RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 HIST1H2BCP62807 126 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 PMVKQ15126 192 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 HIST2H2BEQ16778 126 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.23□□□□□ -1.57
HDAC3-203ENST00000467533 Q6ZRX8 168 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 C18orf32Q8TCD1 76 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 HIST1H2BHQ93079 126 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 HIST1H2BNQ99877 126 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 HIST1H2BMQ99879 126 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 CST9LQ9H4G1 147 aa5.23□□□□□ -1.57
HDAC3-203ENST00000467533 NXT2Q9NPJ8 142 aaKnown RBP5.23□□□□□ -1.57
HDAC3-203ENST00000467533 SFTA2Q6UW10 78 aa5.22□□□□□ -1.57
HDAC3-203ENST00000467533 H7C2G1 150 aa5.21□□□□□ -1.58
HDAC3-203ENST00000467533 LINC01546A6NGU7 62 aa5.2□□□□□ -1.58
HDAC3-203ENST00000467533 LINC00614P0C842 121 aa5.2□□□□□ -1.58
HDAC3-203ENST00000467533 COA6Q5JTJ3 125 aaKnown RBP5.2□□□□□ -1.58
HDAC3-203ENST00000467533 C1orf195Q5TG92 126 aa5.2□□□□□ -1.58
HDAC3-203ENST00000467533 ATP11AUNQ6ZP68 121 aa5.2□□□□□ -1.58
HDAC3-203ENST00000467533 BAGE3Q86Y29 109 aa5.2□□□□□ -1.58
HDAC3-203ENST00000467533 ST20-AS1Q8NBB2 130 aa5.2□□□□□ -1.58
HDAC3-203ENST00000467533 ZNF22P17026 224 aaPredicted RBP5.19□□□□□ -1.58
HDAC3-203ENST00000467533 LGALS3P17931 250 aaKnown RBP5.19□□□□□ -1.58
HDAC3-203ENST00000467533 FA2HQ7L5A8 372 aa5.19□□□□□ -1.58
HDAC3-203ENST00000467533 CHCHD1Q96BP2 118 aaKnown RBP5.19□□□□□ -1.58
HDAC3-203ENST00000467533 URB1-AS1Q96HZ7 61 aa5.19□□□□□ -1.58
HDAC3-203ENST00000467533 IGLC3P0DOY3 106 aa5.18□□□□□ -1.58
HDAC3-203ENST00000467533 NDUFA6P56556 154 aa5.18□□□□□ -1.58
HDAC3-203ENST00000467533 JOSD1Q15040 202 aaPredicted RBP5.18□□□□□ -1.58
HDAC3-203ENST00000467533 TRBV20-1A0A075B6N2 111 aa5.17□□□□□ -1.58
HDAC3-203ENST00000467533 LINC01549A6NIU2 74 aa5.17□□□□□ -1.58
HDAC3-203ENST00000467533 SERF1AO75920 110 aa5.17□□□□□ -1.58
HDAC3-203ENST00000467533 S100A6P06703 90 aa5.17□□□□□ -1.58
HDAC3-203ENST00000467533 DDTP30046 118 aa5.17□□□□□ -1.58
HDAC3-203ENST00000467533 LINC00310P59036 64 aa5.17□□□□□ -1.58
HDAC3-203ENST00000467533 SLC25A34Q6PIV7 304 aa5.17□□□□□ -1.58
HDAC3-203ENST00000467533 HSBP1O75506 76 aa5.16□□□□□ -1.58
HDAC3-203ENST00000467533 SMIM13P0DJ93 91 aa5.16□□□□□ -1.58
HDAC3-203ENST00000467533 CD164Q04900 197 aa5.16□□□□□ -1.58
HDAC3-203ENST00000467533 C5orf52A6NGY3 159 aa5.15□□□□□ -1.59
HDAC3-203ENST00000467533 HBDP02042 147 aa5.15□□□□□ -1.59
HDAC3-203ENST00000467533 ANKRD39Q53RE8 183 aa5.15□□□□□ -1.59
HDAC3-203ENST00000467533 MEIG1Q5JSS6 88 aa5.15□□□□□ -1.59
HDAC3-203ENST00000467533 SMIM29Q86T20 159 aa5.15□□□□□ -1.59
HDAC3-203ENST00000467533 MIR7-3HGQ8N6C7 128 aa5.15□□□□□ -1.59
HDAC3-203ENST00000467533 LAMTOR3Q9UHA4 124 aa5.15□□□□□ -1.59
HDAC3-203ENST00000467533 A0A096LNJ9 63 aa5.14□□□□□ -1.59
HDAC3-203ENST00000467533 SNRPEP62304 92 aaKnown RBP5.14□□□□□ -1.59
HDAC3-203ENST00000467533 Q5XG85 94 aa5.14□□□□□ -1.59
HDAC3-203ENST00000467533 C20orf166-AS1Q96NR2 134 aa5.14□□□□□ -1.59
HDAC3-203ENST00000467533 FAM236DA0A1B0GTK5 79 aa5.13□□□□□ -1.59
HDAC3-203ENST00000467533 FAM236CP0DP71 79 aa5.13□□□□□ -1.59
HDAC3-203ENST00000467533 PMCHL1Q16048 86 aa5.13□□□□□ -1.59
HDAC3-203ENST00000467533 TMEM170BQ5T4T1 132 aa5.13□□□□□ -1.59
HDAC3-203ENST00000467533 HIST3H2BBQ8N257 126 aa5.13□□□□□ -1.59
HDAC3-203ENST00000467533 PRO1933Q9H354 126 aa5.13□□□□□ -1.59
HDAC3-203ENST00000467533 LEPROTL1O95214 131 aa5.12□□□□□ -1.59
HDAC3-203ENST00000467533 SPRR1BP22528 89 aa5.12□□□□□ -1.59
HDAC3-203ENST00000467533 S100A2P29034 98 aa5.12□□□□□ -1.59
HDAC3-203ENST00000467533 Q75L30 129 aa5.12□□□□□ -1.59
HDAC3-203ENST00000467533 HSPB8Q9UJY1 196 aa5.12□□□□□ -1.59
HDAC3-203ENST00000467533 TRAV23DV6A0A075B6W5 121 aa5.11□□□□□ -1.59
HDAC3-203ENST00000467533 Q1RN00 199 aa5.11□□□□□ -1.59
HDAC3-203ENST00000467533 S100A7L2Q5SY68 101 aa5.11□□□□□ -1.59
HDAC3-203ENST00000467533 TRBV10-2A0A0K0K1G8 114 aa5.1□□□□□ -1.59
HDAC3-203ENST00000467533 C11orf86A6NJI1 115 aa5.1□□□□□ -1.59
HDAC3-203ENST00000467533 FABP4P15090 132 aa5.1□□□□□ -1.59
HDAC3-203ENST00000467533 PCP2Q8IVA1 136 aa5.1□□□□□ -1.59
HDAC3-203ENST00000467533 IFI27L1Q96BM0 104 aa5.1□□□□□ -1.59
HDAC3-203ENST00000467533 HIST1H2BLQ99880 126 aa5.1□□□□□ -1.59
HDAC3-203ENST00000467533 MUC12Q9UKN1 5478 aa5.09□□□□□ -1.59
HDAC3-203ENST00000467533 C6orf99Q4VX62 202 aa5.09□□□□□ -1.59
HDAC3-203ENST00000467533 OBSCN-AS1Q96MR7 158 aa5.09□□□□□ -1.59
HDAC3-203ENST00000467533 ZNF73O43830 326 aaPredicted RBP5.08□□□□□ -1.6
HDAC3-203ENST00000467533 MAP1LC3CQ9BXW4 147 aa5.08□□□□□ -1.6
HDAC3-203ENST00000467533 SPANXB1Q9NS25 103 aaPredicted RBP5.08□□□□□ -1.6
HDAC3-203ENST00000467533 TRAV12-1A0A0B4J245 112 aa5.07□□□□□ -1.6
HDAC3-203ENST00000467533 HINT1P49773 126 aaPredicted RBP5.07□□□□□ -1.6
HDAC3-203ENST00000467533 PET117Q6UWS5 81 aa5.07□□□□□ -1.6
HDAC3-203ENST00000467533 A0A0G2JQZ4 141 aa5.06□□□□□ -1.6
HDAC3-203ENST00000467533 SYS1-DBNDD2H3BUS1 97 aa5.06□□□□□ -1.6
HDAC3-203ENST00000467533 TCL1BO95988 128 aa5.06□□□□□ -1.6
HDAC3-203ENST00000467533 C3orf79P0CE67 100 aa5.06□□□□□ -1.6
HDAC3-203ENST00000467533 AKR1D1P51857 326 aa5.06□□□□□ -1.6
HDAC3-203ENST00000467533 HERV-K104P63124 156 aa5.06□□□□□ -1.6
HDAC3-203ENST00000467533 LINC00587B1AMM8 73 aa5.05□□□□□ -1.6
HDAC3-203ENST00000467533 KRTDAPP60985 99 aa5.05□□□□□ -1.6
HDAC3-203ENST00000467533 LINC01545Q5VT33 79 aa5.05□□□□□ -1.6
HDAC3-203ENST00000467533 DEFB105AQ8NG35 78 aa5.05□□□□□ -1.6
HDAC3-203ENST00000467533 TAL2Q16559 108 aa5.04□□□□□ -1.6
HDAC3-203ENST00000467533 MIEN1Q9BRT3 115 aa5.04□□□□□ -1.6
HDAC3-203ENST00000467533 TMEM223A0PJW6 202 aa5.03□□□□□ -1.6
HDAC3-203ENST00000467533 H0Y8G0 127 aa5.03□□□□□ -1.6
HDAC3-203ENST00000467533 PLNP26678 52 aa5.03□□□□□ -1.6
HDAC3-203ENST00000467533 DHRS4-AS1Q9P1J3 65 aa5.03□□□□□ -1.6
HDAC3-203ENST00000467533 LOC105371267A0A1B0GV96 52 aa5.02□□□□□ -1.61
HDAC3-203ENST00000467533 DPM2O94777 84 aa5.02□□□□□ -1.61
HDAC3-203ENST00000467533 LOC107984156A0A0G2JMH3 177 aa5.01□□□□□ -1.61
HDAC3-203ENST00000467533 SCGB1D1O95968 90 aa5.01□□□□□ -1.61
HDAC3-203ENST00000467533 IGKCP01834 107 aa5.01□□□□□ -1.61
HDAC3-203ENST00000467533 ARL17AQ8IVW1 177 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 294 ms