RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ST20-AS1Q8NBB2 130 aa9.14□□□□□ -0.95
NPC1-201ENST00000269228 SPACA4Q8TDM5 124 aa9.14□□□□□ -0.95
NPC1-201ENST00000269228 BAHCC1Q9P281 2608 aa9.13□□□□□ -0.95
NPC1-201ENST00000269228 PSPHP1O15172 72 aa9.12□□□□□ -0.95
NPC1-201ENST00000269228 SERTAD4-AS1Q5TG53 156 aa9.12□□□□□ -0.95
NPC1-201ENST00000269228 C15orf56Q8N910 161 aa9.11□□□□□ -0.95
NPC1-201ENST00000269228 PRO0628Q9UI54 55 aa9.1□□□□□ -0.95
NPC1-201ENST00000269228 CRYGAP11844 174 aa9.1□□□□□ -0.95
NPC1-201ENST00000269228 BCE1O60756 84 aa9.09□□□□□ -0.95
NPC1-201ENST00000269228 LINC00476Q8WZB0 136 aa9.09□□□□□ -0.95
NPC1-201ENST00000269228 HCG22E2RYF7 251 aa9.08□□□□□ -0.96
NPC1-201ENST00000269228 IGLV6-57P01721 117 aa9.07□□□□□ -0.96
NPC1-201ENST00000269228 EIF4EBP3O60516 100 aaPredicted RBP9.07□□□□□ -0.96
NPC1-201ENST00000269228 PCOTHQ58A44 107 aa9.07□□□□□ -0.96
NPC1-201ENST00000269228 APLNQ9ULZ1 77 aa9.07□□□□□ -0.96
NPC1-201ENST00000269228 A0A087WTM6 91 aa9.05□□□□□ -0.96
NPC1-201ENST00000269228 TYMSOSQ8TAI1 123 aa9.05□□□□□ -0.96
NPC1-201ENST00000269228 Q8NBF4 154 aa9.05□□□□□ -0.96
NPC1-201ENST00000269228 NOTCH1P46531 2555 aa9.04□□□□□ -0.96
NPC1-201ENST00000269228 IGLV1-50A0A075B6I6 118 aa9.04□□□□□ -0.96
NPC1-201ENST00000269228 H0Y9P7 68 aa9.04□□□□□ -0.96
NPC1-201ENST00000269228 CXCL6P80162 114 aa9.04□□□□□ -0.96
NPC1-201ENST00000269228 CASC10Q5T4H9 136 aa9.03□□□□□ -0.96
NPC1-201ENST00000269228 TMEM254Q8TBM7 123 aa9.02□□□□□ -0.97
NPC1-201ENST00000269228 Q6ZQT0 140 aa9.02□□□□□ -0.97
NPC1-201ENST00000269228 FLNCQ14315 2725 aa9.01□□□□□ -0.97
NPC1-201ENST00000269228 LAMA1P25391 3075 aa9.01□□□□□ -0.97
NPC1-201ENST00000269228 RPL37AP61513 92 aaKnown RBP9.01□□□□□ -0.97
NPC1-201ENST00000269228 C9orf129Q5T035 196 aaKnown RBP9.01□□□□□ -0.97
NPC1-201ENST00000269228 C9orf163Q8N9P6 203 aa9.01□□□□□ -0.97
NPC1-201ENST00000269228 KCNQ1DNQ9H478 68 aa9.01□□□□□ -0.97
NPC1-201ENST00000269228 RPS28P62857 69 aaKnown RBP9□□□□□ -0.97
NPC1-201ENST00000269228 PLA2G1BP04054 148 aaKnown RBP8.99□□□□□ -0.97
NPC1-201ENST00000269228 SMIM29Q86T20 159 aa8.99□□□□□ -0.97
NPC1-201ENST00000269228 ZNF575Q86XF7 245 aa8.99□□□□□ -0.97
NPC1-201ENST00000269228 GCN1Q92616 2671 aaKnown RBP8.99□□□□□ -0.97
NPC1-201ENST00000269228 IGKV2D-30A0A075B6S6 120 aa8.98□□□□□ -0.97
NPC1-201ENST00000269228 IGKV2-30P06310 120 aa8.98□□□□□ -0.97
NPC1-201ENST00000269228 FRYLO94915 3013 aa8.98□□□□□ -0.97
NPC1-201ENST00000269228 FRYQ5TBA9 3013 aa8.98□□□□□ -0.97
NPC1-201ENST00000269228 LOC110117498A0A087WWA1 95 aa8.98□□□□□ -0.97
NPC1-201ENST00000269228 UBR5O95071 2799 aaPredicted RBP8.97□□□□□ -0.97
NPC1-201ENST00000269228 WIPF1O43516 503 aa8.97□□□□□ -0.97
NPC1-201ENST00000269228 LINC00528Q8N1L1 170 aa8.97□□□□□ -0.97
NPC1-201ENST00000269228 A0A1B0GW54 56 aa8.97□□□□□ -0.97
NPC1-201ENST00000269228 CELSR3Q9NYQ7 3312 aa8.96□□□□□ -0.97
NPC1-201ENST00000269228 COL6A3P12111 3177 aa8.96□□□□□ -0.98
NPC1-201ENST00000269228 hDV103S1A0JD37 113 aa8.96□□□□□ -0.98
NPC1-201ENST00000269228 SPINK1P00995 79 aa8.96□□□□□ -0.98
NPC1-201ENST00000269228 SMR3BP02814 79 aaPredicted RBP8.96□□□□□ -0.98
NPC1-201ENST00000269228 TLX1NBP0CAT3 122 aa8.94□□□□□ -0.98
NPC1-201ENST00000269228 C1orf64Q8NEQ6 169 aa8.94□□□□□ -0.98
NPC1-201ENST00000269228 VCANP13611 3396 aa8.93□□□□□ -0.98
NPC1-201ENST00000269228 A0A1W2PNN7 141 aa8.92□□□□□ -0.98
NPC1-201ENST00000269228 ZNF861PO60384 105 aa8.91□□□□□ -0.98
NPC1-201ENST00000269228 TRBV7-4A0A0J9YYF1 115 aa8.9□□□□□ -0.98
NPC1-201ENST00000269228 ATMQ13315 3056 aa8.9□□□□□ -0.99
NPC1-201ENST00000269228 LINC00313P59037 77 aa8.9□□□□□ -0.99
NPC1-201ENST00000269228 TNRC18O15417 2968 aaPredicted RBP8.89□□□□□ -0.99
NPC1-201ENST00000269228 CNBPP62633 177 aaKnown RBP8.89□□□□□ -0.99
NPC1-201ENST00000269228 J3QL48 77 aa8.88□□□□□ -0.99
NPC1-201ENST00000269228 LINC00336Q6ZUF6 198 aa8.88□□□□□ -0.99
NPC1-201ENST00000269228 PLA2G2DQ9UNK4 145 aa8.88□□□□□ -0.99
NPC1-201ENST00000269228 TP53AIP1Q9HCN2 124 aa8.88□□□□□ -0.99
NPC1-201ENST00000269228 ANAPC11Q9NYG5 84 aa8.86□□□□□ -0.99
NPC1-201ENST00000269228 PSORS1C2Q9UIG4 136 aa8.86□□□□□ -0.99
NPC1-201ENST00000269228 IGFL1Q6UW32 110 aa8.86□□□□□ -0.99
NPC1-201ENST00000269228 Q8N377 158 aa8.85□□□□□ -0.99
NPC1-201ENST00000269228 DMXL2Q8TDJ6 3036 aa8.85□□□□□ -0.99
NPC1-201ENST00000269228 TNP2Q05952 138 aa8.85□□□□□ -0.99
NPC1-201ENST00000269228 A0A0G2JQZ4 141 aa8.84□□□□□ -0.99
NPC1-201ENST00000269228 ITPR1Q14643 2758 aa8.84□□□□□ -0.99
NPC1-201ENST00000269228 Q96NJ1 140 aa8.84□□□□□ -0.99
NPC1-201ENST00000269228 NBEAL1Q6ZS30 2694 aa8.84□□□□□ -0.99
NPC1-201ENST00000269228 COL12A1Q99715 3063 aa8.84□□□□□ -0.99
NPC1-201ENST00000269228 BOD1L1Q8NFC6 3051 aa8.84□□□□□ -0.99
NPC1-201ENST00000269228 IGLV7-43P04211 117 aa8.83□□□□□ -1
NPC1-201ENST00000269228 DNAH14Q0VDD8 3507 aa8.82□□□□□ -1
NPC1-201ENST00000269228 TACC2O95359 2948 aa8.82□□□□□ -1
NPC1-201ENST00000269228 ERC2-IT1O76042 136 aa8.81□□□□□ -1
NPC1-201ENST00000269228 C7orf65Q6ZTY9 151 aa8.81□□□□□ -1
NPC1-201ENST00000269228 SSBP3-AS1Q7Z2R9 100 aa8.81□□□□□ -1
NPC1-201ENST00000269228 LINC00304Q8N9R0 145 aa8.81□□□□□ -1
NPC1-201ENST00000269228 NBEAL2Q6ZNJ1 2754 aa8.81□□□□□ -1
NPC1-201ENST00000269228 A8MWP4 228 aa8.8□□□□□ -1
NPC1-201ENST00000269228 K7EQZ3 153 aa8.8□□□□□ -1
NPC1-201ENST00000269228 ITPR2Q14571 2701 aa8.8□□□□□ -1
NPC1-201ENST00000269228 FAM104AQ969W3 186 aa8.79□□□□□ -1
NPC1-201ENST00000269228 TRAV22A0A0B4J277 110 aa8.78□□□□□ -1
NPC1-201ENST00000269228 ATP11AUNQ6ZP68 121 aa8.76□□□□□ -1.01
NPC1-201ENST00000269228 SPRR4Q96PI1 79 aa8.75□□□□□ -1.01
NPC1-201ENST00000269228 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
NPC1-201ENST00000269228 NSD1Q96L73 2696 aaPredicted RBP8.74□□□□□ -1.01
NPC1-201ENST00000269228 MRPL34Q9BQ48 92 aaKnown RBP8.74□□□□□ -1.01
NPC1-201ENST00000269228 ADGRG4Q8IZF6 3080 aa8.74□□□□□ -1.01
NPC1-201ENST00000269228 SPAG11AQ6PDA7 123 aa8.73□□□□□ -1.01
NPC1-201ENST00000269228 DSCR10P59022 87 aa8.73□□□□□ -1.01
NPC1-201ENST00000269228 IGLV5-37A0A075B6J1 123 aa8.73□□□□□ -1.01
NPC1-201ENST00000269228 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.72□□□□□ -1.01
NPC1-201ENST00000269228 FREM2Q5SZK8 3169 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms