RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 Q6ZRP5 223 aa4.51□□□□□ -1.69
PSMB3-212ENST00000620309 C14orf144Q96I85 54 aa4.51□□□□□ -1.69
PSMB3-212ENST00000620309 SMIM13P0DJ93 91 aa4.5□□□□□ -1.69
PSMB3-212ENST00000620309 PTTG1IPP53801 180 aa4.5□□□□□ -1.69
PSMB3-212ENST00000620309 XGP55808 180 aa4.5□□□□□ -1.69
PSMB3-212ENST00000620309 CIRBPQ14011 172 aaKnown RBP4.5□□□□□ -1.69
PSMB3-212ENST00000620309 MEIG1Q5JSS6 88 aa4.5□□□□□ -1.69
PSMB3-212ENST00000620309 SLC25A34Q6PIV7 304 aa4.5□□□□□ -1.69
PSMB3-212ENST00000620309 SCGB1D4Q6XE38 83 aa4.5□□□□□ -1.69
PSMB3-212ENST00000620309 SDIM1Q6ZPB5 146 aa4.5□□□□□ -1.69
PSMB3-212ENST00000620309 LINC00528Q8N1L1 170 aa4.5□□□□□ -1.69
PSMB3-212ENST00000620309 CIRBP-AS1Q8TBR5 109 aa4.5□□□□□ -1.69
PSMB3-212ENST00000620309 SPACA4Q8TDM5 124 aa4.5□□□□□ -1.69
PSMB3-212ENST00000620309 LINC00587B1AMM8 73 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 TMEM238C9JI98 176 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 PANO1I0J062 215 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 SMR3BP02814 79 aaPredicted RBP4.49□□□□□ -1.69
PSMB3-212ENST00000620309 CHTF8P0CG12 524 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 PFN2P35080 140 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 HAMPP81172 84 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 GAGE2BQ13066 116 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 C9orf129Q5T035 196 aaKnown RBP4.49□□□□□ -1.69
PSMB3-212ENST00000620309 ADAMTSL4-AS1Q5T5F5 129 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 MIR7-3HGQ8N6C7 128 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 DAND5Q8N907 189 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 SPANXDQ9BXN6 97 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 SPANXB1Q9NS25 103 aaPredicted RBP4.49□□□□□ -1.69
PSMB3-212ENST00000620309 SPANXCQ9NY87 97 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 FAM30AQ9NZY2 134 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 HIGD1BQ9P298 99 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 UQCR10Q9UDW1 63 aa4.49□□□□□ -1.69
PSMB3-212ENST00000620309 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.49□□□□□ -1.69
PSMB3-212ENST00000620309 A0A0U1RRA0 63 aa4.48□□□□□ -1.69
PSMB3-212ENST00000620309 EIF4EBP3O60516 100 aaPredicted RBP4.48□□□□□ -1.69
PSMB3-212ENST00000620309 RPL37AP61513 92 aaKnown RBP4.48□□□□□ -1.69
PSMB3-212ENST00000620309 SOSTDC1Q6X4U4 206 aa4.48□□□□□ -1.69
PSMB3-212ENST00000620309 PPDPFQ9H3Y8 114 aa4.48□□□□□ -1.69
PSMB3-212ENST00000620309 SND1-IT1Q9HBX3 110 aa4.48□□□□□ -1.69
PSMB3-212ENST00000620309 TNXBP22105 4242 aa4.47□□□□□ -1.69
PSMB3-212ENST00000620309 A0A087WYN8 130 aa4.47□□□□□ -1.69
PSMB3-212ENST00000620309 LOC107984156A0A0G2JMH3 177 aa4.47□□□□□ -1.69
PSMB3-212ENST00000620309 LINC00158P58513 81 aa4.47□□□□□ -1.69
PSMB3-212ENST00000620309 LRP2P98164 4655 aa4.47□□□□□ -1.69
PSMB3-212ENST00000620309 GAGE2EQ4V326 116 aa4.47□□□□□ -1.69
PSMB3-212ENST00000620309 KRTAP7-1Q8IUC3 87 aa4.47□□□□□ -1.69
PSMB3-212ENST00000620309 ARL17AQ8IVW1 177 aa4.47□□□□□ -1.69
PSMB3-212ENST00000620309 Q8NDZ9 215 aa4.47□□□□□ -1.69
PSMB3-212ENST00000620309 PRO1933Q9H354 126 aa4.47□□□□□ -1.69
PSMB3-212ENST00000620309 XAGE1AQ9HD64 81 aa4.47□□□□□ -1.69
PSMB3-212ENST00000620309 GAGE2DQ9UEU5 116 aa4.47□□□□□ -1.69
PSMB3-212ENST00000620309 TSTD3H0UI37 97 aa4.46□□□□□ -1.7
PSMB3-212ENST00000620309 Q6ZVH6 145 aa4.46□□□□□ -1.7
PSMB3-212ENST00000620309 LINC00308Q8TCZ7 52 aa4.46□□□□□ -1.7
PSMB3-212ENST00000620309 MIEN1Q9BRT3 115 aa4.46□□□□□ -1.7
PSMB3-212ENST00000620309 PLAC8Q9NZF1 115 aa4.46□□□□□ -1.7
PSMB3-212ENST00000620309 PLA2G2DQ9UNK4 145 aa4.46□□□□□ -1.7
PSMB3-212ENST00000620309 IGLV5-37A0A075B6J1 123 aa4.45□□□□□ -1.7
PSMB3-212ENST00000620309 FAM168BA1KXE4 195 aa4.45□□□□□ -1.7
PSMB3-212ENST00000620309 VPREB1P12018 145 aa4.45□□□□□ -1.7
PSMB3-212ENST00000620309 HNRNPA3P51991 378 aaKnown RBP4.45□□□□□ -1.7
PSMB3-212ENST00000620309 NPC2P61916 151 aa4.45□□□□□ -1.7
PSMB3-212ENST00000620309 SERTAD4-AS1Q5TG53 156 aa4.45□□□□□ -1.7
PSMB3-212ENST00000620309 IFITM1P13164 125 aa4.44□□□□□ -1.7
PSMB3-212ENST00000620309 HSD52Q0P140 79 aa4.44□□□□□ -1.7
PSMB3-212ENST00000620309 TAL2Q16559 108 aa4.44□□□□□ -1.7
PSMB3-212ENST00000620309 A0A1W2PNN7 141 aa4.43□□□□□ -1.7
PSMB3-212ENST00000620309 M0QXV9 152 aa4.43□□□□□ -1.7
PSMB3-212ENST00000620309 NDUFC2O95298 119 aa4.43□□□□□ -1.7
PSMB3-212ENST00000620309 DDTP30046 118 aa4.43□□□□□ -1.7
PSMB3-212ENST00000620309 UBE2BP63146 152 aa4.43□□□□□ -1.7
PSMB3-212ENST00000620309 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
PSMB3-212ENST00000620309 COPS9Q8WXC6 57 aa4.43□□□□□ -1.7
PSMB3-212ENST00000620309 IGKV2-28A0A075B6P5 120 aa4.42□□□□□ -1.7
PSMB3-212ENST00000620309 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
PSMB3-212ENST00000620309 IGKV2D-28P01615 120 aa4.42□□□□□ -1.7
PSMB3-212ENST00000620309 FXYD2P54710 66 aa4.42□□□□□ -1.7
PSMB3-212ENST00000620309 SRSF9Q13242 221 aaKnown RBP eCLIP4.42□□□□□ -1.7
PSMB3-212ENST00000620309 LBHQ53QV2 105 aaPredicted RBP4.42□□□□□ -1.7
PSMB3-212ENST00000620309 MUSTN1Q8IVN3 82 aa4.42□□□□□ -1.7
PSMB3-212ENST00000620309 CEND1Q8N111 149 aa4.42□□□□□ -1.7
PSMB3-212ENST00000620309 NKAPP1Q8N9T2 125 aa4.42□□□□□ -1.7
PSMB3-212ENST00000620309 HIST1H4GQ99525 98 aa4.42□□□□□ -1.7
PSMB3-212ENST00000620309 TRBV10-2A0A0K0K1G8 114 aa4.41□□□□□ -1.7
PSMB3-212ENST00000620309 A4D1N5 150 aa4.41□□□□□ -1.7
PSMB3-212ENST00000620309 NCR3O14931 201 aa4.41□□□□□ -1.7
PSMB3-212ENST00000620309 RPL24P83731 157 aaKnown RBP4.41□□□□□ -1.7
PSMB3-212ENST00000620309 J3QL48 77 aa4.4□□□□□ -1.71
PSMB3-212ENST00000620309 PRR3P79522 188 aaKnown RBP4.4□□□□□ -1.71
PSMB3-212ENST00000620309 PHF5AQ7RTV0 110 aaKnown RBP4.4□□□□□ -1.71
PSMB3-212ENST00000620309 MRPL55Q7Z7F7 128 aaKnown RBP4.4□□□□□ -1.71
PSMB3-212ENST00000620309 LINC00337Q8N6G1 96 aa4.4□□□□□ -1.71
PSMB3-212ENST00000620309 C22orf24Q9Y442 160 aa4.4□□□□□ -1.71
PSMB3-212ENST00000620309 A0A0B4J2C4 111 aa4.39□□□□□ -1.71
PSMB3-212ENST00000620309 A0A1B0GWB2 263 aa4.39□□□□□ -1.71
PSMB3-212ENST00000620309 IGLV6-57P01721 117 aa4.39□□□□□ -1.71
PSMB3-212ENST00000620309 CTAG1AP78358 180 aa4.39□□□□□ -1.71
PSMB3-212ENST00000620309 BVES-AS1Q5T3Y7 98 aa4.39□□□□□ -1.71
PSMB3-212ENST00000620309 REG3GQ6UW15 175 aa4.39□□□□□ -1.71
PSMB3-212ENST00000620309 KRTAP11-1Q8IUC1 163 aa4.39□□□□□ -1.71
PSMB3-212ENST00000620309 TRBV10-3A0A0K0K1G6 114 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms