RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 FAM19A2Q8N3H0 131 aa2.66□□□□□ -1.98
GTF3C3-208ENST00000455546 Q8NBF4 154 aa2.66□□□□□ -1.98
GTF3C3-208ENST00000455546 SPRR4Q96PI1 79 aa2.66□□□□□ -1.98
GTF3C3-208ENST00000455546 H0Y8G0 127 aa2.65□□□□□ -1.99
GTF3C3-208ENST00000455546 MEIG1Q5JSS6 88 aa2.65□□□□□ -1.99
GTF3C3-208ENST00000455546 MIR7-3HGQ8N6C7 128 aa2.65□□□□□ -1.99
GTF3C3-208ENST00000455546 IFI27L1Q96BM0 104 aa2.65□□□□□ -1.99
GTF3C3-208ENST00000455546 TRBV10-3A0A0K0K1G6 114 aa2.64□□□□□ -1.99
GTF3C3-208ENST00000455546 KRTAP4-16G5E9R7 235 aaPredicted RBP2.64□□□□□ -1.99
GTF3C3-208ENST00000455546 ERC2-IT1O76042 136 aa2.64□□□□□ -1.99
GTF3C3-208ENST00000455546 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
GTF3C3-208ENST00000455546 SPAG11AQ6PDA7 123 aa2.64□□□□□ -1.99
GTF3C3-208ENST00000455546 LINC00337Q8N6G1 96 aa2.64□□□□□ -1.99
GTF3C3-208ENST00000455546 KRTAP4-1Q9BYQ7 146 aa2.64□□□□□ -1.99
GTF3C3-208ENST00000455546 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
GTF3C3-208ENST00000455546 KCNQ1DNQ9H478 68 aa2.64□□□□□ -1.99
GTF3C3-208ENST00000455546 FAT4Q6V0I7 4981 aa2.64□□□□□ -1.99
GTF3C3-208ENST00000455546 TRAV12-1A0A0B4J245 112 aa2.63□□□□□ -1.99
GTF3C3-208ENST00000455546 ETDCA0A1B0GVM5 59 aa2.63□□□□□ -1.99
GTF3C3-208ENST00000455546 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
GTF3C3-208ENST00000455546 SNAPINO95295 136 aa2.63□□□□□ -1.99
GTF3C3-208ENST00000455546 SPRR1AP35321 89 aa2.63□□□□□ -1.99
GTF3C3-208ENST00000455546 TSPEAR-AS2P59090 65 aa2.63□□□□□ -1.99
GTF3C3-208ENST00000455546 KRTAP13-3Q3SY46 172 aa2.63□□□□□ -1.99
GTF3C3-208ENST00000455546 SFTA2Q6UW10 78 aa2.63□□□□□ -1.99
GTF3C3-208ENST00000455546 CHCHD1Q96BP2 118 aaKnown RBP2.63□□□□□ -1.99
GTF3C3-208ENST00000455546 YPEL4Q96NS1 127 aa2.63□□□□□ -1.99
GTF3C3-208ENST00000455546 PMCHL2Q9BQD1 86 aa2.63□□□□□ -1.99
GTF3C3-208ENST00000455546 NDUFA12Q9UI09 145 aa2.63□□□□□ -1.99
GTF3C3-208ENST00000455546 MUC17Q685J3 4493 aa2.62□□□□□ -1.99
GTF3C3-208ENST00000455546 MYMXA0A1B0GTQ4 84 aa2.62□□□□□ -1.99
GTF3C3-208ENST00000455546 HSBP1O75506 76 aa2.62□□□□□ -1.99
GTF3C3-208ENST00000455546 TRGC2P03986 189 aa2.62□□□□□ -1.99
GTF3C3-208ENST00000455546 NDUFV3P56181 108 aaKnown RBP2.62□□□□□ -1.99
GTF3C3-208ENST00000455546 NPC2P61916 151 aa2.62□□□□□ -1.99
GTF3C3-208ENST00000455546 CTAG1AP78358 180 aa2.62□□□□□ -1.99
GTF3C3-208ENST00000455546 MOBPQ13875 183 aa2.62□□□□□ -1.99
GTF3C3-208ENST00000455546 FP248Q71RG6 208 aaPredicted RBP2.62□□□□□ -1.99
GTF3C3-208ENST00000455546 SVBPQ8N300 66 aa2.62□□□□□ -1.99
GTF3C3-208ENST00000455546 Q9BRP9 147 aa2.62□□□□□ -1.99
GTF3C3-208ENST00000455546 ZNF706Q9Y5V0 76 aaPredicted RBP2.62□□□□□ -1.99
GTF3C3-208ENST00000455546 LEPROTO15243 131 aa2.61□□□□□ -1.99
GTF3C3-208ENST00000455546 SPINK1P00995 79 aa2.61□□□□□ -1.99
GTF3C3-208ENST00000455546 FABP4P15090 132 aa2.61□□□□□ -1.99
GTF3C3-208ENST00000455546 MT3P25713 68 aa2.61□□□□□ -1.99
GTF3C3-208ENST00000455546 DDTP30046 118 aa2.61□□□□□ -1.99
GTF3C3-208ENST00000455546 NDUFA5Q16718 116 aa2.61□□□□□ -1.99
GTF3C3-208ENST00000455546 ASB16-AS1Q495Z4 193 aa2.61□□□□□ -1.99
GTF3C3-208ENST00000455546 LINC00483Q53H64 154 aa2.61□□□□□ -1.99
GTF3C3-208ENST00000455546 Q8N377 158 aa2.61□□□□□ -1.99
GTF3C3-208ENST00000455546 ST20-AS1Q8NBB2 130 aa2.61□□□□□ -1.99
GTF3C3-208ENST00000455546 MAP1LC3CQ9BXW4 147 aa2.61□□□□□ -1.99
GTF3C3-208ENST00000455546 LOC107984156A0A0G2JMH3 177 aa2.6□□□□□ -1.99
GTF3C3-208ENST00000455546 LINC00587B1AMM8 73 aa2.6□□□□□ -1.99
GTF3C3-208ENST00000455546 J3QQQ9 107 aa2.6□□□□□ -1.99
GTF3C3-208ENST00000455546 SERF1AO75920 110 aa2.6□□□□□ -1.99
GTF3C3-208ENST00000455546 LEPROTL1O95214 131 aa2.6□□□□□ -1.99
GTF3C3-208ENST00000455546 S100A7L2Q5SY68 101 aa2.6□□□□□ -1.99
GTF3C3-208ENST00000455546 HRCT1Q6UXD1 115 aa2.6□□□□□ -1.99
GTF3C3-208ENST00000455546 SOSTDC1Q6X4U4 206 aa2.6□□□□□ -1.99
GTF3C3-208ENST00000455546 SSBP3-AS1Q7Z2R9 100 aa2.6□□□□□ -1.99
GTF3C3-208ENST00000455546 ARL17AQ8IVW1 177 aa2.6□□□□□ -1.99
GTF3C3-208ENST00000455546 IGLV6-57P01721 117 aa2.59□□□□□ -1.99
GTF3C3-208ENST00000455546 LGALS3P17931 250 aaKnown RBP2.59□□□□□ -1.99
GTF3C3-208ENST00000455546 S100A12P80511 92 aa2.59□□□□□ -1.99
GTF3C3-208ENST00000455546 C9orf153Q5TBE3 101 aa2.59□□□□□ -1.99
GTF3C3-208ENST00000455546 Q6ZRX8 168 aa2.59□□□□□ -1.99
GTF3C3-208ENST00000455546 LINC00518Q8N0U6 118 aa2.59□□□□□ -1.99
GTF3C3-208ENST00000455546 TRAV23DV6A0A075B6W5 121 aa2.58□□□□□ -2
GTF3C3-208ENST00000455546 A0A0J9YXY3 114 aa2.58□□□□□ -2
GTF3C3-208ENST00000455546 TRBV10-2A0A0K0K1G8 114 aa2.58□□□□□ -2
GTF3C3-208ENST00000455546 SLC25A20O43772 301 aa2.58□□□□□ -2
GTF3C3-208ENST00000455546 ZNF73O43830 326 aaPredicted RBP2.58□□□□□ -2
GTF3C3-208ENST00000455546 DPM2O94777 84 aa2.58□□□□□ -2
GTF3C3-208ENST00000455546 IGKCP01834 107 aa2.58□□□□□ -2
GTF3C3-208ENST00000455546 MIEN1Q9BRT3 115 aa2.58□□□□□ -2
GTF3C3-208ENST00000455546 OCR1Q9BZK8 76 aa2.58□□□□□ -2
GTF3C3-208ENST00000455546 SPANXB1Q9NS25 103 aaPredicted RBP2.58□□□□□ -2
GTF3C3-208ENST00000455546 C9orf92A6NGG3 77 aa2.57□□□□□ -2
GTF3C3-208ENST00000455546 KRTAP16-1A8MUX0 517 aa2.57□□□□□ -2
GTF3C3-208ENST00000455546 NDUFC2O95298 119 aa2.57□□□□□ -2
GTF3C3-208ENST00000455546 PLNP26678 52 aa2.57□□□□□ -2
GTF3C3-208ENST00000455546 NMUP48645 174 aa2.57□□□□□ -2
GTF3C3-208ENST00000455546 HERVK_113P61574 105 aa2.57□□□□□ -2
GTF3C3-208ENST00000455546 SLC7A5P1Q8MH63 180 aa2.57□□□□□ -2
GTF3C3-208ENST00000455546 OR13C6PQ8NH95 151 aa2.57□□□□□ -2
GTF3C3-208ENST00000455546 HSPB8Q9UJY1 196 aa2.57□□□□□ -2
GTF3C3-208ENST00000455546 A0A0G2JQZ4 141 aa2.56□□□□□ -2
GTF3C3-208ENST00000455546 COLCA2A8K830 154 aa2.56□□□□□ -2
GTF3C3-208ENST00000455546 E9PLD3 99 aa2.56□□□□□ -2
GTF3C3-208ENST00000455546 H7C2G1 150 aa2.56□□□□□ -2
GTF3C3-208ENST00000455546 RPS29P62273 56 aaKnown RBP2.56□□□□□ -2
GTF3C3-208ENST00000455546 JOSD1Q15040 202 aaPredicted RBP2.56□□□□□ -2
GTF3C3-208ENST00000455546 PCOTHQ58A44 107 aa2.56□□□□□ -2
GTF3C3-208ENST00000455546 DEFB105AQ8NG35 78 aa2.56□□□□□ -2
GTF3C3-208ENST00000455546 TTTY13Q9BZ97 58 aa2.56□□□□□ -2
GTF3C3-208ENST00000455546 HINT1P49773 126 aaPredicted RBP2.55□□□□□ -2
GTF3C3-208ENST00000455546 Q1RN00 199 aa2.55□□□□□ -2
GTF3C3-208ENST00000455546 LINC00308Q8TCZ7 52 aa2.55□□□□□ -2
GTF3C3-208ENST00000455546 IGLV8-61A0A075B6I0 122 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms