RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 U3KQA8 63 aa2.48□□□□□ -2.01
SYNE1-201ENST00000341594 ST20-AS1Q8NBB2 130 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 Q9BRP9 147 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 H3BNG1 76 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 IGKV2-28A0A075B6P5 120 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 IGKV2D-28P01615 120 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 FHL2Q14192 279 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 A8MU10 97 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 FAM218AQ96MZ4 157 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 GVQW2A0A096LPI5 108 aaPredicted RBP2.47□□□□□ -2.01
SYNE1-201ENST00000341594 PLA2G2CQ5R387 149 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 FAM229AH3BQW9 127 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 ZNF575Q86XF7 245 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 C11orf45Q8TAV5 145 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 A0A0D9SG42 100 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 KRTAP10-9P60411 292 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 LMO4P61968 165 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 LCE6AA0A183 80 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 IGLV7-46A0A075B6I9 117 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 PLA2G2DQ9UNK4 145 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 CDC42SE1Q9NRR8 79 aa2.47□□□□□ -2.01
SYNE1-201ENST00000341594 LINC00846Q9NV44 126 aa2.46□□□□□ -2.01
SYNE1-201ENST00000341594 LITAFQ99732 161 aa2.46□□□□□ -2.02
SYNE1-201ENST00000341594 LINC00242Q5T6M2 205 aa2.46□□□□□ -2.02
SYNE1-201ENST00000341594 BBC3Q96PG8 261 aaPredicted RBP2.46□□□□□ -2.02
SYNE1-201ENST00000341594 C1orf134Q5TEV5 83 aa2.46□□□□□ -2.02
SYNE1-201ENST00000341594 CCL19Q99731 98 aa2.46□□□□□ -2.02
SYNE1-201ENST00000341594 IGLV9-49A0A0B4J1Y8 123 aa2.46□□□□□ -2.02
SYNE1-201ENST00000341594 TRIOO75962 3097 aa2.46□□□□□ -2.02
SYNE1-201ENST00000341594 DMAC1Q96GE9 116 aa2.46□□□□□ -2.02
SYNE1-201ENST00000341594 CRYBG3Q68DQ2 2970 aa2.46□□□□□ -2.02
SYNE1-201ENST00000341594 LINC00575Q6W349 94 aa2.46□□□□□ -2.02
SYNE1-201ENST00000341594 ZZEF1O43149 2961 aa2.45□□□□□ -2.02
SYNE1-201ENST00000341594 REG3GQ6UW15 175 aa2.45□□□□□ -2.02
SYNE1-201ENST00000341594 IGLV4-60A0A075B6I1 120 aa2.45□□□□□ -2.02
SYNE1-201ENST00000341594 LINC00313P59037 77 aa2.45□□□□□ -2.02
SYNE1-201ENST00000341594 LINC01356Q8N9X3 169 aa2.45□□□□□ -2.02
SYNE1-201ENST00000341594 CDC42SE2Q9NRR3 84 aa2.45□□□□□ -2.02
SYNE1-201ENST00000341594 C16orf74Q96GX8 76 aa2.45□□□□□ -2.02
SYNE1-201ENST00000341594 Q6ZTC4 211 aa2.45□□□□□ -2.02
SYNE1-201ENST00000341594 PRLHP81277 87 aa2.45□□□□□ -2.02
SYNE1-201ENST00000341594 PSCAO43653 123 aa2.45□□□□□ -2.02
SYNE1-201ENST00000341594 MIR22HGQ0VDD5 57 aa2.45□□□□□ -2.02
SYNE1-201ENST00000341594 LINC00959A0A1B0GUT2 108 aa2.44□□□□□ -2.02
SYNE1-201ENST00000341594 EGFEM1PQ0D2K5 195 aa2.44□□□□□ -2.02
SYNE1-201ENST00000341594 DCHS2Q6V1P9 2916 aa2.44□□□□□ -2.02
SYNE1-201ENST00000341594 IGLV6-57P01721 117 aa2.44□□□□□ -2.02
SYNE1-201ENST00000341594 KCNQ1DNQ9H478 68 aa2.44□□□□□ -2.02
SYNE1-201ENST00000341594 CCL18P55774 89 aa2.44□□□□□ -2.02
SYNE1-201ENST00000341594 PRO3102Q9H379 93 aa2.44□□□□□ -2.02
SYNE1-201ENST00000341594 CHTF8P0CG12 524 aa2.44□□□□□ -2.02
SYNE1-201ENST00000341594 Q6ZQT0 140 aa2.43□□□□□ -2.02
SYNE1-201ENST00000341594 CFAP54Q96N23 3096 aa2.43□□□□□ -2.02
SYNE1-201ENST00000341594 SYCNQ0VAF6 134 aa2.43□□□□□ -2.02
SYNE1-201ENST00000341594 C9orf92A6NGG3 77 aa2.43□□□□□ -2.02
SYNE1-201ENST00000341594 C6orf48Q9UBA6 75 aa2.43□□□□□ -2.02
SYNE1-201ENST00000341594 UBE2DNLQ8IWF7 75 aa2.43□□□□□ -2.02
SYNE1-201ENST00000341594 ASH1LQ9NR48 2969 aaKnown RBP2.43□□□□□ -2.02
SYNE1-201ENST00000341594 ADM2Q7Z4H4 148 aa2.43□□□□□ -2.02
SYNE1-201ENST00000341594 C11orf72Q8NBR9 251 aa2.43□□□□□ -2.02
SYNE1-201ENST00000341594 DEFB135Q30KP9 77 aa2.42□□□□□ -2.02
SYNE1-201ENST00000341594 SMIM1B2RUZ4 78 aa2.42□□□□□ -2.02
SYNE1-201ENST00000341594 IGLV5-48A0A075B6I7 105 aa2.42□□□□□ -2.02
SYNE1-201ENST00000341594 FAM168BA1KXE4 195 aa2.42□□□□□ -2.02
SYNE1-201ENST00000341594 CHCHD10Q8WYQ3 142 aaPredicted RBP2.42□□□□□ -2.02
SYNE1-201ENST00000341594 Q5XG85 94 aa2.42□□□□□ -2.02
SYNE1-201ENST00000341594 LINC00588Q9Y4M8 146 aa2.42□□□□□ -2.02
SYNE1-201ENST00000341594 FAM229BQ4G0N7 80 aa2.42□□□□□ -2.02
SYNE1-201ENST00000341594 IGLV7-43P04211 117 aa2.42□□□□□ -2.02
SYNE1-201ENST00000341594 CNBPP62633 177 aaKnown RBP2.42□□□□□ -2.02
SYNE1-201ENST00000341594 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.42□□□□□ -2.02
SYNE1-201ENST00000341594 C14orf177Q52M58 125 aa2.42□□□□□ -2.02
SYNE1-201ENST00000341594 MEGF8Q7Z7M0 2845 aa2.42□□□□□ -2.02
SYNE1-201ENST00000341594 LINC01006Q8NI28 216 aa2.42□□□□□ -2.02
SYNE1-201ENST00000341594 IGLV1-50A0A075B6I6 118 aa2.41□□□□□ -2.02
SYNE1-201ENST00000341594 FP248Q71RG6 208 aaPredicted RBP2.41□□□□□ -2.02
SYNE1-201ENST00000341594 SPRR4Q96PI1 79 aa2.41□□□□□ -2.02
SYNE1-201ENST00000341594 ZNF702PQ9H963 129 aa2.41□□□□□ -2.02
SYNE1-201ENST00000341594 PRO0255Q9UI72 69 aa2.41□□□□□ -2.02
SYNE1-201ENST00000341594 SMIM29Q86T20 159 aa2.41□□□□□ -2.02
SYNE1-201ENST00000341594 DEFB131BA0A096LNP1 70 aa2.41□□□□□ -2.02
SYNE1-201ENST00000341594 C1orf137Q5JT78 98 aa2.41□□□□□ -2.02
SYNE1-201ENST00000341594 KPRPQ5T749 579 aaPredicted RBP2.41□□□□□ -2.02
SYNE1-201ENST00000341594 CSNK1G2-AS1Q8NCQ2 148 aa2.4□□□□□ -2.03
SYNE1-201ENST00000341594 CASC10Q5T4H9 136 aa2.4□□□□□ -2.03
SYNE1-201ENST00000341594 FAM215AQ9Y5M1 114 aa2.4□□□□□ -2.03
SYNE1-201ENST00000341594 CIRBP-AS1Q8TBR5 109 aa2.4□□□□□ -2.03
SYNE1-201ENST00000341594 K7EIL1 84 aa2.4□□□□□ -2.03
SYNE1-201ENST00000341594 NUPR2A6NF83 97 aa2.4□□□□□ -2.03
SYNE1-201ENST00000341594 COA5Q86WW8 74 aa2.4□□□□□ -2.03
SYNE1-201ENST00000341594 CYSRT1A8MQ03 144 aa2.4□□□□□ -2.03
SYNE1-201ENST00000341594 Q6ZRP5 223 aa2.4□□□□□ -2.03
SYNE1-201ENST00000341594 OXTP01178 125 aa2.39□□□□□ -2.03
SYNE1-201ENST00000341594 RTL8CO15255 209 aa2.39□□□□□ -2.03
SYNE1-201ENST00000341594 LELP1Q5T871 98 aa2.38□□□□□ -2.03
SYNE1-201ENST00000341594 LINC00337Q8N6G1 96 aa2.38□□□□□ -2.03
SYNE1-201ENST00000341594 C8orf17Q9NRJ1 99 aa2.38□□□□□ -2.03
SYNE1-201ENST00000341594 TLX1NBP0CAT3 122 aa2.38□□□□□ -2.03
SYNE1-201ENST00000341594 Q8N1X5 172 aa2.37□□□□□ -2.03
SYNE1-201ENST00000341594 CSAG1Q6PB30 78 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms