RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 IMMP2LQ96T52 175 aa2.58□□□□□ -2
RNU4-39P-201ENST00000362455 GNB1LQ9BYB4 327 aa2.58□□□□□ -2
RNU4-39P-201ENST00000362455 MANBALQ9NQG1 85 aa2.58□□□□□ -2
RNU4-39P-201ENST00000362455 SPANXB1Q9NS25 103 aaPredicted RBP2.58□□□□□ -2
RNU4-39P-201ENST00000362455 HMSDA8MTL9 139 aa2.57□□□□□ -2
RNU4-39P-201ENST00000362455 NDUFA1O15239 70 aa2.57□□□□□ -2
RNU4-39P-201ENST00000362455 PDE6DO43924 150 aa2.57□□□□□ -2
RNU4-39P-201ENST00000362455 LINC00614P0C842 121 aa2.57□□□□□ -2
RNU4-39P-201ENST00000362455 UBE2BP63146 152 aa2.57□□□□□ -2
RNU4-39P-201ENST00000362455 ZNF345Q14585 488 aa2.57□□□□□ -2
RNU4-39P-201ENST00000362455 KRTAP13-1Q8IUC0 172 aa2.57□□□□□ -2
RNU4-39P-201ENST00000362455 TSKUQ8WUA8 353 aa2.57□□□□□ -2
RNU4-39P-201ENST00000362455 TIMM21Q9BVV7 248 aa2.57□□□□□ -2
RNU4-39P-201ENST00000362455 EIF5A2Q9GZV4 153 aaKnown RBP2.57□□□□□ -2
RNU4-39P-201ENST00000362455 TMEM191AQ9H0A3 160 aa2.57□□□□□ -2
RNU4-39P-201ENST00000362455 C22orf24Q9Y442 160 aa2.57□□□□□ -2
RNU4-39P-201ENST00000362455 LINC00862A6NCI5 91 aa2.56□□□□□ -2
RNU4-39P-201ENST00000362455 ZNF73O43830 326 aaPredicted RBP2.56□□□□□ -2
RNU4-39P-201ENST00000362455 CRYGAP11844 174 aa2.56□□□□□ -2
RNU4-39P-201ENST00000362455 MRPL51Q4U2R6 128 aaKnown RBP2.56□□□□□ -2
RNU4-39P-201ENST00000362455 SMIM15Q7Z3B0 74 aa2.56□□□□□ -2
RNU4-39P-201ENST00000362455 ATP5L2Q7Z4Y8 100 aa2.56□□□□□ -2
RNU4-39P-201ENST00000362455 XAGE1AQ9HD64 81 aa2.56□□□□□ -2
RNU4-39P-201ENST00000362455 TRBV30A0A0K0K1B3 111 aa2.55□□□□□ -2
RNU4-39P-201ENST00000362455 A0A1B0GUT8 65 aa2.55□□□□□ -2
RNU4-39P-201ENST00000362455 HIGD1CA8MV81 97 aa2.55□□□□□ -2
RNU4-39P-201ENST00000362455 BCE1O60756 84 aa2.55□□□□□ -2
RNU4-39P-201ENST00000362455 FCER1GP30273 86 aa2.55□□□□□ -2
RNU4-39P-201ENST00000362455 HERVK_113P63121 156 aa2.55□□□□□ -2
RNU4-39P-201ENST00000362455 MRPS36P82909 103 aaKnown RBP2.55□□□□□ -2
RNU4-39P-201ENST00000362455 ASB16-AS1Q495Z4 193 aa2.55□□□□□ -2
RNU4-39P-201ENST00000362455 FAM229BQ4G0N7 80 aa2.55□□□□□ -2
RNU4-39P-201ENST00000362455 PACRGQ96M98 296 aaPredicted RBP2.55□□□□□ -2
RNU4-39P-201ENST00000362455 C20orf166-AS1Q96NR2 134 aa2.55□□□□□ -2
RNU4-39P-201ENST00000362455 BIN3Q9NQY0 253 aa2.55□□□□□ -2
RNU4-39P-201ENST00000362455 ZNF727A8MUV8 499 aa2.54□□□□□ -2
RNU4-39P-201ENST00000362455 NUPR1O60356 82 aa2.54□□□□□ -2
RNU4-39P-201ENST00000362455 BATF3Q9NR55 127 aa2.54□□□□□ -2
RNU4-39P-201ENST00000362455 V9GYV3 84 aa2.54□□□□□ -2
RNU4-39P-201ENST00000362455 KANTRA0A1W2PQU2 76 aa2.53□□□□□ -2
RNU4-39P-201ENST00000362455 RPL28P46779 137 aaKnown RBP2.53□□□□□ -2
RNU4-39P-201ENST00000362455 HBBP68871 147 aa2.53□□□□□ -2
RNU4-39P-201ENST00000362455 MT1HP80294 61 aa2.53□□□□□ -2
RNU4-39P-201ENST00000362455 SPANXA1Q9NS26 97 aa2.53□□□□□ -2
RNU4-39P-201ENST00000362455 SSPOA2VEC9 5147 aa2.52□□□□□ -2.01
RNU4-39P-201ENST00000362455 NPYP01303 97 aa2.52□□□□□ -2.01
RNU4-39P-201ENST00000362455 C20orf78Q9BR46 151 aa2.52□□□□□ -2.01
RNU4-39P-201ENST00000362455 SMIM2Q9BVW6 85 aa2.52□□□□□ -2.01
RNU4-39P-201ENST00000362455 OSTCQ9NRP0 149 aa2.52□□□□□ -2.01
RNU4-39P-201ENST00000362455 TP73-AS1Q9UF72 201 aa2.52□□□□□ -2.01
RNU4-39P-201ENST00000362455 TGIF2-C20orf24A0A0A6YYL0 155 aa2.51□□□□□ -2.01
RNU4-39P-201ENST00000362455 PPP1R17O96001 155 aa2.51□□□□□ -2.01
RNU4-39P-201ENST00000362455 TSPEAR-AS2P59090 65 aa2.51□□□□□ -2.01
RNU4-39P-201ENST00000362455 Q8NDZ9 215 aa2.51□□□□□ -2.01
RNU4-39P-201ENST00000362455 PLEKHB2Q96CS7 222 aa2.51□□□□□ -2.01
RNU4-39P-201ENST00000362455 AMELXQ99217 191 aa2.51□□□□□ -2.01
RNU4-39P-201ENST00000362455 USH2AO75445 5202 aa2.51□□□□□ -2.01
RNU4-39P-201ENST00000362455 FLGP20930 4061 aaPredicted RBP2.51□□□□□ -2.01
RNU4-39P-201ENST00000362455 SMIM27A0A1W2PRY6 76 aa2.5□□□□□ -2.01
RNU4-39P-201ENST00000362455 D6R8Y8 96 aa2.5□□□□□ -2.01
RNU4-39P-201ENST00000362455 CKS2P33552 79 aa2.5□□□□□ -2.01
RNU4-39P-201ENST00000362455 CEBPGP53567 150 aa2.5□□□□□ -2.01
RNU4-39P-201ENST00000362455 CTAG1AP78358 180 aa2.5□□□□□ -2.01
RNU4-39P-201ENST00000362455 PRLHP81277 87 aa2.5□□□□□ -2.01
RNU4-39P-201ENST00000362455 Q8IZM0 81 aa2.5□□□□□ -2.01
RNU4-39P-201ENST00000362455 BORCS7Q96B45 105 aa2.5□□□□□ -2.01
RNU4-39P-201ENST00000362455 SMIM7Q9BQ49 75 aa2.5□□□□□ -2.01
RNU4-39P-201ENST00000362455 TOMM7Q9P0U1 55 aa2.5□□□□□ -2.01
RNU4-39P-201ENST00000362455 CDKN2A-AS1Q9UH64 79 aa2.5□□□□□ -2.01
RNU4-39P-201ENST00000362455 IGKV2D-26A0A0A0MRZ7 120 aa2.49□□□□□ -2.01
RNU4-39P-201ENST00000362455 IGIPA6NJ69 53 aa2.49□□□□□ -2.01
RNU4-39P-201ENST00000362455 TMEM238C9JI98 176 aa2.49□□□□□ -2.01
RNU4-39P-201ENST00000362455 M0R378 163 aa2.49□□□□□ -2.01
RNU4-39P-201ENST00000362455 SRP19P09132 144 aaKnown RBP2.49□□□□□ -2.01
RNU4-39P-201ENST00000362455 RGS21Q2M5E4 152 aa2.49□□□□□ -2.01
RNU4-39P-201ENST00000362455 FP248Q71RG6 208 aaPredicted RBP2.49□□□□□ -2.01
RNU4-39P-201ENST00000362455 DAND5Q8N907 189 aa2.49□□□□□ -2.01
RNU4-39P-201ENST00000362455 ZCCHC13Q8WW36 166 aaKnown RBP2.49□□□□□ -2.01
RNU4-39P-201ENST00000362455 TMEM141Q96I45 108 aa2.49□□□□□ -2.01
RNU4-39P-201ENST00000362455 NAT8BQ9UHF3 227 aa2.49□□□□□ -2.01
RNU4-39P-201ENST00000362455 F8VRH5 84 aa2.48□□□□□ -2.01
RNU4-39P-201ENST00000362455 IFI27P40305 119 aaPredicted RBP2.48□□□□□ -2.01
RNU4-39P-201ENST00000362455 CKS1BP61024 79 aa2.48□□□□□ -2.01
RNU4-39P-201ENST00000362455 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
RNU4-39P-201ENST00000362455 MRPL54Q6P161 138 aaKnown RBP2.48□□□□□ -2.01
RNU4-39P-201ENST00000362455 ALKAL2Q6UX46 152 aa2.48□□□□□ -2.01
RNU4-39P-201ENST00000362455 SLC51BQ86UW2 128 aa2.48□□□□□ -2.01
RNU4-39P-201ENST00000362455 TMEM126AQ9H061 195 aa2.48□□□□□ -2.01
RNU4-39P-201ENST00000362455 FCGBPQ9Y6R7 5405 aaPredicted RBP2.47□□□□□ -2.01
RNU4-39P-201ENST00000362455 RAB5BP61020 215 aa2.47□□□□□ -2.01
RNU4-39P-201ENST00000362455 JOSD1Q15040 202 aaPredicted RBP2.47□□□□□ -2.01
RNU4-39P-201ENST00000362455 PRELID3AQ96N28 172 aa2.47□□□□□ -2.01
RNU4-39P-201ENST00000362455 SPRR4Q96PI1 79 aa2.47□□□□□ -2.01
RNU4-39P-201ENST00000362455 MAP1LC3AQ9H492 121 aa2.47□□□□□ -2.01
RNU4-39P-201ENST00000362455 PPBPP02775 128 aa2.46□□□□□ -2.02
RNU4-39P-201ENST00000362455 ADCYAP1P18509 176 aa2.46□□□□□ -2.02
RNU4-39P-201ENST00000362455 SPAG11AQ6PDA7 123 aa2.46□□□□□ -2.02
RNU4-39P-201ENST00000362455 TCTE3Q8IZS6 198 aa2.46□□□□□ -2.02
RNU4-39P-201ENST00000362455 ADIRFQ15847 76 aa2.45□□□□□ -2.02
RNU4-39P-201ENST00000362455 Q8N8P6 123 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms