RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 FBN3Q75N90 2809 aa14.05□□□□□ -0.16
SPAST-204ENST00000621856 ATXN8Q156A1 80 aa14.04□□□□□ -0.16
SPAST-204ENST00000621856 RNF151Q2KHN1 245 aa14.04□□□□□ -0.16
SPAST-204ENST00000621856 Q8NDZ9 215 aa14.04□□□□□ -0.16
SPAST-204ENST00000621856 SLPIP03973 132 aa14.04□□□□□ -0.16
SPAST-204ENST00000621856 GAGE2EQ4V326 116 aa14.04□□□□□ -0.16
SPAST-204ENST00000621856 GAGE2DQ9UEU5 116 aa14.04□□□□□ -0.16
SPAST-204ENST00000621856 RPL28P46779 137 aaKnown RBP14.03□□□□□ -0.16
SPAST-204ENST00000621856 MTURNQ8N3F0 131 aa14.03□□□□□ -0.16
SPAST-204ENST00000621856 SMIM11BQ8TCY0 68 aa14.03□□□□□ -0.16
SPAST-204ENST00000621856 CLEC2BQ92478 149 aa14.02□□□□□ -0.16
SPAST-204ENST00000621856 F8W1H4 67 aa14.01□□□□□ -0.17
SPAST-204ENST00000621856 WFDC2Q14508 124 aa14.01□□□□□ -0.17
SPAST-204ENST00000621856 LYSTQ99698 3801 aa14.01□□□□□ -0.17
SPAST-204ENST00000621856 Q6ZRP5 223 aa14.01□□□□□ -0.17
SPAST-204ENST00000621856 WWC2-AS2Q96NR7 200 aa14.01□□□□□ -0.17
SPAST-204ENST00000621856 STARD9Q9P2P6 4700 aa14.01□□□□□ -0.17
SPAST-204ENST00000621856 TENM2Q9NT68 2774 aa14.01□□□□□ -0.17
SPAST-204ENST00000621856 M0R2N4 97 aa14□□□□□ -0.17
SPAST-204ENST00000621856 RPL18AQ02543 176 aaKnown RBP14□□□□□ -0.17
SPAST-204ENST00000621856 S100A7L2Q5SY68 101 aa13.98□□□□□ -0.17
SPAST-204ENST00000621856 TMEM126AQ9H061 195 aa13.98□□□□□ -0.17
SPAST-204ENST00000621856 PRO0461Q9UI25 63 aa13.98□□□□□ -0.17
SPAST-204ENST00000621856 TLX1NBP0CAT3 122 aa13.98□□□□□ -0.17
SPAST-204ENST00000621856 C14orf177Q52M58 125 aa13.97□□□□□ -0.17
SPAST-204ENST00000621856 TRBV10-2A0A0K0K1G8 114 aa13.96□□□□□ -0.17
SPAST-204ENST00000621856 LST1O00453 97 aa13.96□□□□□ -0.17
SPAST-204ENST00000621856 LINC01620Q4KN68 170 aa13.96□□□□□ -0.17
SPAST-204ENST00000621856 C9JAW5 83 aa13.95□□□□□ -0.18
SPAST-204ENST00000621856 VPS13DQ5THJ4 4388 aa13.95□□□□□ -0.18
SPAST-204ENST00000621856 VPREB1P12018 145 aa13.94□□□□□ -0.18
SPAST-204ENST00000621856 C9orf129Q5T035 196 aaKnown RBP13.93□□□□□ -0.18
SPAST-204ENST00000621856 LOC107984640A0A0U1RRK4 108 aa13.92□□□□□ -0.18
SPAST-204ENST00000621856 Q6ZRN7 208 aaPredicted RBP13.92□□□□□ -0.18
SPAST-204ENST00000621856 SMCPP49901 116 aaPredicted RBP13.91□□□□□ -0.18
SPAST-204ENST00000621856 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.9□□□□□ -0.18
SPAST-204ENST00000621856 H0YGX0 51 aa13.9□□□□□ -0.18
SPAST-204ENST00000621856 SLC25A20O43772 301 aa13.9□□□□□ -0.18
SPAST-204ENST00000621856 CNBPP62633 177 aaKnown RBP13.9□□□□□ -0.18
SPAST-204ENST00000621856 GAGE2BQ13066 116 aa13.9□□□□□ -0.18
SPAST-204ENST00000621856 IGLV6-57P01721 117 aa13.9□□□□□ -0.18
SPAST-204ENST00000621856 M0R378 163 aa13.89□□□□□ -0.19
SPAST-204ENST00000621856 LY6G6CO95867 125 aa13.89□□□□□ -0.19
SPAST-204ENST00000621856 FAM218AQ96MZ4 157 aa13.89□□□□□ -0.19
SPAST-204ENST00000621856 TRBV10-3A0A0K0K1G6 114 aa13.88□□□□□ -0.19
SPAST-204ENST00000621856 LRCOL1A6NCL2 159 aa13.88□□□□□ -0.19
SPAST-204ENST00000621856 DNAH10Q8IVF4 4471 aa13.87□□□□□ -0.19
SPAST-204ENST00000621856 ETDBQ3ZM63 59 aa13.87□□□□□ -0.19
SPAST-204ENST00000621856 Q6ZR54 194 aa13.87□□□□□ -0.19
SPAST-204ENST00000621856 TRACP01848 142 aa13.86□□□□□ -0.19
SPAST-204ENST00000621856 NKAPP1Q8N9T2 125 aa13.86□□□□□ -0.19
SPAST-204ENST00000621856 TGP01266 2768 aa13.85□□□□□ -0.19
SPAST-204ENST00000621856 C6orf99Q4VX62 202 aa13.85□□□□□ -0.19
SPAST-204ENST00000621856 SERTAD4-AS1Q5TG53 156 aa13.84□□□□□ -0.19
SPAST-204ENST00000621856 ANKRD29Q8N6D5 301 aa13.84□□□□□ -0.19
SPAST-204ENST00000621856 PLA2G2DQ9UNK4 145 aa13.84□□□□□ -0.19
SPAST-204ENST00000621856 TRAV23DV6A0A075B6W5 121 aa13.84□□□□□ -0.19
SPAST-204ENST00000621856 A0A087WYN8 130 aa13.84□□□□□ -0.19
SPAST-204ENST00000621856 C3orf84H3BNL1 204 aa13.83□□□□□ -0.2
SPAST-204ENST00000621856 OCIAD2Q56VL3 154 aa13.82□□□□□ -0.2
SPAST-204ENST00000621856 LINC00476Q8WZB0 136 aa13.82□□□□□ -0.2
SPAST-204ENST00000621856 M0QXV9 152 aa13.81□□□□□ -0.2
SPAST-204ENST00000621856 H3BT86 120 aa13.81□□□□□ -0.2
SPAST-204ENST00000621856 FAM168BA1KXE4 195 aa13.8□□□□□ -0.2
SPAST-204ENST00000621856 DNAL4O96015 105 aa13.8□□□□□ -0.2
SPAST-204ENST00000621856 DIRC1Q969H9 104 aa13.79□□□□□ -0.2
SPAST-204ENST00000621856 CBY1Q9Y3M2 126 aa13.79□□□□□ -0.2
SPAST-204ENST00000621856 TEN1Q86WV5 123 aa13.78□□□□□ -0.2
SPAST-204ENST00000621856 Q8N814 137 aa13.78□□□□□ -0.2
SPAST-204ENST00000621856 IGLV5-37A0A075B6J1 123 aa13.78□□□□□ -0.2
SPAST-204ENST00000621856 A0A096LNI7 61 aa13.78□□□□□ -0.2
SPAST-204ENST00000621856 C1orf134Q5TEV5 83 aa13.78□□□□□ -0.2
SPAST-204ENST00000621856 A0A087WTM6 91 aa13.77□□□□□ -0.21
SPAST-204ENST00000621856 C16orf90A8MZG2 172 aa13.77□□□□□ -0.21
SPAST-204ENST00000621856 FAM19A5Q7Z5A7 132 aaPredicted RBP13.77□□□□□ -0.21
SPAST-204ENST00000621856 C7orf33Q8WU49 177 aa13.77□□□□□ -0.21
SPAST-204ENST00000621856 LINC01600Q96MT4 127 aa13.77□□□□□ -0.21
SPAST-204ENST00000621856 IGKV2-24A0A0C4DH68 120 aa13.76□□□□□ -0.21
SPAST-204ENST00000621856 K7ERU9 68 aa13.76□□□□□ -0.21
SPAST-204ENST00000621856 ZNF73O43830 326 aaPredicted RBP13.76□□□□□ -0.21
SPAST-204ENST00000621856 C9orf163Q8N9P6 203 aa13.76□□□□□ -0.21
SPAST-204ENST00000621856 PKIGQ9Y2B9 76 aa13.76□□□□□ -0.21
SPAST-204ENST00000621856 A0A1B0GX51 115 aa13.74□□□□□ -0.21
SPAST-204ENST00000621856 SNCGO76070 127 aa13.74□□□□□ -0.21
SPAST-204ENST00000621856 BAALC-AS2P0C853 105 aa13.74□□□□□ -0.21
SPAST-204ENST00000621856 C22orf24Q9Y442 160 aa13.73□□□□□ -0.21
SPAST-204ENST00000621856 KRTAP7-1Q8IUC3 87 aa13.73□□□□□ -0.21
SPAST-204ENST00000621856 COX7BP24311 80 aa13.72□□□□□ -0.21
SPAST-204ENST00000621856 LINC00575Q6W349 94 aa13.72□□□□□ -0.21
SPAST-204ENST00000621856 PPDPFLQ8WWR9 84 aa13.72□□□□□ -0.21
SPAST-204ENST00000621856 MRPL55Q7Z7F7 128 aaKnown RBP13.7□□□□□ -0.22
SPAST-204ENST00000621856 TRBV7-6A0A0J9YX20 115 aa13.7□□□□□ -0.22
SPAST-204ENST00000621856 LINC00167Q96N53 147 aa13.7□□□□□ -0.22
SPAST-204ENST00000621856 RPL37AP8A6NKH3 93 aa13.69□□□□□ -0.22
SPAST-204ENST00000621856 J3QR89 54 aa13.69□□□□□ -0.22
SPAST-204ENST00000621856 KCNQ1DNQ9H478 68 aa13.69□□□□□ -0.22
SPAST-204ENST00000621856 hADV29S1A0JD25 119 aa13.68□□□□□ -0.22
SPAST-204ENST00000621856 CHTF8P0CG12 524 aa13.68□□□□□ -0.22
SPAST-204ENST00000621856 ALMS1Q8TCU4 4167 aa13.68□□□□□ -0.22
SPAST-204ENST00000621856 ELOF1P60002 83 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms