RNA–Protein interactions for RNA: ENST00000359524.7

RUNX2-201, Transcript of runt related transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene RUNX2, Length 5,390 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-201ENST00000359524 SPTBN5Q9NRC6 3674 aaKnown RBP11.45□□□□□ -0.58
RUNX2-201ENST00000359524 FN1P02751 2386 aaKnown RBP11.45□□□□□ -0.58
RUNX2-201ENST00000359524 ST20-AS1Q8NBB2 130 aa11.44□□□□□ -0.58
RUNX2-201ENST00000359524 FASNP49327 2511 aaKnown RBP11.44□□□□□ -0.58
RUNX2-201ENST00000359524 SPINT4Q6UDR6 99 aa11.44□□□□□ -0.58
RUNX2-201ENST00000359524 TM2D3Q9BRN9 247 aa11.43□□□□□ -0.58
RUNX2-201ENST00000359524 EYSQ5T1H1 3165 aa11.43□□□□□ -0.58
RUNX2-201ENST00000359524 Q8NAQ8 132 aa11.41□□□□□ -0.58
RUNX2-201ENST00000359524 KCNQ1DNQ9H478 68 aa11.41□□□□□ -0.58
RUNX2-201ENST00000359524 SSBP3-AS1Q7Z2R9 100 aa11.41□□□□□ -0.58
RUNX2-201ENST00000359524 AGRNO00468 2067 aa11.41□□□□□ -0.58
RUNX2-201ENST00000359524 ACANP16112 2415 aa11.4□□□□□ -0.58
RUNX2-201ENST00000359524 Q96NJ1 140 aa11.4□□□□□ -0.58
RUNX2-201ENST00000359524 COL6A3P12111 3177 aa11.4□□□□□ -0.58
RUNX2-201ENST00000359524 LINC01600Q96MT4 127 aa11.4□□□□□ -0.59
RUNX2-201ENST00000359524 COA5Q86WW8 74 aa11.39□□□□□ -0.59
RUNX2-201ENST00000359524 LINC00588Q9Y4M8 146 aa11.38□□□□□ -0.59
RUNX2-201ENST00000359524 LITAFQ99732 161 aa11.38□□□□□ -0.59
RUNX2-201ENST00000359524 WIPF1O43516 503 aa11.37□□□□□ -0.59
RUNX2-201ENST00000359524 AKAP13Q12802 2813 aa11.37□□□□□ -0.59
RUNX2-201ENST00000359524 CRIPTQ9P021 101 aa11.36□□□□□ -0.59
RUNX2-201ENST00000359524 IGLV1-50A0A075B6I6 118 aa11.36□□□□□ -0.59
RUNX2-201ENST00000359524 TNRC18O15417 2968 aaPredicted RBP11.36□□□□□ -0.59
RUNX2-201ENST00000359524 KLKP1Q107X0 134 aa11.35□□□□□ -0.59
RUNX2-201ENST00000359524 CELSR3Q9NYQ7 3312 aa11.34□□□□□ -0.59
RUNX2-201ENST00000359524 PLA2G2DQ9UNK4 145 aa11.33□□□□□ -0.6
RUNX2-201ENST00000359524 PRR15Q8IV56 129 aa11.33□□□□□ -0.6
RUNX2-201ENST00000359524 LINC00528Q8N1L1 170 aa11.33□□□□□ -0.6
RUNX2-201ENST00000359524 WWC2-AS2Q96NR7 200 aa11.33□□□□□ -0.6
RUNX2-201ENST00000359524 C8orf17Q9NRJ1 99 aa11.31□□□□□ -0.6
RUNX2-201ENST00000359524 K7EQZ3 153 aa11.3□□□□□ -0.6
RUNX2-201ENST00000359524 MIR22HGQ0VDD5 57 aa11.28□□□□□ -0.6
RUNX2-201ENST00000359524 A0A1B0GVX0 72 aa11.28□□□□□ -0.6
RUNX2-201ENST00000359524 TLX1NBP0CAT3 122 aa11.27□□□□□ -0.61
RUNX2-201ENST00000359524 SPEGQ15772 3267 aa11.26□□□□□ -0.61
RUNX2-201ENST00000359524 A8MUN3 132 aa11.26□□□□□ -0.61
RUNX2-201ENST00000359524 PRR34Q9NV39 138 aa11.24□□□□□ -0.61
RUNX2-201ENST00000359524 KRTAP24-1Q3LI83 254 aa11.24□□□□□ -0.61
RUNX2-201ENST00000359524 IGFL1Q6UW32 110 aa11.23□□□□□ -0.61
RUNX2-201ENST00000359524 DSPP15924 2871 aaKnown RBP11.23□□□□□ -0.61
RUNX2-201ENST00000359524 CHTF8P0CG12 524 aa11.23□□□□□ -0.61
RUNX2-201ENST00000359524 SPANXA2-OT1Q8N9U9 137 aa11.23□□□□□ -0.61
RUNX2-201ENST00000359524 ZNF861PO60384 105 aa11.23□□□□□ -0.61
RUNX2-201ENST00000359524 CD164Q04900 197 aa11.22□□□□□ -0.61
RUNX2-201ENST00000359524 LINC00304Q8N9R0 145 aa11.22□□□□□ -0.61
RUNX2-201ENST00000359524 CENPEQ02224 2701 aa11.22□□□□□ -0.61
RUNX2-201ENST00000359524 IGLV8-61A0A075B6I0 122 aa11.22□□□□□ -0.61
RUNX2-201ENST00000359524 LINC00336Q6ZUF6 198 aa11.21□□□□□ -0.61
RUNX2-201ENST00000359524 FRYLO94915 3013 aa11.21□□□□□ -0.61
RUNX2-201ENST00000359524 J3QL48 77 aa11.18□□□□□ -0.62
RUNX2-201ENST00000359524 COX6B2Q6YFQ2 88 aa11.17□□□□□ -0.62
RUNX2-201ENST00000359524 CSNK1G2-AS1Q8NCQ2 148 aa11.17□□□□□ -0.62
RUNX2-201ENST00000359524 A0A096LNT2 108 aa11.16□□□□□ -0.62
RUNX2-201ENST00000359524 LCA10Q71F78 164 aa11.16□□□□□ -0.62
RUNX2-201ENST00000359524 C15orf56Q8N910 161 aa11.15□□□□□ -0.62
RUNX2-201ENST00000359524 LINC00612Q8N6U2 182 aa11.14□□□□□ -0.63
RUNX2-201ENST00000359524 HECTD1Q9ULT8 2610 aa11.14□□□□□ -0.63
RUNX2-201ENST00000359524 APLNQ9ULZ1 77 aa11.13□□□□□ -0.63
RUNX2-201ENST00000359524 RBM12B-AS1Q9P1G2 102 aa11.13□□□□□ -0.63
RUNX2-201ENST00000359524 KTN1-AS1Q86SY8 53 aa11.13□□□□□ -0.63
RUNX2-201ENST00000359524 DSCR10P59022 87 aa11.12□□□□□ -0.63
RUNX2-201ENST00000359524 Q8N377 158 aa11.12□□□□□ -0.63
RUNX2-201ENST00000359524 CDC42SE1Q9NRR8 79 aa11.12□□□□□ -0.63
RUNX2-201ENST00000359524 C19orf73Q9NVV2 129 aa11.12□□□□□ -0.63
RUNX2-201ENST00000359524 FAM168BA1KXE4 195 aa11.11□□□□□ -0.63
RUNX2-201ENST00000359524 C9orf163Q8N9P6 203 aa11.11□□□□□ -0.63
RUNX2-201ENST00000359524 H7BZZ5 65 aa11.08□□□□□ -0.64
RUNX2-201ENST00000359524 BOD1L1Q8NFC6 3051 aa11.08□□□□□ -0.64
RUNX2-201ENST00000359524 FLNBO75369 2602 aaKnown RBP11.07□□□□□ -0.64
RUNX2-201ENST00000359524 MUC4Q99102 2169 aa11.06□□□□□ -0.64
RUNX2-201ENST00000359524 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
RUNX2-201ENST00000359524 CNBPP62633 177 aaKnown RBP11.05□□□□□ -0.64
RUNX2-201ENST00000359524 FRYQ5TBA9 3013 aa11.05□□□□□ -0.64
RUNX2-201ENST00000359524 FREM2Q5SZK8 3169 aa11.05□□□□□ -0.64
RUNX2-201ENST00000359524 MYO15AQ9UKN7 3530 aa11.04□□□□□ -0.64
RUNX2-201ENST00000359524 A0A087WTM6 91 aa11.04□□□□□ -0.64
RUNX2-201ENST00000359524 IGLV5-37A0A075B6J1 123 aa11.04□□□□□ -0.64
RUNX2-201ENST00000359524 C9orf129Q5T035 196 aaKnown RBP11.04□□□□□ -0.64
RUNX2-201ENST00000359524 IGLV7-43P04211 117 aa11.04□□□□□ -0.64
RUNX2-201ENST00000359524 OBSCN-AS1Q96MR7 158 aa11.03□□□□□ -0.64
RUNX2-201ENST00000359524 FLNAP21333 2647 aaKnown RBP11.03□□□□□ -0.64
RUNX2-201ENST00000359524 SPRR4Q96PI1 79 aa11.01□□□□□ -0.65
RUNX2-201ENST00000359524 CFAP46Q8IYW2 2715 aa11□□□□□ -0.65
RUNX2-201ENST00000359524 ITPR3Q14573 2671 aa10.99□□□□□ -0.65
RUNX2-201ENST00000359524 F8P00451 2351 aa10.99□□□□□ -0.65
RUNX2-201ENST00000359524 USP24Q9UPU5 2620 aa10.98□□□□□ -0.65
RUNX2-201ENST00000359524 MAP1AP78559 2803 aaPredicted RBP10.98□□□□□ -0.65
RUNX2-201ENST00000359524 DMXL2Q8TDJ6 3036 aa10.98□□□□□ -0.65
RUNX2-201ENST00000359524 IGLV5-48A0A075B6I7 105 aa10.97□□□□□ -0.65
RUNX2-201ENST00000359524 LUZP6Q538Z0 58 aa10.97□□□□□ -0.65
RUNX2-201ENST00000359524 KRTAP1-3Q8IUG1 177 aa10.96□□□□□ -0.65
RUNX2-201ENST00000359524 USP34Q70CQ2 3546 aa10.96□□□□□ -0.65
RUNX2-201ENST00000359524 NBEAQ8NFP9 2946 aa10.95□□□□□ -0.66
RUNX2-201ENST00000359524 K7EIL1 84 aa10.95□□□□□ -0.66
RUNX2-201ENST00000359524 ZNF575Q86XF7 245 aa10.94□□□□□ -0.66
RUNX2-201ENST00000359524 IGSF10Q6WRI0 2623 aa10.93□□□□□ -0.66
RUNX2-201ENST00000359524 HELZ2Q9BYK8 2649 aaKnown RBP10.92□□□□□ -0.66
RUNX2-201ENST00000359524 DMXL1Q9Y485 3027 aa10.92□□□□□ -0.66
RUNX2-201ENST00000359524 A0A1W2PNM2 257 aa10.91□□□□□ -0.66
RUNX2-201ENST00000359524 ADGRG4Q8IZF6 3080 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms