RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ERG28Q9UKR5 140 aa7.75□□□□□ -1.17
DDX39A-219ENST00000592927 IGLV5-52A0A0A0MRZ9 124 aa7.74□□□□□ -1.17
DDX39A-219ENST00000592927 HIGD2BQ4VC39 106 aa7.74□□□□□ -1.17
DDX39A-219ENST00000592927 ADAMTSL4-AS1Q5T5F5 129 aa7.74□□□□□ -1.17
DDX39A-219ENST00000592927 CAMK2N2Q96S95 79 aa7.74□□□□□ -1.17
DDX39A-219ENST00000592927 A6NDN8 102 aa7.73□□□□□ -1.17
DDX39A-219ENST00000592927 FUSP35637 526 aaKnown RBP eCLIP7.73□□□□□ -1.17
DDX39A-219ENST00000592927 XGP55808 180 aa7.73□□□□□ -1.17
DDX39A-219ENST00000592927 LINC00158P58513 81 aa7.73□□□□□ -1.17
DDX39A-219ENST00000592927 RPL24P83731 157 aaKnown RBP7.73□□□□□ -1.17
DDX39A-219ENST00000592927 BATFQ16520 125 aa7.73□□□□□ -1.17
DDX39A-219ENST00000592927 UNQ6190/PRO20217Q6UXQ8 127 aa7.73□□□□□ -1.17
DDX39A-219ENST00000592927 FXYD2P54710 66 aa7.72□□□□□ -1.17
DDX39A-219ENST00000592927 RNF151Q2KHN1 245 aa7.72□□□□□ -1.17
DDX39A-219ENST00000592927 MUSTN1Q8IVN3 82 aa7.72□□□□□ -1.17
DDX39A-219ENST00000592927 SMR3BP02814 79 aaPredicted RBP7.71□□□□□ -1.18
DDX39A-219ENST00000592927 PFN2P35080 140 aa7.71□□□□□ -1.18
DDX39A-219ENST00000592927 SYCNQ0VAF6 134 aa7.71□□□□□ -1.18
DDX39A-219ENST00000592927 COL5A1-AS1Q5SY13 56 aa7.71□□□□□ -1.18
DDX39A-219ENST00000592927 MIR7-3HGQ8N6C7 128 aa7.71□□□□□ -1.18
DDX39A-219ENST00000592927 LINC00308Q8TCZ7 52 aa7.71□□□□□ -1.18
DDX39A-219ENST00000592927 LINC00526Q96FQ7 95 aa7.71□□□□□ -1.18
DDX39A-219ENST00000592927 PLA2G2DQ9UNK4 145 aa7.71□□□□□ -1.18
DDX39A-219ENST00000592927 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.7□□□□□ -1.18
DDX39A-219ENST00000592927 A0A0U1RRA0 63 aa7.7□□□□□ -1.18
DDX39A-219ENST00000592927 C10orf25Q5T742 122 aa7.7□□□□□ -1.18
DDX39A-219ENST00000592927 C6orf48Q9UBA6 75 aa7.7□□□□□ -1.18
DDX39A-219ENST00000592927 LOC107984156A0A0G2JMH3 177 aa7.69□□□□□ -1.18
DDX39A-219ENST00000592927 A0A1B0GWB2 263 aa7.69□□□□□ -1.18
DDX39A-219ENST00000592927 CNBPP62633 177 aaKnown RBP7.69□□□□□ -1.18
DDX39A-219ENST00000592927 Q6ZRU5 148 aa7.69□□□□□ -1.18
DDX39A-219ENST00000592927 ARL17AQ8IVW1 177 aa7.69□□□□□ -1.18
DDX39A-219ENST00000592927 DAND5Q8N907 189 aa7.69□□□□□ -1.18
DDX39A-219ENST00000592927 CARD19Q96LW7 228 aa7.69□□□□□ -1.18
DDX39A-219ENST00000592927 RNF213Q63HN8 5207 aa7.68□□□□□ -1.18
DDX39A-219ENST00000592927 A4D1N5 150 aa7.68□□□□□ -1.18
DDX39A-219ENST00000592927 SLPIP03973 132 aa7.68□□□□□ -1.18
DDX39A-219ENST00000592927 C9orf116Q5BN46 136 aaPredicted RBP7.68□□□□□ -1.18
DDX39A-219ENST00000592927 NHP2Q9NX24 153 aaKnown RBP7.68□□□□□ -1.18
DDX39A-219ENST00000592927 KRTAP29-1A8MX34 341 aaPredicted RBP7.67□□□□□ -1.18
DDX39A-219ENST00000592927 NDUFC2-KCTD14E9PQ53 114 aa7.67□□□□□ -1.18
DDX39A-219ENST00000592927 TLX1NBP0CAT3 122 aa7.67□□□□□ -1.18
DDX39A-219ENST00000592927 NPC2P61916 151 aa7.67□□□□□ -1.18
DDX39A-219ENST00000592927 A0A0B4J2C4 111 aa7.66□□□□□ -1.18
DDX39A-219ENST00000592927 FAM229AH3BQW9 127 aa7.66□□□□□ -1.18
DDX39A-219ENST00000592927 LINC01620Q4KN68 170 aa7.66□□□□□ -1.18
DDX39A-219ENST00000592927 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
DDX39A-219ENST00000592927 C9orf163Q8N9P6 203 aa7.66□□□□□ -1.18
DDX39A-219ENST00000592927 CFC1BP0CG36 223 aa7.65□□□□□ -1.18
DDX39A-219ENST00000592927 CFC1P0CG37 223 aa7.65□□□□□ -1.18
DDX39A-219ENST00000592927 KRTAP10-1P60331 282 aa7.65□□□□□ -1.18
DDX39A-219ENST00000592927 SND1-IT1Q9HBX3 110 aa7.65□□□□□ -1.18
DDX39A-219ENST00000592927 PKIGQ9Y2B9 76 aa7.65□□□□□ -1.18
DDX39A-219ENST00000592927 NDUFC2O95298 119 aa7.64□□□□□ -1.19
DDX39A-219ENST00000592927 RAB37Q96AX2 223 aa7.64□□□□□ -1.19
DDX39A-219ENST00000592927 TAX1BP3O14907 124 aa7.63□□□□□ -1.19
DDX39A-219ENST00000592927 EIF4EBP3O60516 100 aaPredicted RBP7.63□□□□□ -1.19
DDX39A-219ENST00000592927 PRO1854Q9UHT4 67 aa7.63□□□□□ -1.19
DDX39A-219ENST00000592927 LOC107984640A0A0U1RRK4 108 aa7.62□□□□□ -1.19
DDX39A-219ENST00000592927 TRAV13-2A0A0B4J235 113 aa7.61□□□□□ -1.19
DDX39A-219ENST00000592927 K7ERJ3 54 aa7.61□□□□□ -1.19
DDX39A-219ENST00000592927 SDIM1Q6ZPB5 146 aa7.61□□□□□ -1.19
DDX39A-219ENST00000592927 C9orf118A6NHY6 69 aa7.6□□□□□ -1.19
DDX39A-219ENST00000592927 Q6ZRP5 223 aa7.6□□□□□ -1.19
DDX39A-219ENST00000592927 RPL18AQ02543 176 aaKnown RBP7.59□□□□□ -1.19
DDX39A-219ENST00000592927 IGKV2-28A0A075B6P5 120 aa7.58□□□□□ -1.2
DDX39A-219ENST00000592927 TRBV10-2A0A0K0K1G8 114 aa7.58□□□□□ -1.2
DDX39A-219ENST00000592927 IGKV2D-28P01615 120 aa7.58□□□□□ -1.2
DDX39A-219ENST00000592927 HAMPP81172 84 aa7.58□□□□□ -1.2
DDX39A-219ENST00000592927 GAGE2EQ4V326 116 aa7.58□□□□□ -1.2
DDX39A-219ENST00000592927 XAGE1AQ9HD64 81 aa7.58□□□□□ -1.2
DDX39A-219ENST00000592927 FAM30AQ9NZY2 134 aa7.58□□□□□ -1.2
DDX39A-219ENST00000592927 GAGE2DQ9UEU5 116 aa7.58□□□□□ -1.2
DDX39A-219ENST00000592927 TSPAN13O95857 204 aa7.57□□□□□ -1.2
DDX39A-219ENST00000592927 DPH3Q96FX2 82 aa7.57□□□□□ -1.2
DDX39A-219ENST00000592927 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
DDX39A-219ENST00000592927 RPL13AP40429 203 aaKnown RBP7.56□□□□□ -1.2
DDX39A-219ENST00000592927 GAGE2BQ13066 116 aa7.56□□□□□ -1.2
DDX39A-219ENST00000592927 C9orf129Q5T035 196 aaKnown RBP7.56□□□□□ -1.2
DDX39A-219ENST00000592927 LYRM7Q5U5X0 104 aa7.56□□□□□ -1.2
DDX39A-219ENST00000592927 Q6ZSA8 131 aa7.56□□□□□ -1.2
DDX39A-219ENST00000592927 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.56□□□□□ -1.2
DDX39A-219ENST00000592927 LRP1Q07954 4544 aaKnown RBP7.55□□□□□ -1.2
DDX39A-219ENST00000592927 A0A096LNI7 61 aa7.55□□□□□ -1.2
DDX39A-219ENST00000592927 H3BUT2 72 aa7.55□□□□□ -1.2
DDX39A-219ENST00000592927 CHTF8P0CG12 524 aa7.55□□□□□ -1.2
DDX39A-219ENST00000592927 Q1RN00 199 aa7.55□□□□□ -1.2
DDX39A-219ENST00000592927 LINC00337Q8N6G1 96 aa7.55□□□□□ -1.2
DDX39A-219ENST00000592927 TMEM126AQ9H061 195 aa7.55□□□□□ -1.2
DDX39A-219ENST00000592927 LINC00474Q9P2X8 69 aa7.55□□□□□ -1.2
DDX39A-219ENST00000592927 A0A1W2PPM0 123 aa7.54□□□□□ -1.2
DDX39A-219ENST00000592927 VPREB1P12018 145 aa7.54□□□□□ -1.2
DDX39A-219ENST00000592927 FABP2P12104 132 aa7.54□□□□□ -1.2
DDX39A-219ENST00000592927 IGLV5-37A0A075B6J1 123 aa7.53□□□□□ -1.2
DDX39A-219ENST00000592927 PANO1I0J062 215 aa7.53□□□□□ -1.2
DDX39A-219ENST00000592927 M0R378 163 aa7.53□□□□□ -1.2
DDX39A-219ENST00000592927 OR13C6PQ8NH95 151 aa7.53□□□□□ -1.2
DDX39A-219ENST00000592927 SPACA4Q8TDM5 124 aa7.53□□□□□ -1.2
DDX39A-219ENST00000592927 CBY1Q9Y3M2 126 aa7.53□□□□□ -1.2
DDX39A-219ENST00000592927 DNAH8Q96JB1 4490 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms