RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 Q8N8P6 123 aa1.89□□□□□ -2.11
RBM39-220ENST00000455343 PRELID3AQ96N28 172 aa1.89□□□□□ -2.11
RBM39-220ENST00000455343 ERG28Q9UKR5 140 aa1.89□□□□□ -2.11
RBM39-220ENST00000455343 LAMTOR2Q9Y2Q5 125 aa1.89□□□□□ -2.11
RBM39-220ENST00000455343 LOC389332A0A1B0GUA5 103 aa1.88□□□□□ -2.11
RBM39-220ENST00000455343 MT1FP04733 61 aa1.88□□□□□ -2.11
RBM39-220ENST00000455343 S100A8P05109 93 aa1.88□□□□□ -2.11
RBM39-220ENST00000455343 SRP19P09132 144 aaKnown RBP1.88□□□□□ -2.11
RBM39-220ENST00000455343 SPINK8P0C7L1 97 aa1.88□□□□□ -2.11
RBM39-220ENST00000455343 RPL23P62829 140 aaKnown RBP1.88□□□□□ -2.11
RBM39-220ENST00000455343 MRPL54Q6P161 138 aaKnown RBP1.88□□□□□ -2.11
RBM39-220ENST00000455343 AKAP14Q86UN6 197 aa1.88□□□□□ -2.11
RBM39-220ENST00000455343 SLC51BQ86UW2 128 aa1.88□□□□□ -2.11
RBM39-220ENST00000455343 TOMM6Q96B49 74 aa1.88□□□□□ -2.11
RBM39-220ENST00000455343 MAP1LC3AQ9H492 121 aa1.88□□□□□ -2.11
RBM39-220ENST00000455343 ADCYAP1P18509 176 aa1.87□□□□□ -2.11
RBM39-220ENST00000455343 G0S2P27469 103 aa1.87□□□□□ -2.11
RBM39-220ENST00000455343 CEBPGP53567 150 aa1.87□□□□□ -2.11
RBM39-220ENST00000455343 Q5XG85 94 aa1.87□□□□□ -2.11
RBM39-220ENST00000455343 ERASQ7Z444 233 aa1.87□□□□□ -2.11
RBM39-220ENST00000455343 ATP5L2Q7Z4Y8 100 aa1.87□□□□□ -2.11
RBM39-220ENST00000455343 Q9BRP9 147 aa1.87□□□□□ -2.11
RBM39-220ENST00000455343 LIMD2Q9BT23 127 aa1.87□□□□□ -2.11
RBM39-220ENST00000455343 CST9LQ9H4G1 147 aa1.87□□□□□ -2.11
RBM39-220ENST00000455343 BATF3Q9NR55 127 aa1.87□□□□□ -2.11
RBM39-220ENST00000455343 LINC00846Q9NV44 126 aa1.87□□□□□ -2.11
RBM39-220ENST00000455343 ETDCA0A1B0GVM5 59 aa1.86□□□□□ -2.11
RBM39-220ENST00000455343 SCGB1D1O95968 90 aa1.86□□□□□ -2.11
RBM39-220ENST00000455343 Q6ZRX8 168 aa1.86□□□□□ -2.11
RBM39-220ENST00000455343 Q6ZVH6 145 aa1.86□□□□□ -2.11
RBM39-220ENST00000455343 ZNF625Q96I27 306 aaPredicted RBP1.86□□□□□ -2.11
RBM39-220ENST00000455343 NXT2Q9NPJ8 142 aaKnown RBP1.86□□□□□ -2.11
RBM39-220ENST00000455343 MDN1Q9NU22 5596 aa1.86□□□□□ -2.11
RBM39-220ENST00000455343 TRAV9-1A0A075B6T8 112 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 TRBV10-3A0A0K0K1G6 114 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 C5orf52A6NGY3 159 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 LINC01549A6NIU2 74 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 C9JQL5 133 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 H3BRM9 83 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 IGLC3P0DOY3 106 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 ZNF22P17026 224 aaPredicted RBP1.85□□□□□ -2.11
RBM39-220ENST00000455343 SPRR1BP22528 89 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 PMVKQ15126 192 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 ADIRFQ15847 76 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 KRTAP20-1Q3LI63 56 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 C9orf153Q5TBE3 101 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 C1orf195Q5TG92 126 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 Q6Q795 121 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 SFTA2Q6UW10 78 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 ALKAL2Q6UX46 152 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 FAM218AQ96MZ4 157 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 SCGB3A1Q96QR1 104 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 NAT8Q9UHE5 227 aa1.85□□□□□ -2.11
RBM39-220ENST00000455343 CHTOPQ9Y3Y2 248 aaKnown RBP1.85□□□□□ -2.11
RBM39-220ENST00000455343 LOC107984156A0A0G2JMH3 177 aa1.84□□□□□ -2.11
RBM39-220ENST00000455343 C20orf202A1L168 122 aa1.84□□□□□ -2.11
RBM39-220ENST00000455343 LINC01546A6NGU7 62 aa1.84□□□□□ -2.11
RBM39-220ENST00000455343 LINC00158P58513 81 aa1.84□□□□□ -2.11
RBM39-220ENST00000455343 KRTAP10-10P60014 251 aa1.84□□□□□ -2.11
RBM39-220ENST00000455343 CD164Q04900 197 aa1.84□□□□□ -2.11
RBM39-220ENST00000455343 RGS21Q2M5E4 152 aa1.84□□□□□ -2.11
RBM39-220ENST00000455343 ARL17AQ8IVW1 177 aa1.84□□□□□ -2.11
RBM39-220ENST00000455343 BOD1L2Q8IYS8 172 aa1.84□□□□□ -2.11
RBM39-220ENST00000455343 KMT2DO14686 5537 aa1.83□□□□□ -2.12
RBM39-220ENST00000455343 TRBV10-2A0A0K0K1G8 114 aa1.83□□□□□ -2.12
RBM39-220ENST00000455343 A0A0U1RRA0 63 aa1.83□□□□□ -2.12
RBM39-220ENST00000455343 NCR3O14931 201 aa1.83□□□□□ -2.12
RBM39-220ENST00000455343 HRCT1Q6UXD1 115 aa1.83□□□□□ -2.12
RBM39-220ENST00000455343 TCTE3Q8IZS6 198 aa1.83□□□□□ -2.12
RBM39-220ENST00000455343 ST20-AS1Q8NBB2 130 aa1.83□□□□□ -2.12
RBM39-220ENST00000455343 SMIM13P0DJ93 91 aa1.82□□□□□ -2.12
RBM39-220ENST00000455343 DDTP30046 118 aa1.82□□□□□ -2.12
RBM39-220ENST00000455343 S100A12P80511 92 aa1.82□□□□□ -2.12
RBM39-220ENST00000455343 JOSD1Q15040 202 aaPredicted RBP1.82□□□□□ -2.12
RBM39-220ENST00000455343 C10orf91Q5T1B1 145 aa1.82□□□□□ -2.12
RBM39-220ENST00000455343 FA2HQ7L5A8 372 aa1.82□□□□□ -2.12
RBM39-220ENST00000455343 MIR7-3HGQ8N6C7 128 aa1.82□□□□□ -2.12
RBM39-220ENST00000455343 A0A096LNJ9 63 aa1.81□□□□□ -2.12
RBM39-220ENST00000455343 C11orf86A6NJI1 115 aa1.81□□□□□ -2.12
RBM39-220ENST00000455343 SLC25A34Q6PIV7 304 aa1.81□□□□□ -2.12
RBM39-220ENST00000455343 ATP11AUNQ6ZP68 121 aa1.81□□□□□ -2.12
RBM39-220ENST00000455343 LAMTOR3Q9UHA4 124 aa1.81□□□□□ -2.12
RBM39-220ENST00000455343 TMEM223A0PJW6 202 aa1.8□□□□□ -2.12
RBM39-220ENST00000455343 H7C2G1 150 aa1.8□□□□□ -2.12
RBM39-220ENST00000455343 ZNF73O43830 326 aaPredicted RBP1.8□□□□□ -2.12
RBM39-220ENST00000455343 NDUFC2O95298 119 aa1.8□□□□□ -2.12
RBM39-220ENST00000455343 Q1RN00 199 aa1.8□□□□□ -2.12
RBM39-220ENST00000455343 TMEM170BQ5T4T1 132 aa1.8□□□□□ -2.12
RBM39-220ENST00000455343 PRO1933Q9H354 126 aa1.8□□□□□ -2.12
RBM39-220ENST00000455343 TRBV20-1A0A075B6N2 111 aa1.79□□□□□ -2.12
RBM39-220ENST00000455343 TRAV23DV6A0A075B6W5 121 aa1.79□□□□□ -2.12
RBM39-220ENST00000455343 LINC00587B1AMM8 73 aa1.79□□□□□ -2.12
RBM39-220ENST00000455343 ATP6V1G1O75348 118 aa1.79□□□□□ -2.12
RBM39-220ENST00000455343 AKR1D1P51857 326 aa1.79□□□□□ -2.12
RBM39-220ENST00000455343 HERV-K104P63124 156 aa1.79□□□□□ -2.12
RBM39-220ENST00000455343 PEA15Q15121 130 aa1.79□□□□□ -2.12
RBM39-220ENST00000455343 BAGE3Q86Y29 109 aa1.79□□□□□ -2.12
RBM39-220ENST00000455343 C20orf166-AS1Q96NR2 134 aa1.79□□□□□ -2.12
RBM39-220ENST00000455343 SPANXB1Q9NS25 103 aaPredicted RBP1.79□□□□□ -2.12
RBM39-220ENST00000455343 A0A0G2JQZ4 141 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms