RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 PSMB2P49721 201 aa6.21□□□□□ -1.42
VPS25-205ENST00000590339 C9orf116Q5BN46 136 aaPredicted RBP6.21□□□□□ -1.42
VPS25-205ENST00000590339 LINC00337Q8N6G1 96 aa6.21□□□□□ -1.42
VPS25-205ENST00000590339 LINC00526Q96FQ7 95 aa6.21□□□□□ -1.42
VPS25-205ENST00000590339 C6orf48Q9UBA6 75 aa6.21□□□□□ -1.42
VPS25-205ENST00000590339 F8W1H4 67 aa6.2□□□□□ -1.42
VPS25-205ENST00000590339 C1orf134Q5TEV5 83 aa6.2□□□□□ -1.42
VPS25-205ENST00000590339 Q6ZR54 194 aa6.2□□□□□ -1.42
VPS25-205ENST00000590339 RPL28P46779 137 aaKnown RBP6.19□□□□□ -1.42
VPS25-205ENST00000590339 HIGD2BQ4VC39 106 aa6.19□□□□□ -1.42
VPS25-205ENST00000590339 RMI2Q96E14 147 aa6.19□□□□□ -1.42
VPS25-205ENST00000590339 LINC01600Q96MT4 127 aa6.19□□□□□ -1.42
VPS25-205ENST00000590339 Q9HAA7 133 aa6.19□□□□□ -1.42
VPS25-205ENST00000590339 ZNF561-AS1K7EIQ3 104 aa6.18□□□□□ -1.42
VPS25-205ENST00000590339 LST1O00453 97 aa6.18□□□□□ -1.42
VPS25-205ENST00000590339 SCGB1C2P0DMR2 95 aa6.18□□□□□ -1.42
VPS25-205ENST00000590339 SMCPP49901 116 aaPredicted RBP6.18□□□□□ -1.42
VPS25-205ENST00000590339 ATXN8Q156A1 80 aa6.18□□□□□ -1.42
VPS25-205ENST00000590339 Q6ZRU5 148 aa6.18□□□□□ -1.42
VPS25-205ENST00000590339 Q8NDZ9 215 aa6.18□□□□□ -1.42
VPS25-205ENST00000590339 KRTAP1-5Q9BYS1 174 aa6.18□□□□□ -1.42
VPS25-205ENST00000590339 FRAS1Q86XX4 4008 aa6.17□□□□□ -1.42
VPS25-205ENST00000590339 NBDYA0A0U1RRE5 68 aa6.17□□□□□ -1.42
VPS25-205ENST00000590339 A0A1B0GVY2 172 aa6.17□□□□□ -1.42
VPS25-205ENST00000590339 M0QXV9 152 aa6.17□□□□□ -1.42
VPS25-205ENST00000590339 COX6CP09669 75 aa6.17□□□□□ -1.42
VPS25-205ENST00000590339 LINC01620Q4KN68 170 aa6.17□□□□□ -1.42
VPS25-205ENST00000590339 CAMK2N2Q96S95 79 aa6.17□□□□□ -1.42
VPS25-205ENST00000590339 WFDC2Q14508 124 aa6.16□□□□□ -1.42
VPS25-205ENST00000590339 MTURNQ8N3F0 131 aa6.16□□□□□ -1.42
VPS25-205ENST00000590339 DNAH6Q9C0G6 4158 aa6.15□□□□□ -1.42
VPS25-205ENST00000590339 USP17L23D6RBM5 183 aa6.15□□□□□ -1.42
VPS25-205ENST00000590339 TNP2Q05952 138 aa6.15□□□□□ -1.42
VPS25-205ENST00000590339 RNF151Q2KHN1 245 aa6.15□□□□□ -1.42
VPS25-205ENST00000590339 OCIAD2Q56VL3 154 aa6.15□□□□□ -1.42
VPS25-205ENST00000590339 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.42
VPS25-205ENST00000590339 CLEC2BQ92478 149 aa6.15□□□□□ -1.42
VPS25-205ENST00000590339 TRBV10-2A0A0K0K1G8 114 aa6.14□□□□□ -1.43
VPS25-205ENST00000590339 TLX1NBP0CAT3 122 aa6.14□□□□□ -1.43
VPS25-205ENST00000590339 SYCNQ0VAF6 134 aa6.14□□□□□ -1.43
VPS25-205ENST00000590339 DNAH2Q9P225 4427 aa6.13□□□□□ -1.43
VPS25-205ENST00000590339 C9JAW5 83 aa6.13□□□□□ -1.43
VPS25-205ENST00000590339 NDUFC2-KCTD14E9PQ53 114 aa6.13□□□□□ -1.43
VPS25-205ENST00000590339 SLC25A20O43772 301 aa6.13□□□□□ -1.43
VPS25-205ENST00000590339 TRACP01848 142 aa6.13□□□□□ -1.43
VPS25-205ENST00000590339 CARD19Q96LW7 228 aa6.13□□□□□ -1.43
VPS25-205ENST00000590339 H3BT86 120 aa6.12□□□□□ -1.43
VPS25-205ENST00000590339 NCR3O14931 201 aa6.12□□□□□ -1.43
VPS25-205ENST00000590339 SLPIP03973 132 aa6.12□□□□□ -1.43
VPS25-205ENST00000590339 VPREB1P12018 145 aa6.12□□□□□ -1.43
VPS25-205ENST00000590339 ETDBQ3ZM63 59 aa6.12□□□□□ -1.43
VPS25-205ENST00000590339 FAM218AQ96MZ4 157 aa6.12□□□□□ -1.43
VPS25-205ENST00000590339 TMEM126AQ9H061 195 aa6.12□□□□□ -1.43
VPS25-205ENST00000590339 KIAA1109Q2LD37 5005 aa6.12□□□□□ -1.43
VPS25-205ENST00000590339 IGLV6-57P01721 117 aa6.11□□□□□ -1.43
VPS25-205ENST00000590339 PRR3P79522 188 aaKnown RBP6.11□□□□□ -1.43
VPS25-205ENST00000590339 TTC32Q5I0X7 151 aa6.11□□□□□ -1.43
VPS25-205ENST00000590339 Q6ZRP5 223 aa6.11□□□□□ -1.43
VPS25-205ENST00000590339 TEN1Q86WV5 123 aa6.11□□□□□ -1.43
VPS25-205ENST00000590339 OR13C6PQ8NH95 151 aa6.11□□□□□ -1.43
VPS25-205ENST00000590339 XAGE1AQ9HD64 81 aa6.11□□□□□ -1.43
VPS25-205ENST00000590339 FAT2Q9NYQ8 4349 aa6.1□□□□□ -1.43
VPS25-205ENST00000590339 DNAH17Q9UFH2 4485 aa6.1□□□□□ -1.43
VPS25-205ENST00000590339 H0YGX0 51 aa6.1□□□□□ -1.43
VPS25-205ENST00000590339 K7ERU9 68 aa6.1□□□□□ -1.43
VPS25-205ENST00000590339 ANKRD29Q8N6D5 301 aa6.1□□□□□ -1.43
VPS25-205ENST00000590339 HERC2O95714 4834 aa6.1□□□□□ -1.43
VPS25-205ENST00000590339 C16orf90A8MZG2 172 aa6.09□□□□□ -1.43
VPS25-205ENST00000590339 RPL18AQ02543 176 aaKnown RBP6.09□□□□□ -1.43
VPS25-205ENST00000590339 C9orf129Q5T035 196 aaKnown RBP6.09□□□□□ -1.43
VPS25-205ENST00000590339 CNBPP62633 177 aaKnown RBP6.08□□□□□ -1.44
VPS25-205ENST00000590339 Q6ZRN7 208 aaPredicted RBP6.08□□□□□ -1.44
VPS25-205ENST00000590339 PPDPFLQ8WWR9 84 aa6.08□□□□□ -1.44
VPS25-205ENST00000590339 LINC00167Q96N53 147 aa6.08□□□□□ -1.44
VPS25-205ENST00000590339 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
VPS25-205ENST00000590339 PLA2G2DQ9UNK4 145 aa6.08□□□□□ -1.44
VPS25-205ENST00000590339 IGLV5-37A0A075B6J1 123 aa6.07□□□□□ -1.44
VPS25-205ENST00000590339 A0A087WYN8 130 aa6.07□□□□□ -1.44
VPS25-205ENST00000590339 A0A1B0GX51 115 aa6.07□□□□□ -1.44
VPS25-205ENST00000590339 LECT2O14960 151 aa6.07□□□□□ -1.44
VPS25-205ENST00000590339 S100A7L2Q5SY68 101 aa6.07□□□□□ -1.44
VPS25-205ENST00000590339 HECTD4Q9Y4D8 3996 aa6.07□□□□□ -1.44
VPS25-205ENST00000590339 DYNC1H1Q14204 4646 aaKnown RBP6.06□□□□□ -1.44
VPS25-205ENST00000590339 TRBV10-3A0A0K0K1G6 114 aa6.06□□□□□ -1.44
VPS25-205ENST00000590339 M0R378 163 aa6.06□□□□□ -1.44
VPS25-205ENST00000590339 FUSP35637 526 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS25-205ENST00000590339 GAGE2EQ4V326 116 aa6.06□□□□□ -1.44
VPS25-205ENST00000590339 C14orf177Q52M58 125 aa6.06□□□□□ -1.44
VPS25-205ENST00000590339 GAGE2DQ9UEU5 116 aa6.06□□□□□ -1.44
VPS25-205ENST00000590339 TRAV23DV6A0A075B6W5 121 aa6.05□□□□□ -1.44
VPS25-205ENST00000590339 LOC107984640A0A0U1RRK4 108 aa6.05□□□□□ -1.44
VPS25-205ENST00000590339 LRCOL1A6NCL2 159 aa6.05□□□□□ -1.44
VPS25-205ENST00000590339 KRTAP10-2P60368 255 aa6.05□□□□□ -1.44
VPS25-205ENST00000590339 C6orf99Q4VX62 202 aa6.05□□□□□ -1.44
VPS25-205ENST00000590339 C22orf24Q9Y442 160 aa6.05□□□□□ -1.44
VPS25-205ENST00000590339 DNAH11Q96DT5 4516 aa6.05□□□□□ -1.44
VPS25-205ENST00000590339 J3QR89 54 aa6.04□□□□□ -1.44
VPS25-205ENST00000590339 PSCAO43653 123 aa6.04□□□□□ -1.44
VPS25-205ENST00000590339 SERTAD4-AS1Q5TG53 156 aa6.04□□□□□ -1.44
VPS25-205ENST00000590339 TRBV7-6A0A0J9YX20 115 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms