RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ANAPC11Q9NYG5 84 aa10.15□□□□□ -0.78
HMGN3-203ENST00000620514 TMEM238C9JI98 176 aa10.13□□□□□ -0.79
HMGN3-203ENST00000620514 FAM19A2Q8N3H0 131 aa10.13□□□□□ -0.79
HMGN3-203ENST00000620514 A0A0U1RRA0 63 aa10.12□□□□□ -0.79
HMGN3-203ENST00000620514 RPL24P83731 157 aaKnown RBP10.12□□□□□ -0.79
HMGN3-203ENST00000620514 SFTA2Q6UW10 78 aa10.12□□□□□ -0.79
HMGN3-203ENST00000620514 TSPAN13O95857 204 aa10.11□□□□□ -0.79
HMGN3-203ENST00000620514 CRYGAP11844 174 aa10.11□□□□□ -0.79
HMGN3-203ENST00000620514 LINC00158P58513 81 aa10.11□□□□□ -0.79
HMGN3-203ENST00000620514 PRLHP81277 87 aa10.11□□□□□ -0.79
HMGN3-203ENST00000620514 TMEM126AQ9H061 195 aa10.11□□□□□ -0.79
HMGN3-203ENST00000620514 HSBP1O75506 76 aa10.1□□□□□ -0.79
HMGN3-203ENST00000620514 PRR4Q16378 134 aa10.1□□□□□ -0.79
HMGN3-203ENST00000620514 FAM19A1Q7Z5A9 133 aa10.1□□□□□ -0.79
HMGN3-203ENST00000620514 TYMSOSQ8TAI1 123 aa10.1□□□□□ -0.79
HMGN3-203ENST00000620514 M0R378 163 aa10.09□□□□□ -0.79
HMGN3-203ENST00000620514 TRGC2P03986 189 aa10.09□□□□□ -0.79
HMGN3-203ENST00000620514 KRTAP13-2Q52LG2 175 aa10.09□□□□□ -0.79
HMGN3-203ENST00000620514 H0Y8G0 127 aa10.07□□□□□ -0.8
HMGN3-203ENST00000620514 SMIM13P0DJ93 91 aa10.07□□□□□ -0.8
HMGN3-203ENST00000620514 LINC00310P59036 64 aa10.07□□□□□ -0.8
HMGN3-203ENST00000620514 SERF1AO75920 110 aa10.05□□□□□ -0.8
HMGN3-203ENST00000620514 MEIG1Q5JSS6 88 aa10.05□□□□□ -0.8
HMGN3-203ENST00000620514 SLC7A5P1Q8MH63 180 aa10.05□□□□□ -0.8
HMGN3-203ENST00000620514 FAM229BQ4G0N7 80 aa10.04□□□□□ -0.8
HMGN3-203ENST00000620514 ATP6V1G1O75348 118 aa10.03□□□□□ -0.8
HMGN3-203ENST00000620514 LEPROTL1O95214 131 aa10.03□□□□□ -0.8
HMGN3-203ENST00000620514 MIR7-3HGQ8N6C7 128 aa10.03□□□□□ -0.8
HMGN3-203ENST00000620514 NDUFA12Q9UI09 145 aa10.03□□□□□ -0.8
HMGN3-203ENST00000620514 TSPEAR-AS2P59090 65 aa10.02□□□□□ -0.81
HMGN3-203ENST00000620514 BOD1L2Q8IYS8 172 aa10.02□□□□□ -0.81
HMGN3-203ENST00000620514 NCR3O14931 201 aa10.01□□□□□ -0.81
HMGN3-203ENST00000620514 HERV-K104P63124 156 aa10.01□□□□□ -0.81
HMGN3-203ENST00000620514 PLEKHB2Q96CS7 222 aa10.01□□□□□ -0.81
HMGN3-203ENST00000620514 HIGD2AQ9BW72 106 aa10.01□□□□□ -0.81
HMGN3-203ENST00000620514 FABP4P15090 132 aa10□□□□□ -0.81
HMGN3-203ENST00000620514 IGKV2D-26A0A0A0MRZ7 120 aa9.99□□□□□ -0.81
HMGN3-203ENST00000620514 MYMXA0A1B0GTQ4 84 aa9.99□□□□□ -0.81
HMGN3-203ENST00000620514 COLCA2A8K830 154 aa9.99□□□□□ -0.81
HMGN3-203ENST00000620514 PMCHL2Q9BQD1 86 aa9.99□□□□□ -0.81
HMGN3-203ENST00000620514 LEPROTO15243 131 aa9.98□□□□□ -0.81
HMGN3-203ENST00000620514 LINC00304Q8N9R0 145 aa9.98□□□□□ -0.81
HMGN3-203ENST00000620514 C3orf22Q8N5N4 141 aa9.97□□□□□ -0.81
HMGN3-203ENST00000620514 LINC00587B1AMM8 73 aa9.96□□□□□ -0.82
HMGN3-203ENST00000620514 PRYO14603 147 aa9.96□□□□□ -0.82
HMGN3-203ENST00000620514 PLNP26678 52 aa9.96□□□□□ -0.82
HMGN3-203ENST00000620514 DAND5Q8N907 189 aa9.96□□□□□ -0.82
HMGN3-203ENST00000620514 RETNLBQ9BQ08 111 aa9.96□□□□□ -0.82
HMGN3-203ENST00000620514 HSPB8Q9UJY1 196 aa9.96□□□□□ -0.82
HMGN3-203ENST00000620514 DPM2O94777 84 aa9.95□□□□□ -0.82
HMGN3-203ENST00000620514 SPRR4Q96PI1 79 aa9.95□□□□□ -0.82
HMGN3-203ENST00000620514 MAP1LC3CQ9BXW4 147 aa9.95□□□□□ -0.82
HMGN3-203ENST00000620514 TRBV10-3A0A0K0K1G6 114 aa9.94□□□□□ -0.82
HMGN3-203ENST00000620514 J3QQQ9 107 aa9.94□□□□□ -0.82
HMGN3-203ENST00000620514 SPRR1AP35321 89 aa9.94□□□□□ -0.82
HMGN3-203ENST00000620514 KCNQ1DNQ9H478 68 aa9.94□□□□□ -0.82
HMGN3-203ENST00000620514 IGKCP01834 107 aa9.93□□□□□ -0.82
HMGN3-203ENST00000620514 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
HMGN3-203ENST00000620514 LINC00337Q8N6G1 96 aa9.92□□□□□ -0.82
HMGN3-203ENST00000620514 HERVK_113P61574 105 aa9.91□□□□□ -0.82
HMGN3-203ENST00000620514 SMCR5Q8TEV8 140 aa9.91□□□□□ -0.82
HMGN3-203ENST00000620514 LOC107984156A0A0G2JMH3 177 aa9.9□□□□□ -0.82
HMGN3-203ENST00000620514 ETDCA0A1B0GVM5 59 aa9.9□□□□□ -0.82
HMGN3-203ENST00000620514 LGALS3P17931 250 aaKnown RBP9.9□□□□□ -0.82
HMGN3-203ENST00000620514 ARL17AQ8IVW1 177 aa9.9□□□□□ -0.82
HMGN3-203ENST00000620514 ZNF706Q9Y5V0 76 aaPredicted RBP9.89□□□□□ -0.83
HMGN3-203ENST00000620514 NMUP48645 174 aa9.88□□□□□ -0.83
HMGN3-203ENST00000620514 PPDPFQ9H3Y8 114 aa9.88□□□□□ -0.83
HMGN3-203ENST00000620514 MUC2Q02817 5179 aa9.87□□□□□ -0.83
HMGN3-203ENST00000620514 TRBV10-2A0A0K0K1G8 114 aa9.86□□□□□ -0.83
HMGN3-203ENST00000620514 B5MCH6 92 aa9.86□□□□□ -0.83
HMGN3-203ENST00000620514 DDTP30046 118 aa9.86□□□□□ -0.83
HMGN3-203ENST00000620514 EIF4EBP3O60516 100 aaPredicted RBP9.85□□□□□ -0.83
HMGN3-203ENST00000620514 HIST1H2BKO60814 126 aa9.85□□□□□ -0.83
HMGN3-203ENST00000620514 HIST1H2BJP06899 126 aa9.85□□□□□ -0.83
HMGN3-203ENST00000620514 HIST1H2BOP23527 126 aa9.85□□□□□ -0.83
HMGN3-203ENST00000620514 HIST1H2BBP33778 126 aa9.85□□□□□ -0.83
HMGN3-203ENST00000620514 HIST1H2BDP58876 126 aa9.85□□□□□ -0.83
HMGN3-203ENST00000620514 HIST1H2BCP62807 126 aa9.85□□□□□ -0.83
HMGN3-203ENST00000620514 HIST2H2BEQ16778 126 aa9.85□□□□□ -0.83
HMGN3-203ENST00000620514 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.85□□□□□ -0.83
HMGN3-203ENST00000620514 LCE2AQ5TA79 106 aaPredicted RBP9.85□□□□□ -0.83
HMGN3-203ENST00000620514 SOSTDC1Q6X4U4 206 aa9.85□□□□□ -0.83
HMGN3-203ENST00000620514 HIST1H2BHQ93079 126 aa9.85□□□□□ -0.83
HMGN3-203ENST00000620514 HIST1H2BNQ99877 126 aa9.85□□□□□ -0.83
HMGN3-203ENST00000620514 HIST1H2BMQ99879 126 aa9.85□□□□□ -0.83
HMGN3-203ENST00000620514 A0A0J9YXY3 114 aa9.84□□□□□ -0.83
HMGN3-203ENST00000620514 E9PLD3 99 aa9.84□□□□□ -0.83
HMGN3-203ENST00000620514 ERC2-IT1O76042 136 aa9.84□□□□□ -0.83
HMGN3-203ENST00000620514 NPC2P61916 151 aa9.84□□□□□ -0.83
HMGN3-203ENST00000620514 S100A12P80511 92 aa9.84□□□□□ -0.83
HMGN3-203ENST00000620514 ADAMTSL4-AS1Q5T5F5 129 aa9.84□□□□□ -0.83
HMGN3-203ENST00000620514 MIEN1Q9BRT3 115 aa9.84□□□□□ -0.83
HMGN3-203ENST00000620514 SPANXB1Q9NS25 103 aaPredicted RBP9.84□□□□□ -0.83
HMGN3-203ENST00000620514 SYS1-DBNDD2H3BUS1 97 aa9.83□□□□□ -0.84
HMGN3-203ENST00000620514 CTAG1AP78358 180 aa9.83□□□□□ -0.84
HMGN3-203ENST00000620514 IGLV7-46A0A075B6I9 117 aa9.82□□□□□ -0.84
HMGN3-203ENST00000620514 NDUFC2O95298 119 aa9.82□□□□□ -0.84
HMGN3-203ENST00000620514 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
HMGN3-203ENST00000620514 GAGE2AQ6NT46 116 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms