208ENST00000468300 DNAH11Q96DT5 4516 aa5.35□□□□□ -1.55
BRCA1-208ENST00000468300 ACYP1P07311 99 aa5.35□□□□□ -1.55
BRCA1-208ENST00000468300 CLEC2BQ92478 149 aa5.35□□□□□ -1.55
BRCA1-208ENST00000468300 PRO1854Q9UHT4 67 aa5.35□□□□□ -1.55
BRCA1-208ENST00000468300 M0R2N4 97 aa5.35□□□□□ -1.55
BRCA1-208ENST00000468300 Q6ZRP5 223 aa5.35□□□□□ -1.55
BRCA1-208ENST00000468300 FAM30AQ9NZY2 134 aa5.35□□□□□ -1.55
BRCA1-208ENST00000468300 PRR3P79522 188 aaKnown RBP5.35□□□□□ -1.55
BRCA1-208ENST00000468300 LINC00476Q8WZB0 136 aa5.35□□□□□ -1.55
BRCA1-208ENST00000468300 LINC01554Q52M75 96 aa5.34□□□□□ -1.55
BRCA1-208ENST00000468300 HIST1H4AP62805 103 aaKnown RBP5.34□□□□□ -1.55
BRCA1-208ENST00000468300 SYCNQ0VAF6 134 aa5.34□□□□□ -1.55
BRCA1-208ENST00000468300 C3orf84H3BNL1 204 aa5.33□□□□□ -1.56
BRCA1-208ENST00000468300 PLA2G1BP04054 148 aaKnown RBP5.33□□□□□ -1.56
BRCA1-208ENST00000468300 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
BRCA1-208ENST00000468300 TLX1NBP0CAT3 122 aa5.33□□□□□ -1.56
BRCA1-208ENST00000468300 C9orf129Q5T035 196 aaKnown RBP5.33□□□□□ -1.56
BRCA1-208ENST00000468300 KRTAP7-1Q8IUC3 87 aa5.33□□□□□ -1.56
BRCA1-208ENST00000468300 CNBPP62633 177 aaKnown RBP5.32□□□□□ -1.56
BRCA1-208ENST00000468300 PHF5AQ7RTV0 110 aaKnown RBP5.32□□□□□ -1.56
BRCA1-208ENST00000468300 H7BZZ5 65 aa5.32□□□□□ -1.56
BRCA1-208ENST00000468300 LY6G6CO95867 125 aa5.31□□□□□ -1.56
BRCA1-208ENST00000468300 UBE2AP49459 152 aa5.31□□□□□ -1.56
BRCA1-208ENST00000468300 XAGE1AQ9HD64 81 aa5.31□□□□□ -1.56
BRCA1-208ENST00000468300 DNAH5Q8TE73 4624 aa5.31□□□□□ -1.56
BRCA1-208ENST00000468300 DIRC1Q969H9 104 aa5.3□□□□□ -1.56
BRCA1-208ENST00000468300 KMT2CQ8NEZ4 4911 aaKnown RBP5.3□□□□□ -1.56
BRCA1-208ENST00000468300 TRBV10-2A0A0K0K1G8 114 aa5.29□□□□□ -1.56
BRCA1-208ENST00000468300 F8WEM9 126 aa5.29□□□□□ -1.56
BRCA1-208ENST00000468300 H7C2G1 150 aa5.29□□□□□ -1.56
BRCA1-208ENST00000468300 PSCAO43653 123 aa5.29□□□□□ -1.56
BRCA1-208ENST00000468300 ATXN8Q156A1 80 aa5.29□□□□□ -1.56
BRCA1-208ENST00000468300 FAM229BQ4G0N7 80 aa5.29□□□□□ -1.56
BRCA1-208ENST00000468300 SDIM1Q6ZPB5 146 aa5.29□□□□□ -1.56
BRCA1-208ENST00000468300 LINC00528Q8N1L1 170 aa5.29□□□□□ -1.56
BRCA1-208ENST00000468300 PSPHP1O15172 72 aa5.29□□□□□ -1.56
BRCA1-208ENST00000468300 RYR2Q92736 4967 aa5.29□□□□□ -1.56
BRCA1-208ENST00000468300 Q8N814 137 aa5.29□□□□□ -1.56
BRCA1-208ENST00000468300 SMCR5Q8TEV8 140 aa5.29□□□□□ -1.56
BRCA1-208ENST00000468300 A0A087WTM6 91 aa5.28□□□□□ -1.56
BRCA1-208ENST00000468300 IGHV6-1A0A0B4J1U7 121 aa5.28□□□□□ -1.56
BRCA1-208ENST00000468300 ATP5EP56381 51 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-208ENST00000468300 FAM168BA1KXE4 195 aa5.28□□□□□ -1.56
BRCA1-208ENST00000468300 NCR3O14931 201 aa5.28□□□□□ -1.56
BRCA1-208ENST00000468300 SMIM11BQ8TCY0 68 aa5.28□□□□□ -1.56
BRCA1-208ENST00000468300 FAM218AQ96MZ4 157 aa5.28□□□□□ -1.56
BRCA1-208ENST00000468300 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-208ENST00000468300 TRAV13-2A0A0B4J235 113 aa5.28□□□□□ -1.56
BRCA1-208ENST00000468300 IGLV6-57P01721 117 aa5.28□□□□□ -1.56
BRCA1-208ENST00000468300 REG3GQ6UW15 175 aa5.28□□□□□ -1.56
BRCA1-208ENST00000468300 DNAH8Q96JB1 4490 aa5.27□□□□□ -1.57
BRCA1-208ENST00000468300 A0A087WVE0 104 aa5.27□□□□□ -1.57
BRCA1-208ENST00000468300 RPL28P46779 137 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms