RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 SERTAD4-AS1Q5TG53 156 aa10.04□□□□□ -0.8
CLN6-216ENST00000636876 PLA2G2DQ9UNK4 145 aa10.04□□□□□ -0.8
CLN6-216ENST00000636876 VPS13BQ7Z7G8 4022 aa10.03□□□□□ -0.8
CLN6-216ENST00000636876 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
CLN6-216ENST00000636876 VAMP8Q9BV40 100 aa10.03□□□□□ -0.8
CLN6-216ENST00000636876 M0QXV9 152 aa10.02□□□□□ -0.81
CLN6-216ENST00000636876 DAND5Q8N907 189 aa10.02□□□□□ -0.81
CLN6-216ENST00000636876 LITAFQ99732 161 aa10.02□□□□□ -0.81
CLN6-216ENST00000636876 IGLV5-37A0A075B6J1 123 aa10.01□□□□□ -0.81
CLN6-216ENST00000636876 ADAMTSL4-AS1Q5T5F5 129 aa10.01□□□□□ -0.81
CLN6-216ENST00000636876 SCGB1D4Q6XE38 83 aa10.01□□□□□ -0.81
CLN6-216ENST00000636876 PHF5AQ7RTV0 110 aaKnown RBP10.01□□□□□ -0.81
CLN6-216ENST00000636876 Q8N1X5 172 aa10.01□□□□□ -0.81
CLN6-216ENST00000636876 PAM16Q9Y3D7 125 aa10.01□□□□□ -0.81
CLN6-216ENST00000636876 SPATA45Q537H7 98 aa10□□□□□ -0.81
CLN6-216ENST00000636876 C7orf33Q8WU49 177 aa10□□□□□ -0.81
CLN6-216ENST00000636876 C22orf24Q9Y442 160 aa10□□□□□ -0.81
CLN6-216ENST00000636876 SRRM2Q9UQ35 2752 aaKnown RBP10□□□□□ -0.81
CLN6-216ENST00000636876 FAM229AH3BQW9 127 aa9.99□□□□□ -0.81
CLN6-216ENST00000636876 VPREB1P12018 145 aa9.99□□□□□ -0.81
CLN6-216ENST00000636876 RPL24P83731 157 aaKnown RBP9.99□□□□□ -0.81
CLN6-216ENST00000636876 Q8NDZ9 215 aa9.99□□□□□ -0.81
CLN6-216ENST00000636876 TP73-AS1Q9UF72 201 aa9.99□□□□□ -0.81
CLN6-216ENST00000636876 LOC107984156A0A0G2JMH3 177 aa9.98□□□□□ -0.81
CLN6-216ENST00000636876 COX8AP10176 69 aa9.98□□□□□ -0.81
CLN6-216ENST00000636876 ARL17AQ8IVW1 177 aa9.98□□□□□ -0.81
CLN6-216ENST00000636876 BOD1L2Q8IYS8 172 aa9.98□□□□□ -0.81
CLN6-216ENST00000636876 NKAPP1Q8N9T2 125 aa9.98□□□□□ -0.81
CLN6-216ENST00000636876 TMEM238C9JI98 176 aa9.97□□□□□ -0.81
CLN6-216ENST00000636876 LBHQ53QV2 105 aaPredicted RBP9.97□□□□□ -0.81
CLN6-216ENST00000636876 Q5VSD8 79 aa9.97□□□□□ -0.81
CLN6-216ENST00000636876 MIEN1Q9BRT3 115 aa9.97□□□□□ -0.81
CLN6-216ENST00000636876 SOSTDC1Q6X4U4 206 aa9.96□□□□□ -0.82
CLN6-216ENST00000636876 MRPL55Q7Z7F7 128 aaKnown RBP9.96□□□□□ -0.82
CLN6-216ENST00000636876 SPANXDQ9BXN6 97 aa9.96□□□□□ -0.82
CLN6-216ENST00000636876 SPANXCQ9NY87 97 aa9.96□□□□□ -0.82
CLN6-216ENST00000636876 DLEU1O43261 78 aa9.95□□□□□ -0.82
CLN6-216ENST00000636876 EIF4EBP3O60516 100 aaPredicted RBP9.95□□□□□ -0.82
CLN6-216ENST00000636876 RPL37AP61513 92 aaKnown RBP9.95□□□□□ -0.82
CLN6-216ENST00000636876 NPC2P61916 151 aa9.95□□□□□ -0.82
CLN6-216ENST00000636876 LINC00308Q8TCZ7 52 aa9.95□□□□□ -0.82
CLN6-216ENST00000636876 C14orf144Q96I85 54 aa9.95□□□□□ -0.82
CLN6-216ENST00000636876 PLA2G1BP04054 148 aaKnown RBP9.94□□□□□ -0.82
CLN6-216ENST00000636876 UBE2BP63146 152 aa9.94□□□□□ -0.82
CLN6-216ENST00000636876 LINC00167Q96N53 147 aa9.94□□□□□ -0.82
CLN6-216ENST00000636876 LOC105371267A0A1B0GV96 52 aa9.93□□□□□ -0.82
CLN6-216ENST00000636876 GAGE10A6NGK3 116 aa9.93□□□□□ -0.82
CLN6-216ENST00000636876 Q6ZVH6 145 aa9.93□□□□□ -0.82
CLN6-216ENST00000636876 KRTAP11-1Q8IUC1 163 aa9.93□□□□□ -0.82
CLN6-216ENST00000636876 M0R378 163 aa9.92□□□□□ -0.82
CLN6-216ENST00000636876 KRTAP10-4P60372 401 aaPredicted RBP9.92□□□□□ -0.82
CLN6-216ENST00000636876 PRR3P79522 188 aaKnown RBP9.92□□□□□ -0.82
CLN6-216ENST00000636876 SLC25A34Q6PIV7 304 aa9.92□□□□□ -0.82
CLN6-216ENST00000636876 HERC1Q15751 4861 aa9.92□□□□□ -0.82
CLN6-216ENST00000636876 NCR3O14931 201 aa9.91□□□□□ -0.82
CLN6-216ENST00000636876 NDUFC2O95298 119 aa9.91□□□□□ -0.82
CLN6-216ENST00000636876 IFITM1P13164 125 aa9.91□□□□□ -0.82
CLN6-216ENST00000636876 S100A12P80511 92 aa9.91□□□□□ -0.82
CLN6-216ENST00000636876 SPANXB1Q9NS25 103 aaPredicted RBP9.91□□□□□ -0.82
CLN6-216ENST00000636876 PSORS1C2Q9UIG4 136 aa9.91□□□□□ -0.82
CLN6-216ENST00000636876 RPL37AP8A6NKH3 93 aa9.9□□□□□ -0.82
CLN6-216ENST00000636876 SMIM6P0DI80 62 aa9.9□□□□□ -0.82
CLN6-216ENST00000636876 COPS9Q8WXC6 57 aa9.9□□□□□ -0.82
CLN6-216ENST00000636876 PPDPFQ9H3Y8 114 aa9.9□□□□□ -0.82
CLN6-216ENST00000636876 DMBT1Q9UGM3 2413 aaPredicted RBP9.9□□□□□ -0.83
CLN6-216ENST00000636876 PKHD1L1Q86WI1 4243 aa9.88□□□□□ -0.83
CLN6-216ENST00000636876 TRBV10-2A0A0K0K1G8 114 aa9.88□□□□□ -0.83
CLN6-216ENST00000636876 SRSF9Q13242 221 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLN6-216ENST00000636876 MUSTN1Q8IVN3 82 aa9.88□□□□□ -0.83
CLN6-216ENST00000636876 IGLV1-50A0A075B6I6 118 aa9.87□□□□□ -0.83
CLN6-216ENST00000636876 IGKV2-28A0A075B6P5 120 aa9.87□□□□□ -0.83
CLN6-216ENST00000636876 IGKV2D-28P01615 120 aa9.87□□□□□ -0.83
CLN6-216ENST00000636876 HIGD1BQ9P298 99 aa9.87□□□□□ -0.83
CLN6-216ENST00000636876 C1orf137Q5JT78 98 aa9.86□□□□□ -0.83
CLN6-216ENST00000636876 C2orf91Q6ZV80 131 aa9.86□□□□□ -0.83
CLN6-216ENST00000636876 FLG2Q5D862 2391 aaPredicted RBP9.85□□□□□ -0.83
CLN6-216ENST00000636876 HIST1H4GQ99525 98 aa9.84□□□□□ -0.83
CLN6-216ENST00000636876 TRBV10-3A0A0K0K1G6 114 aa9.83□□□□□ -0.84
CLN6-216ENST00000636876 DDTP30046 118 aa9.83□□□□□ -0.84
CLN6-216ENST00000636876 S100A7L2Q5SY68 101 aa9.82□□□□□ -0.84
CLN6-216ENST00000636876 LINC00518Q8N0U6 118 aa9.82□□□□□ -0.84
CLN6-216ENST00000636876 PRYO14603 147 aa9.81□□□□□ -0.84
CLN6-216ENST00000636876 BCE1O60756 84 aa9.81□□□□□ -0.84
CLN6-216ENST00000636876 IGLV6-57P01721 117 aa9.81□□□□□ -0.84
CLN6-216ENST00000636876 IGLV7-43P04211 117 aa9.81□□□□□ -0.84
CLN6-216ENST00000636876 HNRNPA3P51991 378 aaKnown RBP9.81□□□□□ -0.84
CLN6-216ENST00000636876 TMEM126AQ9H061 195 aa9.81□□□□□ -0.84
CLN6-216ENST00000636876 KCNQ1DNQ9H478 68 aa9.81□□□□□ -0.84
CLN6-216ENST00000636876 UQCR10Q9UDW1 63 aa9.81□□□□□ -0.84
CLN6-216ENST00000636876 REG3GQ6UW15 175 aa9.8□□□□□ -0.84
CLN6-216ENST00000636876 LINC00337Q8N6G1 96 aa9.79□□□□□ -0.84
CLN6-216ENST00000636876 OR13C6PQ8NH95 151 aa9.79□□□□□ -0.84
CLN6-216ENST00000636876 MYCBP2O75592 4640 aa9.78□□□□□ -0.84
CLN6-216ENST00000636876 A4D1N5 150 aa9.78□□□□□ -0.84
CLN6-216ENST00000636876 INAFM2P0DMQ5 153 aa9.78□□□□□ -0.84
CLN6-216ENST00000636876 TAL2Q16559 108 aa9.78□□□□□ -0.84
CLN6-216ENST00000636876 PRO1933Q9H354 126 aa9.78□□□□□ -0.84
CLN6-216ENST00000636876 C12orf57Q99622 126 aa9.77□□□□□ -0.85
CLN6-216ENST00000636876 SPRR1AP35321 89 aa9.76□□□□□ -0.85
CLN6-216ENST00000636876 CBY1Q9Y3M2 126 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms