RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.37□□□□□ -2.35
SMARCB1-209ENST00000635578 LYRM2Q9NU23 88 aaPredicted RBP0.37□□□□□ -2.35
SMARCB1-209ENST00000635578 FKBP11Q9NYL4 201 aa0.37□□□□□ -2.35
SMARCB1-209ENST00000635578 IL36BQ9NZH7 164 aa0.37□□□□□ -2.35
SMARCB1-209ENST00000635578 U3KQ87 197 aa0.37□□□□□ -2.35
SMARCB1-209ENST00000635578 TRBV7-3A0A075B6L6 115 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 IGHV1-58A0A0C4DH39 117 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 LOC107984640A0A0U1RRK4 108 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 CTXND1A0A1B0GTU2 59 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 LINC00959A0A1B0GUT2 108 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 TRBV6-4A0A1B0GX49 114 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 C7orf77A4D0Y5 90 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 LINC00862A6NCI5 91 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 C11orf86A6NJI1 115 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 ZNF727A8MUV8 499 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 A8MWV9 139 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 F2Z2F3 143 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 H3BNG1 76 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 K7EMI3 77 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 M0QY20 66 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 ERC2-IT1O76042 136 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 APOMO95445 188 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 MPC2O95563 127 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 IFNA7P01567 189 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 FABP1P07148 127 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 IGLC6P0CF74 106 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 ESDP10768 282 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 CRYGAP11844 174 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 RPL12P30050 165 aaKnown RBP0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 CSN1S1P47710 185 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 TSPEAR-AS2P59090 65 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 CNBPP62633 177 aaKnown RBP0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 RAB31Q13636 194 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 COTL1Q14019 142 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 PMCHL1Q16048 86 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 MIAQ16674 131 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 TPRXLQ17RH7 258 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 KRTAP20-1Q3LI63 56 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 TMEM128Q5BJH2 165 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 SPANXN1Q5VSR9 72 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 SAMD13Q5VXD3 122 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 KRTAP5-10Q6L8G5 202 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 RASL11AQ6T310 242 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 SPINK6Q6UWN8 80 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 LYZL1Q6UWQ5 148 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 C12orf45Q8N5I9 185 aaPredicted RBP0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 OR2D3Q8NGH3 330 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 TERB2Q8NHR7 220 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 STOML3Q8TAV4 291 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 PPP1R1CQ8WVI7 109 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 BORCS5Q969J3 196 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 DPH3Q96FX2 82 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 MRAP2Q96G30 205 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 SFRP2Q96HF1 295 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 C2orf50Q96LR7 162 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 AQP10Q96PS8 301 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 MRPS26Q9BYN8 205 aaKnown RBP0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 VCX3BQ9H321 246 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 SMDT1Q9H4I9 107 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 OTORQ9NRC9 128 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 TMEM14CQ9P0S9 112 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 GNG13Q9P2W3 67 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 PRELID1Q9Y255 219 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 UBE2D4Q9Y2X8 147 aa0.36□□□□□ -2.35
SMARCB1-209ENST00000635578 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 SMIM31A0A1B0GVY4 71 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 D6R8Y8 96 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 C17orf112F2Z3M2 114 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 H3BPC8 53 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 M0R378 163 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 NDUFA1O15239 70 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 SSNA1O43805 119 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 PFDN1O60925 122 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 ATP5HO75947 161 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 CFDP00746 253 aaPredicted RBP0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 LTAP01374 205 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 CXCL1P09341 107 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 SMIM17P0DL12 118 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 PVALBP20472 110 aaPredicted RBP0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 FAUP35544 74 aaKnown RBP0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 RPL35P42766 123 aaKnown RBP0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 TAS2R30P59541 319 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 RAB5BP61020 215 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 TMEM258P61165 79 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 CCL20P78556 96 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 RBM3P98179 157 aaKnown RBP0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 CD164Q04900 197 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 PDE6HQ13956 83 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 ACOT6Q3I5F7 207 aaPredicted RBP0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 TDRG1Q3Y452 100 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 ASB16-AS1Q495Z4 193 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 MRPL51Q4U2R6 128 aaKnown RBP0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 AKR1C8PQ5T2L2 129 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 FAM162BQ5T6X4 162 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 EIF5AL1Q6IS14 154 aaKnown RBP0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 ALKAL2Q6UX46 152 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 AP3S1Q92572 193 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 DIRC1Q969H9 104 aa0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 PACRGQ96M98 296 aaPredicted RBP0.35□□□□□ -2.35
SMARCB1-209ENST00000635578 SPRR4Q96PI1 79 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms