RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 IGLV5-52A0A0A0MRZ9 124 aa11.3□□□□□ -0.6
SREK1-216ENST00000612404 TMEM238LA0A1B0GVL6 79 aa11.3□□□□□ -0.6
SREK1-216ENST00000612404 A6NJY4 79 aa11.3□□□□□ -0.6
SREK1-216ENST00000612404 SNHG12Q9BXW3 62 aa11.3□□□□□ -0.6
SREK1-216ENST00000612404 NHP2Q9NX24 153 aaKnown RBP11.29□□□□□ -0.6
SREK1-216ENST00000612404 RYR3Q15413 4870 aa11.28□□□□□ -0.6
SREK1-216ENST00000612404 LOC107984156A0A0G2JMH3 177 aa11.27□□□□□ -0.6
SREK1-216ENST00000612404 LINC00336Q6ZUF6 198 aa11.27□□□□□ -0.6
SREK1-216ENST00000612404 ARL17AQ8IVW1 177 aa11.27□□□□□ -0.6
SREK1-216ENST00000612404 PPDPFQ9H3Y8 114 aa11.27□□□□□ -0.6
SREK1-216ENST00000612404 PKD1P98161 4303 aa11.27□□□□□ -0.6
SREK1-216ENST00000612404 IGKV2-24A0A0C4DH68 120 aa11.27□□□□□ -0.61
SREK1-216ENST00000612404 KRTAP10-2P60368 255 aa11.27□□□□□ -0.61
SREK1-216ENST00000612404 C9orf129Q5T035 196 aaKnown RBP11.27□□□□□ -0.61
SREK1-216ENST00000612404 A0A096LNI7 61 aa11.26□□□□□ -0.61
SREK1-216ENST00000612404 A0A1B0GV90 55 aa11.26□□□□□ -0.61
SREK1-216ENST00000612404 A6NDN8 102 aa11.26□□□□□ -0.61
SREK1-216ENST00000612404 SDIM1Q6ZPB5 146 aa11.26□□□□□ -0.61
SREK1-216ENST00000612404 PKIGQ9Y2B9 76 aa11.26□□□□□ -0.61
SREK1-216ENST00000612404 C16orf90A8MZG2 172 aa11.25□□□□□ -0.61
SREK1-216ENST00000612404 K7ERJ3 54 aa11.24□□□□□ -0.61
SREK1-216ENST00000612404 CFC1BP0CG36 223 aa11.24□□□□□ -0.61
SREK1-216ENST00000612404 CFC1P0CG37 223 aa11.24□□□□□ -0.61
SREK1-216ENST00000612404 Q8NDZ9 215 aa11.24□□□□□ -0.61
SREK1-216ENST00000612404 PRR3P79522 188 aaKnown RBP11.24□□□□□ -0.61
SREK1-216ENST00000612404 RAB37Q96AX2 223 aa11.23□□□□□ -0.61
SREK1-216ENST00000612404 DNAH5Q8TE73 4624 aa11.23□□□□□ -0.61
SREK1-216ENST00000612404 CHTF8P0CG12 524 aa11.23□□□□□ -0.61
SREK1-216ENST00000612404 PGPEP1Q9NXJ5 209 aa11.23□□□□□ -0.61
SREK1-216ENST00000612404 NDUFC2O95298 119 aa11.22□□□□□ -0.61
SREK1-216ENST00000612404 NCR3O14931 201 aa11.21□□□□□ -0.61
SREK1-216ENST00000612404 IGKV2-28A0A075B6P5 120 aa11.21□□□□□ -0.62
SREK1-216ENST00000612404 FAM168BA1KXE4 195 aa11.21□□□□□ -0.62
SREK1-216ENST00000612404 IGKV2D-28P01615 120 aa11.21□□□□□ -0.62
SREK1-216ENST00000612404 A0A0B4J2C4 111 aa11.2□□□□□ -0.62
SREK1-216ENST00000612404 A0A1B0GWB2 263 aa11.2□□□□□ -0.62
SREK1-216ENST00000612404 SERTAD4-AS1Q5TG53 156 aa11.2□□□□□ -0.62
SREK1-216ENST00000612404 VPREB1P12018 145 aa11.19□□□□□ -0.62
SREK1-216ENST00000612404 COL5A1-AS1Q5SY13 56 aa11.19□□□□□ -0.62
SREK1-216ENST00000612404 DPH3Q96FX2 82 aa11.19□□□□□ -0.62
SREK1-216ENST00000612404 LINC00474Q9P2X8 69 aa11.19□□□□□ -0.62
SREK1-216ENST00000612404 FAM19A5Q7Z5A7 132 aaPredicted RBP11.18□□□□□ -0.62
SREK1-216ENST00000612404 LINC00337Q8N6G1 96 aa11.18□□□□□ -0.62
SREK1-216ENST00000612404 PRO1854Q9UHT4 67 aa11.18□□□□□ -0.62
SREK1-216ENST00000612404 PKHD1P08F94 4074 aa11.18□□□□□ -0.62
SREK1-216ENST00000612404 NKAPP1Q8N9T2 125 aa11.18□□□□□ -0.62
SREK1-216ENST00000612404 OR13C6PQ8NH95 151 aa11.18□□□□□ -0.62
SREK1-216ENST00000612404 H7C2G1 150 aa11.17□□□□□ -0.62
SREK1-216ENST00000612404 TRAV13-2A0A0B4J235 113 aa11.17□□□□□ -0.62
SREK1-216ENST00000612404 PANO1I0J062 215 aa11.17□□□□□ -0.62
SREK1-216ENST00000612404 PLA2G2DQ9UNK4 145 aa11.17□□□□□ -0.62
SREK1-216ENST00000612404 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.17□□□□□ -0.62
SREK1-216ENST00000612404 RPL13AP40429 203 aaKnown RBP11.16□□□□□ -0.62
SREK1-216ENST00000612404 A0A1W2PNN7 141 aa11.15□□□□□ -0.62
SREK1-216ENST00000612404 S100A7L2Q5SY68 101 aa11.15□□□□□ -0.62
SREK1-216ENST00000612404 TRBV10-2A0A0K0K1G8 114 aa11.14□□□□□ -0.63
SREK1-216ENST00000612404 KRTAP7-1Q8IUC3 87 aa11.14□□□□□ -0.63
SREK1-216ENST00000612404 SPACA4Q8TDM5 124 aa11.14□□□□□ -0.63
SREK1-216ENST00000612404 M0R378 163 aa11.14□□□□□ -0.63
SREK1-216ENST00000612404 Q1RN00 199 aa11.14□□□□□ -0.63
SREK1-216ENST00000612404 GAGE10A6NGK3 116 aa11.13□□□□□ -0.63
SREK1-216ENST00000612404 A0A1B0GVY2 172 aa11.12□□□□□ -0.63
SREK1-216ENST00000612404 C22orf24Q9Y442 160 aa11.12□□□□□ -0.63
SREK1-216ENST00000612404 TAX1BP3O14907 124 aa11.12□□□□□ -0.63
SREK1-216ENST00000612404 IGLV5-37A0A075B6J1 123 aa11.11□□□□□ -0.63
SREK1-216ENST00000612404 NAA38Q9BRA0 125 aaKnown RBP11.11□□□□□ -0.63
SREK1-216ENST00000612404 TMEM126AQ9H061 195 aa11.11□□□□□ -0.63
SREK1-216ENST00000612404 M0QXV9 152 aa11.11□□□□□ -0.63
SREK1-216ENST00000612404 TSPAN13O95857 204 aa11.11□□□□□ -0.63
SREK1-216ENST00000612404 KRTAP10-1P60331 282 aa11.11□□□□□ -0.63
SREK1-216ENST00000612404 TRBV10-3A0A0K0K1G6 114 aa11.1□□□□□ -0.63
SREK1-216ENST00000612404 C7orf33Q8WU49 177 aa11.1□□□□□ -0.63
SREK1-216ENST00000612404 MRPL55Q7Z7F7 128 aaKnown RBP11.09□□□□□ -0.63
SREK1-216ENST00000612404 A0A087WYN8 130 aa11.09□□□□□ -0.63
SREK1-216ENST00000612404 IGLV6-57P01721 117 aa11.09□□□□□ -0.63
SREK1-216ENST00000612404 RPL37AP8A6NKH3 93 aa11.08□□□□□ -0.64
SREK1-216ENST00000612404 LINC00167Q96N53 147 aa11.08□□□□□ -0.64
SREK1-216ENST00000612404 H3BUT2 72 aa11.07□□□□□ -0.64
SREK1-216ENST00000612404 FAM30AQ9NZY2 134 aa11.07□□□□□ -0.64
SREK1-216ENST00000612404 DNAH8Q96JB1 4490 aa11.07□□□□□ -0.64
SREK1-216ENST00000612404 C9orf118A6NHY6 69 aa11.06□□□□□ -0.64
SREK1-216ENST00000612404 PSMB2P49721 201 aa11.06□□□□□ -0.64
SREK1-216ENST00000612404 SMIM11BQ8TCY0 68 aa11.06□□□□□ -0.64
SREK1-216ENST00000612404 PHF5AQ7RTV0 110 aaKnown RBP11.06□□□□□ -0.64
SREK1-216ENST00000612404 TRAV23DV6A0A075B6W5 121 aa11.04□□□□□ -0.64
SREK1-216ENST00000612404 PLAC8Q9NZF1 115 aa11.04□□□□□ -0.64
SREK1-216ENST00000612404 DYNC1H1Q14204 4646 aaKnown RBP11.03□□□□□ -0.64
SREK1-216ENST00000612404 IGLV1-50A0A075B6I6 118 aa11.03□□□□□ -0.64
SREK1-216ENST00000612404 LRP1BQ9NZR2 4599 aa11.03□□□□□ -0.64
SREK1-216ENST00000612404 TRIAP1O43715 76 aa11.02□□□□□ -0.64
SREK1-216ENST00000612404 RPL28P46779 137 aaKnown RBP11.02□□□□□ -0.64
SREK1-216ENST00000612404 UBE2BP63146 152 aa11.02□□□□□ -0.64
SREK1-216ENST00000612404 Q6ZSA8 131 aa11.02□□□□□ -0.64
SREK1-216ENST00000612404 SCGB1C2P0DMR2 95 aa11.01□□□□□ -0.65
SREK1-216ENST00000612404 CBY1Q9Y3M2 126 aa11.01□□□□□ -0.65
SREK1-216ENST00000612404 EPM2AB3EWF7 344 aa11□□□□□ -0.65
SREK1-216ENST00000612404 HAMPP81172 84 aa11□□□□□ -0.65
SREK1-216ENST00000612404 C6orf99Q4VX62 202 aa11□□□□□ -0.65
SREK1-216ENST00000612404 CIRBP-AS1Q8TBR5 109 aa11□□□□□ -0.65
SREK1-216ENST00000612404 KCNQ1DNQ9H478 68 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms