RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 Q9BRP9 147 aa7.09□□□□□ -1.27
SCFD1-201ENST00000311943 SPANXB1Q9NS25 103 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-201ENST00000311943 S100A7L2Q5SY68 101 aa7.08□□□□□ -1.28
SCFD1-201ENST00000311943 C3orf22Q8N5N4 141 aa7.08□□□□□ -1.28
SCFD1-201ENST00000311943 B5MCH6 92 aa7.08□□□□□ -1.28
SCFD1-201ENST00000311943 PRYO14603 147 aa7.08□□□□□ -1.28
SCFD1-201ENST00000311943 TIMM17BO60830 172 aa7.08□□□□□ -1.28
SCFD1-201ENST00000311943 NDUFC2O95298 119 aa7.08□□□□□ -1.28
SCFD1-201ENST00000311943 TSPAN13O95857 204 aa7.08□□□□□ -1.28
SCFD1-201ENST00000311943 TRBV10-2A0A0K0K1G8 114 aa7.07□□□□□ -1.28
SCFD1-201ENST00000311943 OR13C6PQ8NH95 151 aa7.07□□□□□ -1.28
SCFD1-201ENST00000311943 ETDCA0A1B0GVM5 59 aa7.06□□□□□ -1.28
SCFD1-201ENST00000311943 SPANXCQ9NY87 97 aa7.06□□□□□ -1.28
SCFD1-201ENST00000311943 TRAV23DV6A0A075B6W5 121 aa7.06□□□□□ -1.28
SCFD1-201ENST00000311943 SPANXDQ9BXN6 97 aa7.06□□□□□ -1.28
SCFD1-201ENST00000311943 ST20-AS1Q8NBB2 130 aa7.05□□□□□ -1.28
SCFD1-201ENST00000311943 C14orf144Q96I85 54 aa7.05□□□□□ -1.28
SCFD1-201ENST00000311943 SPRR4Q96PI1 79 aa7.05□□□□□ -1.28
SCFD1-201ENST00000311943 PAM16Q9Y3D7 125 aa7.05□□□□□ -1.28
SCFD1-201ENST00000311943 CRYGAP11844 174 aa7.04□□□□□ -1.28
SCFD1-201ENST00000311943 TYMSOSQ8TAI1 123 aa7.04□□□□□ -1.28
SCFD1-201ENST00000311943 ZNF73O43830 326 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-201ENST00000311943 TMEM238LA0A1B0GVL6 79 aa7.03□□□□□ -1.28
SCFD1-201ENST00000311943 Q6ZRX8 168 aa7.03□□□□□ -1.28
SCFD1-201ENST00000311943 GAGE2AQ6NT46 116 aa7.02□□□□□ -1.29
SCFD1-201ENST00000311943 C12orf57Q99622 126 aa7.02□□□□□ -1.29
SCFD1-201ENST00000311943 HSBP1L1C9JCN9 74 aa7.01□□□□□ -1.29
SCFD1-201ENST00000311943 RNF213Q63HN8 5207 aa7.01□□□□□ -1.29
SCFD1-201ENST00000311943 C6orf99Q4VX62 202 aa7.01□□□□□ -1.29
SCFD1-201ENST00000311943 PYY3Q5JQD4 70 aa7.01□□□□□ -1.29
SCFD1-201ENST00000311943 RETNLBQ9BQ08 111 aa7.01□□□□□ -1.29
SCFD1-201ENST00000311943 A6NDN8 102 aa7□□□□□ -1.29
SCFD1-201ENST00000311943 JOSD1Q15040 202 aaPredicted RBP7□□□□□ -1.29
SCFD1-201ENST00000311943 SPATA45Q537H7 98 aa7□□□□□ -1.29
SCFD1-201ENST00000311943 A4D1N5 150 aa6.99□□□□□ -1.29
SCFD1-201ENST00000311943 COX8AP10176 69 aa6.99□□□□□ -1.29
SCFD1-201ENST00000311943 RPL13AP40429 203 aaKnown RBP6.99□□□□□ -1.29
SCFD1-201ENST00000311943 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
SCFD1-201ENST00000311943 C2orf91Q6ZV80 131 aa6.97□□□□□ -1.29
SCFD1-201ENST00000311943 IFITM1P13164 125 aa6.96□□□□□ -1.29
SCFD1-201ENST00000311943 AKR1D1P51857 326 aa6.96□□□□□ -1.29
SCFD1-201ENST00000311943 FAM229BQ4G0N7 80 aa6.96□□□□□ -1.29
SCFD1-201ENST00000311943 SMIM11BQ8TCY0 68 aa6.96□□□□□ -1.29
SCFD1-201ENST00000311943 S100A12P80511 92 aa6.96□□□□□ -1.3
SCFD1-201ENST00000311943 LINC00518Q8N0U6 118 aa6.95□□□□□ -1.3
SCFD1-201ENST00000311943 VAMP8Q9BV40 100 aa6.95□□□□□ -1.3
SCFD1-201ENST00000311943 PRR4Q16378 134 aa6.94□□□□□ -1.3
SCFD1-201ENST00000311943 LINC00304Q8N9R0 145 aa6.94□□□□□ -1.3
SCFD1-201ENST00000311943 ELOF1P60002 83 aaKnown RBP6.94□□□□□ -1.3
SCFD1-201ENST00000311943 MOBPQ13875 183 aa6.94□□□□□ -1.3
SCFD1-201ENST00000311943 LINC00483Q53H64 154 aa6.94□□□□□ -1.3
SCFD1-201ENST00000311943 Q6ZVH6 145 aa6.94□□□□□ -1.3
SCFD1-201ENST00000311943 Q8NBF4 154 aa6.94□□□□□ -1.3
SCFD1-201ENST00000311943 HIST1H4GQ99525 98 aa6.94□□□□□ -1.3
SCFD1-201ENST00000311943 A0A0G2JQZ4 141 aa6.93□□□□□ -1.3
SCFD1-201ENST00000311943 COX7BP24311 80 aa6.93□□□□□ -1.3
SCFD1-201ENST00000311943 DEFB105AQ8NG35 78 aa6.93□□□□□ -1.3
SCFD1-201ENST00000311943 ZNF706Q9Y5V0 76 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-201ENST00000311943 DLEU1O43261 78 aa6.91□□□□□ -1.3
SCFD1-201ENST00000311943 H7C2G1 150 aa6.9□□□□□ -1.3
SCFD1-201ENST00000311943 HINT1P49773 126 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-201ENST00000311943 Q1RN00 199 aa6.9□□□□□ -1.3
SCFD1-201ENST00000311943 CFC1BP0CG36 223 aa6.89□□□□□ -1.31
SCFD1-201ENST00000311943 CFC1P0CG37 223 aa6.89□□□□□ -1.31
SCFD1-201ENST00000311943 SLC25A34Q6PIV7 304 aa6.89□□□□□ -1.31
SCFD1-201ENST00000311943 TRAV13-2A0A0B4J235 113 aa6.89□□□□□ -1.31
SCFD1-201ENST00000311943 LINC01547P58512 204 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-201ENST00000311943 MUC2Q02817 5179 aa6.88□□□□□ -1.31
SCFD1-201ENST00000311943 FXYD2P54710 66 aa6.88□□□□□ -1.31
SCFD1-201ENST00000311943 C9orf153Q5TBE3 101 aa6.88□□□□□ -1.31
SCFD1-201ENST00000311943 SMCPP49901 116 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-201ENST00000311943 HRCT1Q6UXD1 115 aa6.87□□□□□ -1.31
SCFD1-201ENST00000311943 COPS9Q8WXC6 57 aa6.87□□□□□ -1.31
SCFD1-201ENST00000311943 SMIM29Q86T20 159 aa6.86□□□□□ -1.31
SCFD1-201ENST00000311943 DHRS4-AS1Q9P1J3 65 aa6.86□□□□□ -1.31
SCFD1-201ENST00000311943 A0A1B0GWB2 263 aa6.85□□□□□ -1.31
SCFD1-201ENST00000311943 TAL2Q16559 108 aa6.85□□□□□ -1.31
SCFD1-201ENST00000311943 HIGD1BQ9P298 99 aa6.85□□□□□ -1.31
SCFD1-201ENST00000311943 K7ERJ3 54 aa6.84□□□□□ -1.31
SCFD1-201ENST00000311943 SPRR1BP22528 89 aa6.84□□□□□ -1.31
SCFD1-201ENST00000311943 CEND1Q8N111 149 aa6.84□□□□□ -1.31
SCFD1-201ENST00000311943 Q8N377 158 aa6.84□□□□□ -1.31
SCFD1-201ENST00000311943 PRO1933Q9H354 126 aa6.84□□□□□ -1.31
SCFD1-201ENST00000311943 TRBV7-6A0A0J9YX20 115 aa6.83□□□□□ -1.32
SCFD1-201ENST00000311943 LINC00575Q6W349 94 aa6.83□□□□□ -1.32
SCFD1-201ENST00000311943 FAM218AQ96MZ4 157 aa6.83□□□□□ -1.32
SCFD1-201ENST00000311943 CBY1Q9Y3M2 126 aa6.83□□□□□ -1.32
SCFD1-201ENST00000311943 Q6ZQY7 126 aa6.81□□□□□ -1.32
SCFD1-201ENST00000311943 IGLV5-48A0A075B6I7 105 aa6.81□□□□□ -1.32
SCFD1-201ENST00000311943 SSBP3-AS1Q7Z2R9 100 aa6.8□□□□□ -1.32
SCFD1-201ENST00000311943 RAB37Q96AX2 223 aa6.8□□□□□ -1.32
SCFD1-201ENST00000311943 TEX49A0A1B0GTD5 131 aa6.79□□□□□ -1.32
SCFD1-201ENST00000311943 GHRHP01286 108 aa6.79□□□□□ -1.32
SCFD1-201ENST00000311943 IGLV7-46A0A075B6I9 117 aa6.79□□□□□ -1.32
SCFD1-201ENST00000311943 hADV29S1A0JD25 119 aa6.78□□□□□ -1.32
SCFD1-201ENST00000311943 NHP2Q9NX24 153 aaKnown RBP6.78□□□□□ -1.32
SCFD1-201ENST00000311943 A0A0B4J2C4 111 aa6.77□□□□□ -1.32
SCFD1-201ENST00000311943 SPAG11AQ6PDA7 123 aa6.77□□□□□ -1.32
SCFD1-201ENST00000311943 LAMTOR3Q9UHA4 124 aa6.77□□□□□ -1.32
SCFD1-201ENST00000311943 SPINK1P00995 79 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 560.1 ms