RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 PSMB2P49721 201 aa13.31□□□□□ -0.28
SMCO4-201ENST00000298966 GAGE2BQ13066 116 aa13.31□□□□□ -0.28
SMCO4-201ENST00000298966 TMEM126AQ9H061 195 aa13.31□□□□□ -0.28
SMCO4-201ENST00000298966 GAGE10A6NGK3 116 aa13.3□□□□□ -0.28
SMCO4-201ENST00000298966 VPREB1P12018 145 aa13.3□□□□□ -0.28
SMCO4-201ENST00000298966 UBE2V1Q13404 147 aa13.3□□□□□ -0.28
SMCO4-201ENST00000298966 C9orf129Q5T035 196 aaKnown RBP13.3□□□□□ -0.28
SMCO4-201ENST00000298966 LRP2P98164 4655 aa13.3□□□□□ -0.28
SMCO4-201ENST00000298966 IGLV5-37A0A075B6J1 123 aa13.29□□□□□ -0.28
SMCO4-201ENST00000298966 MT1HL1P0DM35 61 aa13.29□□□□□ -0.28
SMCO4-201ENST00000298966 Q8NDZ9 215 aa13.29□□□□□ -0.28
SMCO4-201ENST00000298966 TRIAP1O43715 76 aa13.28□□□□□ -0.28
SMCO4-201ENST00000298966 M0R378 163 aa13.27□□□□□ -0.29
SMCO4-201ENST00000298966 COX6CP09669 75 aa13.27□□□□□ -0.29
SMCO4-201ENST00000298966 RPL28P46779 137 aaKnown RBP13.27□□□□□ -0.29
SMCO4-201ENST00000298966 TRBV20-1A0A075B6N2 111 aa13.26□□□□□ -0.29
SMCO4-201ENST00000298966 S100A7L2Q5SY68 101 aa13.26□□□□□ -0.29
SMCO4-201ENST00000298966 SDIM1Q6ZPB5 146 aa13.26□□□□□ -0.29
SMCO4-201ENST00000298966 NKAPP1Q8N9T2 125 aa13.26□□□□□ -0.29
SMCO4-201ENST00000298966 OR13C6PQ8NH95 151 aa13.26□□□□□ -0.29
SMCO4-201ENST00000298966 A0A096LNI7 61 aa13.25□□□□□ -0.29
SMCO4-201ENST00000298966 SCGB1C2P0DMR2 95 aa13.25□□□□□ -0.29
SMCO4-201ENST00000298966 TNXBP22105 4242 aa13.24□□□□□ -0.29
SMCO4-201ENST00000298966 NCR3O14931 201 aa13.24□□□□□ -0.29
SMCO4-201ENST00000298966 PRR3P79522 188 aaKnown RBP13.24□□□□□ -0.29
SMCO4-201ENST00000298966 IGLV6-57P01721 117 aa13.23□□□□□ -0.29
SMCO4-201ENST00000298966 SMIM11BQ8TCY0 68 aa13.22□□□□□ -0.29
SMCO4-201ENST00000298966 IGKV2-24A0A0C4DH68 120 aa13.19□□□□□ -0.3
SMCO4-201ENST00000298966 TCL1BO95988 128 aa13.19□□□□□ -0.3
SMCO4-201ENST00000298966 ATXN8Q156A1 80 aa13.17□□□□□ -0.3
SMCO4-201ENST00000298966 TRBV10-3A0A0K0K1G6 114 aa13.16□□□□□ -0.3
SMCO4-201ENST00000298966 H0YGX0 51 aa13.16□□□□□ -0.3
SMCO4-201ENST00000298966 H3BMG7 143 aa13.15□□□□□ -0.3
SMCO4-201ENST00000298966 MRPL55Q7Z7F7 128 aaKnown RBP13.15□□□□□ -0.3
SMCO4-201ENST00000298966 SPACA4Q8TDM5 124 aa13.15□□□□□ -0.3
SMCO4-201ENST00000298966 C22orf24Q9Y442 160 aa13.15□□□□□ -0.3
SMCO4-201ENST00000298966 TRAV23DV6A0A075B6W5 121 aa13.14□□□□□ -0.31
SMCO4-201ENST00000298966 LST1O00453 97 aa13.14□□□□□ -0.31
SMCO4-201ENST00000298966 FAM19A5Q7Z5A7 132 aaPredicted RBP13.14□□□□□ -0.31
SMCO4-201ENST00000298966 C7orf33Q8WU49 177 aa13.14□□□□□ -0.31
SMCO4-201ENST00000298966 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.14□□□□□ -0.31
SMCO4-201ENST00000298966 FAM168BA1KXE4 195 aa13.13□□□□□ -0.31
SMCO4-201ENST00000298966 TRBV7-6A0A0J9YX20 115 aa13.12□□□□□ -0.31
SMCO4-201ENST00000298966 M0QXV9 152 aa13.12□□□□□ -0.31
SMCO4-201ENST00000298966 KCNQ1DNQ9H478 68 aa13.12□□□□□ -0.31
SMCO4-201ENST00000298966 PRYO14603 147 aa13.11□□□□□ -0.31
SMCO4-201ENST00000298966 CHTF8P0CG12 524 aa13.11□□□□□ -0.31
SMCO4-201ENST00000298966 KRTAP7-1Q8IUC3 87 aa13.11□□□□□ -0.31
SMCO4-201ENST00000298966 CLEC2BQ92478 149 aa13.11□□□□□ -0.31
SMCO4-201ENST00000298966 DIRC1Q969H9 104 aa13.11□□□□□ -0.31
SMCO4-201ENST00000298966 IGLV1-50A0A075B6I6 118 aa13.09□□□□□ -0.31
SMCO4-201ENST00000298966 A0A1W2PNN7 141 aa13.09□□□□□ -0.31
SMCO4-201ENST00000298966 F8W1H4 67 aa13.09□□□□□ -0.31
SMCO4-201ENST00000298966 PANO1I0J062 215 aa13.09□□□□□ -0.31
SMCO4-201ENST00000298966 DPH3Q96FX2 82 aa13.09□□□□□ -0.31
SMCO4-201ENST00000298966 LINC00167Q96N53 147 aa13.09□□□□□ -0.31
SMCO4-201ENST00000298966 PRO0461Q9UI25 63 aa13.09□□□□□ -0.31
SMCO4-201ENST00000298966 ZNF73O43830 326 aaPredicted RBP13.08□□□□□ -0.32
SMCO4-201ENST00000298966 SNCGO76070 127 aa13.08□□□□□ -0.32
SMCO4-201ENST00000298966 TRACP01848 142 aa13.08□□□□□ -0.32
SMCO4-201ENST00000298966 A0A1B0GX51 115 aa13.07□□□□□ -0.32
SMCO4-201ENST00000298966 C6orf99Q4VX62 202 aa13.07□□□□□ -0.32
SMCO4-201ENST00000298966 PLAC8Q9NZF1 115 aa13.05□□□□□ -0.32
SMCO4-201ENST00000298966 LINC01600Q96MT4 127 aa13.04□□□□□ -0.32
SMCO4-201ENST00000298966 FAM218AQ96MZ4 157 aa13.04□□□□□ -0.32
SMCO4-201ENST00000298966 A0A087WYN8 130 aa13.03□□□□□ -0.32
SMCO4-201ENST00000298966 C9JAW5 83 aa13.03□□□□□ -0.32
SMCO4-201ENST00000298966 SPRR1AP35321 89 aa13.02□□□□□ -0.33
SMCO4-201ENST00000298966 COX7BP24311 80 aa13.01□□□□□ -0.33
SMCO4-201ENST00000298966 SLC25A20O43772 301 aa13□□□□□ -0.33
SMCO4-201ENST00000298966 ELOF1P60002 83 aaKnown RBP13□□□□□ -0.33
SMCO4-201ENST00000298966 UBE2BP63146 152 aa13□□□□□ -0.33
SMCO4-201ENST00000298966 RPL37AP8A6NKH3 93 aa12.99□□□□□ -0.33
SMCO4-201ENST00000298966 H3BT86 120 aa12.99□□□□□ -0.33
SMCO4-201ENST00000298966 SMCPP49901 116 aaPredicted RBP12.99□□□□□ -0.33
SMCO4-201ENST00000298966 REG3GQ6UW15 175 aa12.99□□□□□ -0.33
SMCO4-201ENST00000298966 LINC00575Q6W349 94 aa12.98□□□□□ -0.33
SMCO4-201ENST00000298966 PHF5AQ7RTV0 110 aaKnown RBP12.98□□□□□ -0.33
SMCO4-201ENST00000298966 MTURNQ8N3F0 131 aa12.98□□□□□ -0.33
SMCO4-201ENST00000298966 ETDCA0A1B0GVM5 59 aa12.97□□□□□ -0.33
SMCO4-201ENST00000298966 DNAL4O96015 105 aa12.97□□□□□ -0.33
SMCO4-201ENST00000298966 ANKRD29Q8N6D5 301 aa12.96□□□□□ -0.33
SMCO4-201ENST00000298966 KRTAP4-16G5E9R7 235 aaPredicted RBP12.95□□□□□ -0.34
SMCO4-201ENST00000298966 GHRHP01286 108 aa12.94□□□□□ -0.34
SMCO4-201ENST00000298966 hADV29S1A0JD25 119 aa12.93□□□□□ -0.34
SMCO4-201ENST00000298966 H3BQ85 93 aa12.93□□□□□ -0.34
SMCO4-201ENST00000298966 Q6ZRX8 168 aa12.93□□□□□ -0.34
SMCO4-201ENST00000298966 DHRS4-AS1Q9P1J3 65 aa12.93□□□□□ -0.34
SMCO4-201ENST00000298966 B5MCH6 92 aa12.91□□□□□ -0.34
SMCO4-201ENST00000298966 H0Y9J4 135 aa12.91□□□□□ -0.34
SMCO4-201ENST00000298966 BAALC-AS2P0C853 105 aa12.89□□□□□ -0.35
SMCO4-201ENST00000298966 OCIAD2Q56VL3 154 aa12.89□□□□□ -0.35
SMCO4-201ENST00000298966 TEN1Q86WV5 123 aa12.89□□□□□ -0.35
SMCO4-201ENST00000298966 ETDBQ3ZM63 59 aa12.88□□□□□ -0.35
SMCO4-201ENST00000298966 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.88□□□□□ -0.35
SMCO4-201ENST00000298966 ORMDL1Q9P0S3 153 aa12.88□□□□□ -0.35
SMCO4-201ENST00000298966 BCE1O60756 84 aa12.87□□□□□ -0.35
SMCO4-201ENST00000298966 KRTAP10-8P60410 259 aa12.86□□□□□ -0.35
SMCO4-201ENST00000298966 FAM19A1Q7Z5A9 133 aa12.85□□□□□ -0.35
SMCO4-201ENST00000298966 KRTAP11-1Q8IUC1 163 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms