RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 MYCBPQ99417 103 aaPredicted RBP0.09□□□□□ -2.4
LRCH3-209ENST00000452660 NKX6-2Q9C056 277 aaPredicted RBP0.09□□□□□ -2.4
LRCH3-209ENST00000452660 TMEM191AQ9H0A3 160 aa0.09□□□□□ -2.4
LRCH3-209ENST00000452660 LINC00472Q9H8W2 130 aa0.09□□□□□ -2.4
LRCH3-209ENST00000452660 NHP2Q9NX24 153 aaKnown RBP0.09□□□□□ -2.4
LRCH3-209ENST00000452660 GSKIPQ9P0R6 139 aa0.09□□□□□ -2.4
LRCH3-209ENST00000452660 CDKN2A-AS1Q9UH64 79 aa0.09□□□□□ -2.4
LRCH3-209ENST00000452660 EPDR1Q9UM22 224 aa0.09□□□□□ -2.4
LRCH3-209ENST00000452660 LSM2Q9Y333 95 aaKnown RBP0.09□□□□□ -2.4
LRCH3-209ENST00000452660 LOC389332A0A1B0GUA5 103 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 ERICH4A6NGS2 130 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 TCAPO15273 167 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 IFNA1P01562 189 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 IGLC6P0CF74 106 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 DDTP30046 118 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 BCAP31P51572 246 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 POLR2KP53803 58 aaKnown RBP0.08□□□□□ -2.4
LRCH3-209ENST00000452660 ATP5IP56385 69 aaPredicted RBP0.08□□□□□ -2.4
LRCH3-209ENST00000452660 FAM74A1Q5RGS3 127 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 SAPCD1Q5SSQ6 148 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 LYRM7Q5U5X0 104 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 C5orf17Q8NAS9 161 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 TERB2Q8NHR7 220 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 PYDC1Q8WXC3 89 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 AP3S1Q92572 193 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 CNBD2Q96M20 576 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 NPCDR1Q9BY65 106 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 FAM107BQ9H098 131 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 ST20Q9HBF5 79 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 MCUBQ9NWR8 336 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 ERG28Q9UKR5 140 aa0.08□□□□□ -2.4
LRCH3-209ENST00000452660 C14orf166Q9Y224 244 aaKnown RBP0.08□□□□□ -2.4
LRCH3-209ENST00000452660 IGLV5-48A0A075B6I7 105 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 TRAV23DV6A0A075B6W5 121 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 IGKV3D-7A0A0C4DH55 119 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 TRBV6-5A0A0K0K1A5 114 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 TRBV27A0A0K0K1C4 114 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 TEX49A0A1B0GTD5 131 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 LOC100130705A0A1B0GUX0 176 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 SERTM2A0A1B0GWG4 89 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 FAM25EA8MYX2 175 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 H3BUT2 72 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 K7ERS5 55 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 PDCD5O14737 125 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 PLA2G10O15496 165 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 ATP5HO75947 161 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 PPBPP02775 128 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 TRGC1P0CF51 173 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 LINC00158P58513 81 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 BATFQ16520 125 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 RNASE10Q5GAN6 216 aaKnown RBP0.07□□□□□ -2.4
LRCH3-209ENST00000452660 ANP32BQ92688 251 aaKnown RBP0.07□□□□□ -2.4
LRCH3-209ENST00000452660 FMC1Q96HJ9 113 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 SMIM8Q96KF7 97 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 SIKE1Q9BRV8 207 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 SMIM2Q9BVW6 85 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 VCX3BQ9H321 246 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 VCX3AQ9NNX9 186 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 ACOT13Q9NPJ3 140 aa0.07□□□□□ -2.4
LRCH3-209ENST00000452660 LSM5Q9Y4Y9 91 aaKnown RBP0.07□□□□□ -2.4
LRCH3-209ENST00000452660 TRAV1-2A0A0B4J238 106 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 TCRBV3S1A0A5B6 114 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 K7EQZ3 153 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 RGS5O15539 181 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 LYRM1O43325 122 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 NDUFS5O43920 106 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 SIX6O95475 246 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 LTAP01374 205 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 SMIM13P0DJ93 91 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 GCHFRP30047 84 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 SDC2P34741 201 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 NPC2P61916 151 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 UBE2G1P62253 170 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 MRPS36P82909 103 aaKnown RBP0.06□□□□□ -2.4
LRCH3-209ENST00000452660 JOSD1Q15040 202 aaPredicted RBP0.06□□□□□ -2.4
LRCH3-209ENST00000452660 PMVKQ15126 192 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 WHAMMP3Q1A5X7 153 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 CLEC2BQ92478 149 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 TMEM141Q96I45 108 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 PSMG3Q9BT73 122 aaPredicted RBP0.06□□□□□ -2.4
LRCH3-209ENST00000452660 GGACTQ9BVM4 153 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 CST9LQ9H4G1 147 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 NXT2Q9NPJ8 142 aaKnown RBP0.06□□□□□ -2.4
LRCH3-209ENST00000452660 SPANXA1Q9NS26 97 aa0.06□□□□□ -2.4
LRCH3-209ENST00000452660 TRBV20OR9-2A0A075B6H5 130 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 TRBV24-1A0A075B6N3 115 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 LOC110117498A0A087WWA1 95 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 A0A1W2PPV4 95 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 C9JQL5 133 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 C17orf112F2Z3M2 114 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 SFT2D2O95562 160 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 ATP6V1G2O95670 118 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 APOA1P02647 267 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 MT-ATP8P03928 68 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 S100A2P29034 98 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 IFI27P40305 119 aaPredicted RBP0.05□□□□□ -2.4
LRCH3-209ENST00000452660 AKR1C3P42330 323 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 RPL35P42766 123 aaKnown RBP0.05□□□□□ -2.4
LRCH3-209ENST00000452660 TAS2R45P59539 299 aa0.05□□□□□ -2.4
LRCH3-209ENST00000452660 HBG1P69891 147 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms