RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 FBN2P35556 2912 aa4.75□□□□□ -1.65
SYNPO2-206ENST00000610556 UBR5O95071 2799 aaPredicted RBP4.75□□□□□ -1.65
SYNPO2-206ENST00000610556 LOC107984640A0A0U1RRK4 108 aa4.75□□□□□ -1.65
SYNPO2-206ENST00000610556 IGHV4-30-4P0DP06 118 aa4.75□□□□□ -1.65
SYNPO2-206ENST00000610556 UBE2BP63146 152 aa4.75□□□□□ -1.65
SYNPO2-206ENST00000610556 KPRPQ5T749 579 aaPredicted RBP4.75□□□□□ -1.65
SYNPO2-206ENST00000610556 ETDCA0A1B0GVM5 59 aa4.75□□□□□ -1.65
SYNPO2-206ENST00000610556 C10orf25Q5T742 122 aa4.75□□□□□ -1.65
SYNPO2-206ENST00000610556 CELA1Q9UNI1 258 aa4.75□□□□□ -1.65
SYNPO2-206ENST00000610556 F8WEM9 126 aa4.75□□□□□ -1.65
SYNPO2-206ENST00000610556 COX17Q14061 63 aa4.75□□□□□ -1.65
SYNPO2-206ENST00000610556 SNURFQ9Y675 71 aa4.75□□□□□ -1.65
SYNPO2-206ENST00000610556 C9orf129Q5T035 196 aaKnown RBP4.74□□□□□ -1.65
SYNPO2-206ENST00000610556 C16orf95Q9H693 158 aa4.74□□□□□ -1.65
SYNPO2-206ENST00000610556 SETXQ7Z333 2677 aaKnown RBP4.74□□□□□ -1.65
SYNPO2-206ENST00000610556 PLAC8L1A1L4L8 177 aa4.74□□□□□ -1.65
SYNPO2-206ENST00000610556 C3orf84H3BNL1 204 aa4.74□□□□□ -1.65
SYNPO2-206ENST00000610556 ZNF73O43830 326 aaPredicted RBP4.74□□□□□ -1.65
SYNPO2-206ENST00000610556 MGAM2Q2M2H8 2515 aa4.74□□□□□ -1.65
SYNPO2-206ENST00000610556 UBE2DNLQ8IWF7 75 aa4.74□□□□□ -1.65
SYNPO2-206ENST00000610556 X6R8D5 127 aa4.73□□□□□ -1.65
SYNPO2-206ENST00000610556 UNC79Q9P2D8 2635 aa4.73□□□□□ -1.65
SYNPO2-206ENST00000610556 PRB2P02812 416 aaPredicted RBP4.73□□□□□ -1.65
SYNPO2-206ENST00000610556 FUSP35637 526 aaKnown RBP eCLIP4.73□□□□□ -1.65
SYNPO2-206ENST00000610556 DEFB131BA0A096LNP1 70 aa4.73□□□□□ -1.65
SYNPO2-206ENST00000610556 PDE6GP18545 87 aa4.73□□□□□ -1.65
SYNPO2-206ENST00000610556 ATP5EP2Q5VTU8 51 aa4.73□□□□□ -1.65
SYNPO2-206ENST00000610556 CSNK1G2-AS1Q8NCQ2 148 aa4.73□□□□□ -1.65
SYNPO2-206ENST00000610556 PPDPFQ9H3Y8 114 aa4.72□□□□□ -1.65
SYNPO2-206ENST00000610556 LINC00575Q6W349 94 aa4.72□□□□□ -1.65
SYNPO2-206ENST00000610556 WFDC10BQ8IUB3 73 aa4.72□□□□□ -1.65
SYNPO2-206ENST00000610556 IL17DQ8TAD2 202 aa4.72□□□□□ -1.65
SYNPO2-206ENST00000610556 C11orf45Q8TAV5 145 aa4.72□□□□□ -1.65
SYNPO2-206ENST00000610556 SYCNQ0VAF6 134 aa4.72□□□□□ -1.65
SYNPO2-206ENST00000610556 C19orf73Q9NVV2 129 aa4.72□□□□□ -1.65
SYNPO2-206ENST00000610556 MAST4O15021 2626 aa4.71□□□□□ -1.65
SYNPO2-206ENST00000610556 RPL37AP8A6NKH3 93 aa4.71□□□□□ -1.65
SYNPO2-206ENST00000610556 BPY2O14599 106 aa4.71□□□□□ -1.65
SYNPO2-206ENST00000610556 NDUFC2O95298 119 aa4.71□□□□□ -1.65
SYNPO2-206ENST00000610556 CUBNO60494 3623 aa4.71□□□□□ -1.65
SYNPO2-206ENST00000610556 CELSR2Q9HCU4 2923 aa4.71□□□□□ -1.66
SYNPO2-206ENST00000610556 IGKV2-24A0A0C4DH68 120 aa4.71□□□□□ -1.66
SYNPO2-206ENST00000610556 Q6ZTC4 211 aa4.71□□□□□ -1.66
SYNPO2-206ENST00000610556 TEP1Q99973 2627 aaKnown RBP4.71□□□□□ -1.66
SYNPO2-206ENST00000610556 NANOS2P60321 138 aaKnown RBP4.71□□□□□ -1.66
SYNPO2-206ENST00000610556 TMEM258P61165 79 aa4.7□□□□□ -1.66
SYNPO2-206ENST00000610556 FAM19A3Q7Z5A8 133 aa4.7□□□□□ -1.66
SYNPO2-206ENST00000610556 FAM236DA0A1B0GTK5 79 aa4.7□□□□□ -1.66
SYNPO2-206ENST00000610556 M0R378 163 aa4.7□□□□□ -1.66
SYNPO2-206ENST00000610556 FAM236CP0DP71 79 aa4.7□□□□□ -1.66
SYNPO2-206ENST00000610556 LYPD5Q6UWN5 251 aa4.69□□□□□ -1.66
SYNPO2-206ENST00000610556 Q6ZVQ6 151 aa4.69□□□□□ -1.66
SYNPO2-206ENST00000610556 FAM19A5Q7Z5A7 132 aaPredicted RBP4.69□□□□□ -1.66
SYNPO2-206ENST00000610556 H3BQ85 93 aa4.69□□□□□ -1.66
SYNPO2-206ENST00000610556 ITPR2Q14571 2701 aa4.69□□□□□ -1.66
SYNPO2-206ENST00000610556 MXRA5Q9NR99 2828 aa4.69□□□□□ -1.66
SYNPO2-206ENST00000610556 NOTCH1P46531 2555 aa4.69□□□□□ -1.66
SYNPO2-206ENST00000610556 A0A0J9YWU9 116 aa4.68□□□□□ -1.66
SYNPO2-206ENST00000610556 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.68□□□□□ -1.66
SYNPO2-206ENST00000610556 Q6ZRU5 148 aa4.68□□□□□ -1.66
SYNPO2-206ENST00000610556 KRTAP1-3Q8IUG1 177 aa4.68□□□□□ -1.66
SYNPO2-206ENST00000610556 Q8N9L7 120 aa4.68□□□□□ -1.66
SYNPO2-206ENST00000610556 RMI2Q96E14 147 aa4.68□□□□□ -1.66
SYNPO2-206ENST00000610556 HIGD2AQ9BW72 106 aa4.68□□□□□ -1.66
SYNPO2-206ENST00000610556 TENM4Q6N022 2769 aa4.68□□□□□ -1.66
SYNPO2-206ENST00000610556 C6orf48Q9UBA6 75 aa4.68□□□□□ -1.66
SYNPO2-206ENST00000610556 A0A096LNI7 61 aa4.67□□□□□ -1.66
SYNPO2-206ENST00000610556 LINC01547P58512 204 aaPredicted RBP4.67□□□□□ -1.66
SYNPO2-206ENST00000610556 MUC7Q8TAX7 377 aa4.67□□□□□ -1.66
SYNPO2-206ENST00000610556 EGFEM1PQ0D2K5 195 aa4.67□□□□□ -1.66
SYNPO2-206ENST00000610556 LINC01561Q8N1V8 128 aa4.67□□□□□ -1.66
SYNPO2-206ENST00000610556 KIAA0087Q14695 138 aa4.66□□□□□ -1.66
SYNPO2-206ENST00000610556 SPATA3Q8NHX4 192 aa4.66□□□□□ -1.66
SYNPO2-206ENST00000610556 CR1P17927 2039 aa4.66□□□□□ -1.66
SYNPO2-206ENST00000610556 CRYGAP11844 174 aa4.66□□□□□ -1.66
SYNPO2-206ENST00000610556 KRTAP10-3P60369 221 aa4.66□□□□□ -1.66
SYNPO2-206ENST00000610556 HRCT1Q6UXD1 115 aa4.66□□□□□ -1.66
SYNPO2-206ENST00000610556 NDUFC2-KCTD14E9PQ53 114 aa4.65□□□□□ -1.66
SYNPO2-206ENST00000610556 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.65□□□□□ -1.66
SYNPO2-206ENST00000610556 MPLKIPQ8TAP9 179 aa4.65□□□□□ -1.66
SYNPO2-206ENST00000610556 TRAV7A0A075B6U4 112 aa4.65□□□□□ -1.67
SYNPO2-206ENST00000610556 Q8NAQ8 132 aa4.65□□□□□ -1.67
SYNPO2-206ENST00000610556 LINC01600Q96MT4 127 aa4.65□□□□□ -1.67
SYNPO2-206ENST00000610556 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
SYNPO2-206ENST00000610556 Q6ZQT0 140 aa4.64□□□□□ -1.67
SYNPO2-206ENST00000610556 APCP25054 2843 aa4.64□□□□□ -1.67
SYNPO2-206ENST00000610556 PRR4Q16378 134 aa4.64□□□□□ -1.67
SYNPO2-206ENST00000610556 ESRGQ1W209 222 aa4.64□□□□□ -1.67
SYNPO2-206ENST00000610556 TRAV10A0A0B4J240 114 aa4.63□□□□□ -1.67
SYNPO2-206ENST00000610556 KRTAP1-1Q07627 177 aa4.63□□□□□ -1.67
SYNPO2-206ENST00000610556 FAM30AQ9NZY2 134 aa4.63□□□□□ -1.67
SYNPO2-206ENST00000610556 M0R2N4 97 aa4.62□□□□□ -1.67
SYNPO2-206ENST00000610556 NBEAL1Q6ZS30 2694 aa4.62□□□□□ -1.67
SYNPO2-206ENST00000610556 LINC00612Q8N6U2 182 aa4.61□□□□□ -1.67
SYNPO2-206ENST00000610556 C1orf137Q5JT78 98 aa4.61□□□□□ -1.67
SYNPO2-206ENST00000610556 WFDC13Q8IUB5 93 aa4.61□□□□□ -1.67
SYNPO2-206ENST00000610556 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
SYNPO2-206ENST00000610556 STAB1Q9NY15 2570 aa4.61□□□□□ -1.67
SYNPO2-206ENST00000610556 LRCOL1A6NCL2 159 aa4.61□□□□□ -1.67
SYNPO2-206ENST00000610556 F8WDY8 70 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms