RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 Q9UF83 564 aa2.47□□□□□ -2.01
TOP2A-201ENST00000423485 A4D1N5 150 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 C3orf22Q8N5N4 141 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 ZNF625Q96I27 306 aaPredicted RBP2.46□□□□□ -2.02
TOP2A-201ENST00000423485 CSDC2Q9Y534 153 aaKnown RBP2.46□□□□□ -2.02
TOP2A-201ENST00000423485 SPINK8P0C7L1 97 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 CENPWQ5EE01 88 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 CELA1Q9UNI1 258 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 NDUFB4O95168 129 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 HIST1H4AP62805 103 aaKnown RBP2.46□□□□□ -2.02
TOP2A-201ENST00000423485 LINC00643Q86TS7 51 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 IGHV3OR16-9A0A0B4J2B5 98 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 I3L2K1 104 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 K7EIM0 57 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 LINC00205P59089 165 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 WT1-ASQ06250 92 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 KRTAP1-1Q07627 177 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 Q6JHZ5 121 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 KRTAP1-3Q8IUG1 177 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 AGPAT4-IT1Q9H0P7 198 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 SOCS3O14543 225 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 TSHBP01222 138 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 HAMPP81172 84 aa2.46□□□□□ -2.02
TOP2A-201ENST00000423485 LINC00167Q96N53 147 aa2.45□□□□□ -2.02
TOP2A-201ENST00000423485 C20orf78Q9BR46 151 aa2.45□□□□□ -2.02
TOP2A-201ENST00000423485 A0A1B0GW54 56 aa2.45□□□□□ -2.02
TOP2A-201ENST00000423485 MRPL55Q7Z7F7 128 aaKnown RBP2.45□□□□□ -2.02
TOP2A-201ENST00000423485 IGKV2-28A0A075B6P5 120 aa2.45□□□□□ -2.02
TOP2A-201ENST00000423485 IGKV2D-28P01615 120 aa2.45□□□□□ -2.02
TOP2A-201ENST00000423485 NPC2P61916 151 aa2.45□□□□□ -2.02
TOP2A-201ENST00000423485 SERP1Q9Y6X1 66 aa2.45□□□□□ -2.02
TOP2A-201ENST00000423485 BAALC-AS2P0C853 105 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 ATXN8Q156A1 80 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 ASB16-AS1Q495Z4 193 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 Q8N6K4 173 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 B5MCH6 92 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 LOC107984156A0A0G2JMH3 177 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 LOC100996750A0A140TA64 210 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 VPREB1P12018 145 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 COX7CP15954 63 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 ARL17AQ8IVW1 177 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 OCC1Q8TAD7 63 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 TRBV10-2A0A0K0K1G8 114 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 DNAH10OSP0CZ25 163 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 MP68P56378 58 aa2.44□□□□□ -2.02
TOP2A-201ENST00000423485 LINC01561Q8N1V8 128 aa2.43□□□□□ -2.02
TOP2A-201ENST00000423485 A0A087WYN8 130 aa2.43□□□□□ -2.02
TOP2A-201ENST00000423485 F8VRH5 84 aa2.43□□□□□ -2.02
TOP2A-201ENST00000423485 CFC1BP0CG36 223 aa2.43□□□□□ -2.02
TOP2A-201ENST00000423485 Q8N8P6 123 aa2.43□□□□□ -2.02
TOP2A-201ENST00000423485 Q8NBF4 154 aa2.43□□□□□ -2.02
TOP2A-201ENST00000423485 hDV103S1A0JD37 113 aa2.43□□□□□ -2.02
TOP2A-201ENST00000423485 Q86TA4 180 aa2.43□□□□□ -2.02
TOP2A-201ENST00000423485 RNASE7Q9H1E1 156 aaKnown RBP2.43□□□□□ -2.02
TOP2A-201ENST00000423485 PRR13Q9NZ81 148 aa2.43□□□□□ -2.02
TOP2A-201ENST00000423485 IGKCP01834 107 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 Q8NAQ8 132 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 USH2AO75445 5202 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 H3BUT2 72 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 KRTAP10-3P60369 221 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 JMJD7-PLA2G4BH0Y9G9 81 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 SPINK1P00995 79 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 XAGE1AQ9HD64 81 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 C11orf86A6NJI1 115 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 HRES1P13985 223 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 RNASE13Q5GAN3 156 aaKnown RBP2.42□□□□□ -2.02
TOP2A-201ENST00000423485 SCXQ7RTU7 201 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 V9GYY9 64 aa2.42□□□□□ -2.02
TOP2A-201ENST00000423485 TMEM223A0PJW6 202 aa2.41□□□□□ -2.02
TOP2A-201ENST00000423485 MOBPQ13875 183 aa2.41□□□□□ -2.02
TOP2A-201ENST00000423485 C9JAW5 83 aa2.41□□□□□ -2.02
TOP2A-201ENST00000423485 K7EN84 100 aa2.41□□□□□ -2.02
TOP2A-201ENST00000423485 NREPQ16612 68 aa2.41□□□□□ -2.02
TOP2A-201ENST00000423485 FAM104BQ5XKR9 115 aa2.41□□□□□ -2.02
TOP2A-201ENST00000423485 Q96NJ1 140 aa2.41□□□□□ -2.02
TOP2A-201ENST00000423485 SMIM26A0A096LP01 95 aa2.41□□□□□ -2.02
TOP2A-201ENST00000423485 TRBV7-6A0A0J9YX20 115 aa2.41□□□□□ -2.02
TOP2A-201ENST00000423485 HIGD1CA8MV81 97 aa2.41□□□□□ -2.02
TOP2A-201ENST00000423485 C2orf66Q6UXQ4 117 aa2.41□□□□□ -2.02
TOP2A-201ENST00000423485 GAS8-AS1O95177 125 aa2.4□□□□□ -2.02
TOP2A-201ENST00000423485 IGLV7-43P04211 117 aa2.4□□□□□ -2.03
TOP2A-201ENST00000423485 Q9BRP9 147 aa2.4□□□□□ -2.03
TOP2A-201ENST00000423485 C9orf92A6NGG3 77 aa2.4□□□□□ -2.03
TOP2A-201ENST00000423485 ACYP2P14621 99 aa2.4□□□□□ -2.03
TOP2A-201ENST00000423485 SSBP3-AS1Q7Z2R9 100 aa2.4□□□□□ -2.03
TOP2A-201ENST00000423485 SERP2Q8N6R1 65 aa2.4□□□□□ -2.03
TOP2A-201ENST00000423485 A0A096LNT2 108 aa2.4□□□□□ -2.03
TOP2A-201ENST00000423485 URB1-AS1Q96HZ7 61 aa2.4□□□□□ -2.03
TOP2A-201ENST00000423485 IGLV8-61A0A075B6I0 122 aa2.39□□□□□ -2.03
TOP2A-201ENST00000423485 FP248Q71RG6 208 aaPredicted RBP2.39□□□□□ -2.03
TOP2A-201ENST00000423485 UBL5Q9BZL1 73 aa2.39□□□□□ -2.03
TOP2A-201ENST00000423485 SND1-IT1Q9HBX3 110 aa2.39□□□□□ -2.03
TOP2A-201ENST00000423485 LOC100131303A0A0U1RQF7 123 aa2.39□□□□□ -2.03
TOP2A-201ENST00000423485 C14orf132Q9NPU4 83 aa2.39□□□□□ -2.03
TOP2A-201ENST00000423485 ORMDL1Q9P0S3 153 aa2.39□□□□□ -2.03
TOP2A-201ENST00000423485 LINC00959A0A1B0GUT2 108 aa2.39□□□□□ -2.03
TOP2A-201ENST00000423485 SOSTDC1Q6X4U4 206 aa2.39□□□□□ -2.03
TOP2A-201ENST00000423485 SCO2A0A1W2PP80 73 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms