RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 LYPD5Q6UWN5 251 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 TOMM7Q9P0U1 55 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 TRBV20-1A0A075B6N2 111 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 LOC107984156A0A0G2JMH3 177 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 XCL1P47992 114 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 C5orf38Q86SI9 138 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 ARL17AQ8IVW1 177 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 LINC00269Q8N2A0 174 aa2.35□□□□□ -2.03
SMCO3-201ENST00000316048 ZNF625Q96I27 306 aaPredicted RBP2.35□□□□□ -2.03
SMCO3-201ENST00000316048 SETD2Q9BYW2 2564 aaPredicted RBP2.34□□□□□ -2.03
SMCO3-201ENST00000316048 IGHV3-33P01772 117 aa2.34□□□□□ -2.03
SMCO3-201ENST00000316048 COX6CP09669 75 aa2.34□□□□□ -2.03
SMCO3-201ENST00000316048 KPRPQ5T749 579 aaPredicted RBP2.34□□□□□ -2.03
SMCO3-201ENST00000316048 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
SMCO3-201ENST00000316048 Q6ZRU5 148 aa2.34□□□□□ -2.03
SMCO3-201ENST00000316048 LINC00308Q8TCZ7 52 aa2.34□□□□□ -2.03
SMCO3-201ENST00000316048 TEP1Q99973 2627 aaKnown RBP2.33□□□□□ -2.04
SMCO3-201ENST00000316048 DEFB131BA0A096LNP1 70 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 IBA57-AS1B1ANH7 110 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 H3BMG7 143 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 H7C2G1 150 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 COX7A2LO14548 114 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 NDUFC2O95298 119 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 LINC00158P58513 81 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 NPC2P61916 151 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 Q8IZM0 81 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 F8P00451 2351 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 TRAV10A0A0B4J240 114 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 TRBV30A0A0K0K1B3 111 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 CRPP02741 224 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 CLPSL2Q6UWE3 100 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 DAND5Q8N907 189 aa2.33□□□□□ -2.04
SMCO3-201ENST00000316048 ZNF706Q9Y5V0 76 aaPredicted RBP2.33□□□□□ -2.04
SMCO3-201ENST00000316048 IGLV10-54A0A075B6I4 117 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 FAM236AA0A1B0GUQ0 79 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 FAM236BA0A1B0GV22 79 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 COX17Q14061 63 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 MIR7-3HGQ8N6C7 128 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 ANKRD29Q8N6D5 301 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 TM2D3Q9BRN9 247 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 KLK5Q9Y337 293 aaPredicted RBP2.32□□□□□ -2.04
SMCO3-201ENST00000316048 TRAV13-2A0A0B4J235 113 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 J3QR89 54 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 K7EIL1 84 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 TCL1BO95988 128 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 ATXN8Q156A1 80 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 ESRGQ1W209 222 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 ENHOQ6UWT2 76 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 SPANXA2-OT1Q8N9U9 137 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 C15orf53Q8NAA6 179 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 UBE2WQ96B02 151 aa2.32□□□□□ -2.04
SMCO3-201ENST00000316048 JMJD1CQ15652 2540 aa2.31□□□□□ -2.04
SMCO3-201ENST00000316048 PRB2P02812 416 aaPredicted RBP2.31□□□□□ -2.04
SMCO3-201ENST00000316048 WFDC2Q14508 124 aa2.31□□□□□ -2.04
SMCO3-201ENST00000316048 C3orf22Q8N5N4 141 aa2.31□□□□□ -2.04
SMCO3-201ENST00000316048 MUC7Q8TAX7 377 aa2.31□□□□□ -2.04
SMCO3-201ENST00000316048 ATRQ13535 2644 aa2.31□□□□□ -2.04
SMCO3-201ENST00000316048 IGKV2-28A0A075B6P5 120 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 LRCOL1A6NCL2 159 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 IGKV2D-28P01615 120 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 CCL18P55774 89 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 C2orf82Q6UX34 121 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 SOSTDC1Q6X4U4 206 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 WFDC10BQ8IUB3 73 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 TENM1Q9UKZ4 2725 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 A8MUU9 505 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 INAFM2P0DMQ5 153 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 SPAG11BQ08648 103 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 ETDBQ3ZM63 59 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 LINC01556Q5JQF7 62 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 PRO0461Q9UI25 63 aa2.3□□□□□ -2.04
SMCO3-201ENST00000316048 NIPBLQ6KC79 2804 aaeCLIP2.3□□□□□ -2.04
SMCO3-201ENST00000316048 H0YGX0 51 aa2.29□□□□□ -2.04
SMCO3-201ENST00000316048 SLC25A20O43772 301 aa2.29□□□□□ -2.04
SMCO3-201ENST00000316048 RPL28P46779 137 aaKnown RBP2.29□□□□□ -2.04
SMCO3-201ENST00000316048 FLNBO75369 2602 aaKnown RBP2.29□□□□□ -2.04
SMCO3-201ENST00000316048 GVQW2A0A096LPI5 108 aaPredicted RBP2.29□□□□□ -2.04
SMCO3-201ENST00000316048 TRBV10-2A0A0K0K1G8 114 aa2.29□□□□□ -2.04
SMCO3-201ENST00000316048 LST1O00453 97 aa2.29□□□□□ -2.04
SMCO3-201ENST00000316048 SNCGO76070 127 aa2.29□□□□□ -2.04
SMCO3-201ENST00000316048 UNQ6190/PRO20217Q6UXQ8 127 aa2.29□□□□□ -2.04
SMCO3-201ENST00000316048 TEN1Q86WV5 123 aa2.29□□□□□ -2.04
SMCO3-201ENST00000316048 PRR15Q8IV56 129 aa2.29□□□□□ -2.04
SMCO3-201ENST00000316048 RMI2Q96E14 147 aa2.29□□□□□ -2.04
SMCO3-201ENST00000316048 DPH3Q96FX2 82 aa2.29□□□□□ -2.04
SMCO3-201ENST00000316048 VWFP04275 2813 aa2.28□□□□□ -2.04
SMCO3-201ENST00000316048 H3BT86 120 aa2.28□□□□□ -2.04
SMCO3-201ENST00000316048 TRACP01848 142 aa2.28□□□□□ -2.04
SMCO3-201ENST00000316048 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
SMCO3-201ENST00000316048 ST20-AS1Q8NBB2 130 aa2.28□□□□□ -2.04
SMCO3-201ENST00000316048 PPDPFLQ8WWR9 84 aa2.28□□□□□ -2.04
SMCO3-201ENST00000316048 CLEC2BQ92478 149 aa2.28□□□□□ -2.04
SMCO3-201ENST00000316048 LINC01600Q96MT4 127 aa2.28□□□□□ -2.04
SMCO3-201ENST00000316048 B9D2Q9BPU9 175 aa2.28□□□□□ -2.04
SMCO3-201ENST00000316048 LINC00588Q9Y4M8 146 aa2.28□□□□□ -2.04
SMCO3-201ENST00000316048 FBN1P35555 2871 aaKnown RBP2.28□□□□□ -2.04
SMCO3-201ENST00000316048 A8MUN3 132 aa2.27□□□□□ -2.05
SMCO3-201ENST00000316048 LINC00313P59037 77 aa2.27□□□□□ -2.05
SMCO3-201ENST00000316048 C9orf116Q5BN46 136 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms