RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 A0A096LPF7 62 aa2.49□□□□□ -2.01
VMP1-216ENST00000592790 ZNF73O43830 326 aaPredicted RBP2.49□□□□□ -2.01
VMP1-216ENST00000592790 EIF4EBP3O60516 100 aaPredicted RBP2.49□□□□□ -2.01
VMP1-216ENST00000592790 EGFEM1PQ0D2K5 195 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 ANKRD11Q6UB99 2663 aaPredicted RBP2.48□□□□□ -2.01
VMP1-216ENST00000592790 PRKDCP78527 4128 aaKnown RBP2.48□□□□□ -2.01
VMP1-216ENST00000592790 NBEAQ8NFP9 2946 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 ERC2-IT1O76042 136 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 C6orf223Q8N319 242 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 SMCR5Q8TEV8 140 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 OBSCN-AS1Q96MR7 158 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 KLK12Q9UKR0 248 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 USP9YO00507 2555 aaPredicted RBP2.48□□□□□ -2.01
VMP1-216ENST00000592790 MED13LQ71F56 2210 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 IGKV2-28A0A075B6P5 120 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 A0A087WVE0 104 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 IGHV4-28A0A0C4DH34 117 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 LOC100131303A0A0U1RQF7 123 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 IGKV2D-28P01615 120 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 LINC00167Q96N53 147 aa2.48□□□□□ -2.01
VMP1-216ENST00000592790 C18orf65Q6ZTR6 163 aa2.47□□□□□ -2.01
VMP1-216ENST00000592790 Q6ZVQ6 151 aa2.47□□□□□ -2.01
VMP1-216ENST00000592790 PRM2P04554 102 aa2.47□□□□□ -2.01
VMP1-216ENST00000592790 LINC01547P58512 204 aaPredicted RBP2.47□□□□□ -2.01
VMP1-216ENST00000592790 BBC3Q96PG8 261 aaPredicted RBP2.47□□□□□ -2.01
VMP1-216ENST00000592790 LINC01006Q8NI28 216 aa2.47□□□□□ -2.01
VMP1-216ENST00000592790 C2orf48Q96LS8 159 aa2.47□□□□□ -2.01
VMP1-216ENST00000592790 IGKV2D-24A0A075B6R9 120 aa2.46□□□□□ -2.01
VMP1-216ENST00000592790 CYSRT1A8MQ03 144 aa2.46□□□□□ -2.01
VMP1-216ENST00000592790 Q6ZQT0 140 aa2.46□□□□□ -2.01
VMP1-216ENST00000592790 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.46□□□□□ -2.01
VMP1-216ENST00000592790 GVQW2A0A096LPI5 108 aaPredicted RBP2.46□□□□□ -2.02
VMP1-216ENST00000592790 DEFB135Q30KP9 77 aa2.46□□□□□ -2.02
VMP1-216ENST00000592790 Q8N3U1 123 aa2.46□□□□□ -2.02
VMP1-216ENST00000592790 CRYBG3Q68DQ2 2970 aa2.46□□□□□ -2.02
VMP1-216ENST00000592790 LINC00482Q8N8I6 264 aa2.46□□□□□ -2.02
VMP1-216ENST00000592790 A0A0J9YWU9 116 aa2.46□□□□□ -2.02
VMP1-216ENST00000592790 PRYO14603 147 aa2.46□□□□□ -2.02
VMP1-216ENST00000592790 CDK2AP2O75956 126 aa2.46□□□□□ -2.02
VMP1-216ENST00000592790 IGHV4-30-4P0DP06 118 aa2.46□□□□□ -2.02
VMP1-216ENST00000592790 VPREB1P12018 145 aa2.46□□□□□ -2.02
VMP1-216ENST00000592790 HILS1P60008 231 aa2.46□□□□□ -2.02
VMP1-216ENST00000592790 ASH1LQ9NR48 2969 aaKnown RBP2.45□□□□□ -2.02
VMP1-216ENST00000592790 UBE2BP63146 152 aa2.45□□□□□ -2.02
VMP1-216ENST00000592790 SYCNQ0VAF6 134 aa2.45□□□□□ -2.02
VMP1-216ENST00000592790 KLKP1Q107X0 134 aa2.45□□□□□ -2.02
VMP1-216ENST00000592790 HRCT1Q6UXD1 115 aa2.45□□□□□ -2.02
VMP1-216ENST00000592790 TMEM254Q8TBM7 123 aa2.45□□□□□ -2.02
VMP1-216ENST00000592790 BRK1Q8WUW1 75 aa2.45□□□□□ -2.02
VMP1-216ENST00000592790 MRPL55Q7Z7F7 128 aaKnown RBP2.45□□□□□ -2.02
VMP1-216ENST00000592790 DEFB105AQ8NG35 78 aa2.45□□□□□ -2.02
VMP1-216ENST00000592790 HECTD4Q9Y4D8 3996 aa2.45□□□□□ -2.02
VMP1-216ENST00000592790 UNQ6190/PRO20217Q6UXQ8 127 aa2.45□□□□□ -2.02
VMP1-216ENST00000592790 FAM104AQ969W3 186 aa2.45□□□□□ -2.02
VMP1-216ENST00000592790 SNURFQ9Y675 71 aa2.45□□□□□ -2.02
VMP1-216ENST00000592790 WFDC9Q8NEX5 89 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 C19orf73Q9NVV2 129 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 Q9UF83 564 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 DMBT1Q9UGM3 2413 aaPredicted RBP2.44□□□□□ -2.02
VMP1-216ENST00000592790 FRAS1Q86XX4 4008 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 H3BNG1 76 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 ELOF1P60002 83 aaKnown RBP2.44□□□□□ -2.02
VMP1-216ENST00000592790 CD164Q04900 197 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 IGLV6-57P01721 117 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 C4orf26Q17RF5 130 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 C14orf177Q52M58 125 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 ZNF843Q8N446 348 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 LINC00612Q8N6U2 182 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 SPATA3Q8NHX4 192 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 MGAM2Q2M2H8 2515 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 PSCAO43653 123 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 LYPD5Q6UWN5 251 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 XAGE1AQ9HD64 81 aa2.44□□□□□ -2.02
VMP1-216ENST00000592790 DYNC2H1Q8NCM8 4307 aaKnown RBP2.43□□□□□ -2.02
VMP1-216ENST00000592790 PRR3P79522 188 aaKnown RBP2.43□□□□□ -2.02
VMP1-216ENST00000592790 ESRGQ1W209 222 aa2.43□□□□□ -2.02
VMP1-216ENST00000592790 C1orf195Q5TG92 126 aa2.43□□□□□ -2.02
VMP1-216ENST00000592790 Q6ZRU5 148 aa2.43□□□□□ -2.02
VMP1-216ENST00000592790 SCXQ7RTU7 201 aa2.43□□□□□ -2.02
VMP1-216ENST00000592790 WFDC10AQ9H1F0 79 aa2.43□□□□□ -2.02
VMP1-216ENST00000592790 MAST4O15021 2626 aa2.43□□□□□ -2.02
VMP1-216ENST00000592790 OXTP01178 125 aa2.43□□□□□ -2.02
VMP1-216ENST00000592790 LORP23490 312 aaPredicted RBP2.43□□□□□ -2.02
VMP1-216ENST00000592790 POLQO75417 2590 aa2.42□□□□□ -2.02
VMP1-216ENST00000592790 A0A096LNT2 108 aa2.42□□□□□ -2.02
VMP1-216ENST00000592790 C9orf116Q5BN46 136 aaPredicted RBP2.42□□□□□ -2.02
VMP1-216ENST00000592790 CSNK1G2-AS1Q8NCQ2 148 aa2.42□□□□□ -2.02
VMP1-216ENST00000592790 RPL37AP8A6NKH3 93 aa2.42□□□□□ -2.02
VMP1-216ENST00000592790 H3BPC8 53 aa2.42□□□□□ -2.02
VMP1-216ENST00000592790 UBE2DNLQ8IWF7 75 aa2.42□□□□□ -2.02
VMP1-216ENST00000592790 ESM1Q9NQ30 184 aa2.42□□□□□ -2.02
VMP1-216ENST00000592790 CEP295Q9C0D2 2601 aa2.42□□□□□ -2.02
VMP1-216ENST00000592790 PLA2G1BP04054 148 aaKnown RBP2.42□□□□□ -2.02
VMP1-216ENST00000592790 C1orf137Q5JT78 98 aa2.42□□□□□ -2.02
VMP1-216ENST00000592790 KPRPQ5T749 579 aaPredicted RBP2.42□□□□□ -2.02
VMP1-216ENST00000592790 WFDC11Q8NEX6 87 aa2.42□□□□□ -2.02
VMP1-216ENST00000592790 HELZ2Q9BYK8 2649 aaKnown RBP2.42□□□□□ -2.02
VMP1-216ENST00000592790 PLAC8L1A1L4L8 177 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 C3orf84H3BNL1 204 aa2.41□□□□□ -2.02
VMP1-216ENST00000592790 KIAA0087Q14695 138 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms